data_6HBM
#
_model_server_result.job_id            KaWBnZqLObDd75lnqddwzw 
_model_server_result.datetime_utc      '2024-11-23 17:40:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hbm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    6HBM 
#
_exptl.entry_id    6HBM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HBM 
_cell.length_a            119.5 
_cell.length_b            119.5 
_cell.length_c            234.77 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HBM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,Q 1 1 
B,K,L,M,N,O,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 37 A GLU 37 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? 
metalc ? metalc2 A OD1 ASP 88 A ASP 88 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
metalc ? metalc3 A OD2 ASP 112 A ASP 112 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? 
metalc ? metalc4 A OE1 GLU 126 A GLU 126 1_555 M ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc5 A ND1 HIS 244 A HIS 244 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc6 A OD1 ASP 245 A ASP 245 1_555 C ZN ZN . A ZN 401 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? 
metalc ? metalc7 A OD2 ASP 245 A ASP 245 1_555 C ZN ZN . A ZN 401 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc8 A OE1 GLU 260 A GLU 260 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? 
metalc ? metalc9 A OE2 GLU 260 A GLU 260 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc10 A OE1 GLU 291 A GLU 291 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? 
metalc ? metalc11 A NE2 HIS 315 A HIS 315 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? 
metalc ? metalc12 A NE2 HIS 316 A HIS 316 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc13 A NE2 HIS 317 A HIS 317 1_555 G ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc14 A NE2 HIS 318 A HIS 318 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? 
metalc ? metalc15 A ND1 HIS 318 A HIS 318 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc16 A NE2 HIS 319 A HIS 319 1_555 G ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
metalc ? metalc17 A NE2 HIS 320 A HIS 320 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? 
metalc ? metalc18 C ZN ZN . A ZN 401 1_555 Q O HOH . A HOH 505 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? 
metalc ? metalc19 C ZN ZN . A ZN 401 1_555 Q O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc20 C ZN ZN . A ZN 401 1_555 Q O HOH . A HOH 506 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc21 D ZN ZN . A ZN 402 1_555 B NE2 HIS 315 B HIS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc22 F ZN ZN . A ZN 404 1_555 B OE1 GLU 126 B GLU 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc23 F ZN ZN . A ZN 404 1_555 R O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc24 G ZN ZN . A ZN 405 1_555 Q O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc25 I ZN ZN . A ZN 407 10_455 B ND1 HIS 319 B HIS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc26 B ND1 HIS 244 B HIS 244 1_555 O ZN ZN . B ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc27 B OD1 ASP 245 B ASP 245 1_555 O ZN ZN . B ZN 405 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc28 B OE1 GLU 260 B GLU 260 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc29 B OE2 GLU 260 B GLU 260 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc30 B OE2 GLU 291 B GLU 291 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? 
metalc ? metalc31 B NE2 HIS 316 B HIS 316 1_555 N ZN ZN . B ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc32 B NE2 HIS 317 B HIS 317 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc33 B ND1 HIS 318 B HIS 318 1_555 M ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc34 B NE2 HIS 318 B HIS 318 1_555 N ZN ZN . B ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
metalc ? metalc35 B NE2 HIS 319 B HIS 319 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc36 B NE2 HIS 320 B HIS 320 1_555 M ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc37 K ZN ZN . B ZN 401 1_555 R O HOH . B HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc38 L ZN ZN . B ZN 402 1_555 R O HOH . B HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc39 N ZN ZN . B ZN 404 1_555 R O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc40 O ZN ZN . B ZN 405 1_555 R O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6HBM 
_atom_sites.fract_transf_matrix[1][1]    0.008368 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008368 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004259 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 2 ZN ZN . 
D 2 ZN A 1 402 3 ZN ZN . 
E 2 ZN A 1 403 8 ZN ZN . 
F 2 ZN A 1 404 9 ZN ZN . 
G 2 ZN A 1 405 10 ZN ZN . 
H 2 ZN A 1 406 22 ZN ZN . 
I 2 ZN A 1 407 23 ZN ZN . 
J 3 AHR A 1 408 1 AHR AHR . 
K 2 ZN B 1 401 7 ZN ZN . 
L 2 ZN B 1 402 11 ZN ZN . 
M 2 ZN B 1 403 13 ZN ZN . 
N 2 ZN B 1 404 14 ZN ZN . 
O 2 ZN B 1 405 19 ZN ZN . 
P 3 AHR B 1 406 2 AHR AHR . 
Q 4 HOH A 1 501 61 HOH HOH . 
Q 4 HOH A 2 502 50 HOH HOH . 
Q 4 HOH A 3 503 62 HOH HOH . 
Q 4 HOH A 4 504 49 HOH HOH . 
Q 4 HOH A 5 505 60 HOH HOH . 
Q 4 HOH A 6 506 22 HOH HOH . 
Q 4 HOH A 7 507 17 HOH HOH . 
Q 4 HOH A 8 508 7 HOH HOH . 
R 4 HOH B 1 501 25 HOH HOH . 
R 4 HOH B 2 502 21 HOH HOH . 
R 4 HOH B 3 503 18 HOH HOH . 
R 4 HOH B 4 504 54 HOH HOH . 
R 4 HOH B 5 505 28 HOH HOH . 
R 4 HOH B 6 506 66 HOH HOH . 
R 4 HOH B 7 507 31 HOH HOH . 
R 4 HOH B 8 508 65 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -42.247 
_atom_site.Cartn_y               19.367 
_atom_site.Cartn_z               18.744 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        63.46 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#