data_6HCO # _model_server_result.job_id uqQSfG0tkkwxtkOzA-dANA _model_server_result.datetime_utc '2024-11-26 13:04:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1003}' # _entry.id 6HCO # _exptl.entry_id 6HCO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 350.429 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'estrone 3-sulfate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HCO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n G NAG 1 G 1 NAG A 1001 NAG 4 n G NAG 2 G 2 NAG A 1002 NAG 4 n H NAG 1 H 1 NAG B 1001 NAG 4 n H NAG 2 H 2 NAG B 1002 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 601 A CYS 592 1_555 A SG CYS 617 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 612 A CYS 603 1_555 F SG CYS 612 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 B SG CYS 23 C CYS 23 1_555 B SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 C SG CYS 22 D CYS 22 1_555 C SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 D SG CYS 23 E CYS 23 1_555 D SG CYS 88 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 E SG CYS 22 F CYS 22 1_555 E SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 F SG CYS 601 B CYS 592 1_555 F SG CYS 617 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale1 A ND2 ASN 605 A ASN 596 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale2 F ND2 ASN 605 B ASN 596 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale3 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale4 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? # _chem_comp.formula 'C18 H22 O5 S' _chem_comp.formula_weight 350.429 _chem_comp.id FY5 _chem_comp.mon_nstd_flag . _chem_comp.name 'estrone 3-sulfate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 S21 FY5 doub 83 n n O23 S21 FY5 doub 84 n n O22 S21 FY5 sing 85 n n S21 O20 FY5 sing 86 n n C17 C16 FY5 doub 87 n y C17 C18 FY5 sing 88 n y O20 C18 FY5 sing 89 n n C16 C15 FY5 sing 90 n y C18 C19 FY5 doub 91 n y C04 C03 FY5 sing 92 n n C04 C05 FY5 sing 93 n n C03 C02 FY5 sing 94 n n C15 C05 FY5 sing 95 n n C15 C14 FY5 doub 96 n y C19 C14 FY5 sing 97 n y C05 C06 FY5 sing 98 n n C14 C13 FY5 sing 99 n n O11 C10 FY5 doub 100 n n C01 C02 FY5 sing 101 n n C02 C10 FY5 sing 102 n n C02 C07 FY5 sing 103 n n C06 C07 FY5 sing 104 n n C06 C12 FY5 sing 105 n n C10 C09 FY5 sing 106 n n C07 C08 FY5 sing 107 n n C13 C12 FY5 sing 108 n n C09 C08 FY5 sing 109 n n C13 H1 FY5 sing 110 n n C13 H2 FY5 sing 111 n n C17 H3 FY5 sing 112 n n C01 H4 FY5 sing 113 n n C01 H5 FY5 sing 114 n n C01 H6 FY5 sing 115 n n C03 H7 FY5 sing 116 n n C03 H8 FY5 sing 117 n n C04 H9 FY5 sing 118 n n C04 H10 FY5 sing 119 n n C05 H11 FY5 sing 120 n n C06 H12 FY5 sing 121 n n C07 H13 FY5 sing 122 n n C08 H14 FY5 sing 123 n n C08 H15 FY5 sing 124 n n C09 H16 FY5 sing 125 n n C09 H17 FY5 sing 126 n n C12 H18 FY5 sing 127 n n C12 H19 FY5 sing 128 n n C16 H20 FY5 sing 129 n n C19 H21 FY5 sing 130 n n O22 H22 FY5 sing 131 n n # _atom_sites.entry_id 6HCO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id I _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id FY5 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1003 _pdbx_nonpoly_scheme.auth_seq_num 2 _pdbx_nonpoly_scheme.pdb_mon_id FY5 _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 FY5 . . . I 5 151.536 153.089 149.666 1 118.32 ? C10 FY5 1003 A 1 HETATM 2 C C13 FY5 . . . I 5 157.259 155.228 150.236 1 118.32 ? C13 FY5 1003 A 1 HETATM 3 C C15 FY5 . . . I 5 156.495 154.984 147.767 1 118.32 ? C15 FY5 1003 A 1 HETATM 4 C C17 FY5 . . . I 5 157.847 155.661 145.909 1 118.32 ? C17 FY5 1003 A 1 HETATM 5 C C01 FY5 . . . I 5 153.589 152.031 149.094 1 118.32 ? C01 FY5 1003 A 1 HETATM 6 C C02 FY5 . . . I 5 152.728 153.284 149.114 1 118.32 ? C02 FY5 1003 A 1 HETATM 7 C C03 FY5 . . . I 5 152.649 153.858 147.707 1 118.32 ? C03 FY5 1003 A 1 HETATM 8 C C04 FY5 . . . I 5 154.043 154.329 147.2 1 118.32 ? C04 FY5 1003 A 1 HETATM 9 C C05 FY5 . . . I 5 155.237 154.371 148.362 1 118.32 ? C05 FY5 1003 A 1 HETATM 10 C C06 FY5 . . . I 5 154.759 155.023 149.614 1 118.32 ? C06 FY5 1003 A 1 HETATM 11 C C07 FY5 . . . I 5 153.438 154.36 150.144 1 118.32 ? C07 FY5 1003 A 1 HETATM 12 C C08 FY5 . . . I 5 153.264 153.717 151.372 1 118.32 ? C08 FY5 1003 A 1 HETATM 13 C C09 FY5 . . . I 5 151.783 153.103 151.201 1 118.32 ? C09 FY5 1003 A 1 HETATM 14 C C12 FY5 . . . I 5 155.791 154.99 150.724 1 118.32 ? C12 FY5 1003 A 1 HETATM 15 C C14 FY5 . . . I 5 157.464 155.384 148.656 1 118.32 ? C14 FY5 1003 A 1 HETATM 16 C C16 FY5 . . . I 5 156.668 155.107 146.389 1 118.32 ? C16 FY5 1003 A 1 HETATM 17 C C18 FY5 . . . I 5 158.838 156.072 146.798 1 118.32 ? C18 FY5 1003 A 1 HETATM 18 C C19 FY5 . . . I 5 158.653 155.937 148.171 1 118.32 ? C19 FY5 1003 A 1 HETATM 19 O O11 FY5 . . . I 5 150.519 152.932 149.092 1 118.32 ? O11 FY5 1003 A 1 HETATM 20 O O20 FY5 . . . I 5 160.03 156.629 146.335 1 118.32 ? O20 FY5 1003 A 1 HETATM 21 O O22 FY5 . . . I 5 161.77 156.828 144.454 1 118.32 ? O22 FY5 1003 A 1 HETATM 22 O O23 FY5 . . . I 5 159.941 158.108 144.19 1 118.32 ? O23 FY5 1003 A 1 HETATM 23 O O24 FY5 . . . I 5 159.637 155.698 143.89 1 118.32 -1 O24 FY5 1003 A 1 HETATM 24 S S21 FY5 . . . I 5 160.3 156.76 144.719 1 118.32 ? S21 FY5 1003 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #