data_6HDW # _model_server_result.job_id 5X-cBhlYythPeNrDbLSggA _model_server_result.datetime_utc '2024-11-23 07:37:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hdw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1003}' # _entry.id 6HDW # _exptl.entry_id 6HDW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HDW _cell.length_a 83.871 _cell.length_b 83.871 _cell.length_c 219.811 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HDW _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 341 n n S O2 SO4 doub 342 n n S O3 SO4 sing 343 n n S O4 SO4 sing 344 n n # _atom_sites.entry_id 6HDW _atom_sites.fract_transf_matrix[1][1] 0.011923 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8LE A 1 1001 1001 8LE 8LE . C 3 SO4 A 1 1002 1002 SO4 SO4 . D 3 SO4 A 1 1003 1003 SO4 SO4 . E 3 SO4 A 1 1004 1004 SO4 SO4 . F 4 HOH A 1 1101 1101 HOH HOH . F 4 HOH A 2 1102 1102 HOH HOH . F 4 HOH A 3 1103 1103 HOH HOH . F 4 HOH A 4 1104 1104 HOH HOH . F 4 HOH A 5 1105 1105 HOH HOH . F 4 HOH A 6 1106 1106 HOH HOH . F 4 HOH A 7 1107 1107 HOH HOH . F 4 HOH A 8 1108 1108 HOH HOH . F 4 HOH A 9 1109 1109 HOH HOH . F 4 HOH A 10 1110 1110 HOH HOH . F 4 HOH A 11 1111 1111 HOH HOH . F 4 HOH A 12 1112 1112 HOH HOH . F 4 HOH A 13 1113 1113 HOH HOH . F 4 HOH A 14 1114 1114 HOH HOH . F 4 HOH A 15 1115 1115 HOH HOH . F 4 HOH A 16 1116 1116 HOH HOH . F 4 HOH A 17 1117 1117 HOH HOH . F 4 HOH A 18 1118 1118 HOH HOH . F 4 HOH A 19 1119 1119 HOH HOH . F 4 HOH A 20 1120 1120 HOH HOH . F 4 HOH A 21 1121 1121 HOH HOH . F 4 HOH A 22 1122 1122 HOH HOH . F 4 HOH A 23 1123 1123 HOH HOH . F 4 HOH A 24 1124 1124 HOH HOH . F 4 HOH A 25 1125 1125 HOH HOH . F 4 HOH A 26 1126 1126 HOH HOH . F 4 HOH A 27 1127 1127 HOH HOH . F 4 HOH A 28 1128 1128 HOH HOH . F 4 HOH A 29 1129 1129 HOH HOH . F 4 HOH A 30 1130 1130 HOH HOH . F 4 HOH A 31 1131 1131 HOH HOH . F 4 HOH A 32 1132 1132 HOH HOH . F 4 HOH A 33 1133 1133 HOH HOH . F 4 HOH A 34 1134 1134 HOH HOH . F 4 HOH A 35 1135 1135 HOH HOH . F 4 HOH A 36 1136 1136 HOH HOH . F 4 HOH A 37 1137 1137 HOH HOH . F 4 HOH A 38 1138 1138 HOH HOH . F 4 HOH A 39 1139 1139 HOH HOH . F 4 HOH A 40 1140 1140 HOH HOH . F 4 HOH A 41 1141 1141 HOH HOH . F 4 HOH A 42 1142 1142 HOH HOH . F 4 HOH A 43 1143 1143 HOH HOH . F 4 HOH A 44 1144 1144 HOH HOH . F 4 HOH A 45 1145 1145 HOH HOH . F 4 HOH A 46 1146 1146 HOH HOH . F 4 HOH A 47 1147 1147 HOH HOH . F 4 HOH A 48 1148 1148 HOH HOH . F 4 HOH A 49 1149 1149 HOH HOH . F 4 HOH A 50 1150 1150 HOH HOH . F 4 HOH A 51 1151 1151 HOH HOH . F 4 HOH A 52 1152 1152 HOH HOH . F 4 HOH A 53 1153 1153 HOH HOH . F 4 HOH A 54 1154 1154 HOH HOH . F 4 HOH A 55 1155 1155 HOH HOH . F 4 HOH A 56 1156 1156 HOH HOH . F 4 HOH A 57 1157 1157 HOH HOH . F 4 HOH A 58 1158 1158 HOH HOH . F 4 HOH A 59 1159 1159 HOH HOH . F 4 HOH A 60 1160 1160 HOH HOH . F 4 HOH A 61 1161 1161 HOH HOH . F 4 HOH A 62 1162 1162 HOH HOH . F 4 HOH A 63 1163 1163 HOH HOH . F 4 HOH A 64 1164 1164 HOH HOH . F 4 HOH A 65 1165 1165 HOH HOH . F 4 HOH A 66 1166 1166 HOH HOH . F 4 HOH A 67 1167 1167 HOH HOH . F 4 HOH A 68 1168 1168 HOH HOH . F 4 HOH A 69 1169 1169 HOH HOH . F 4 HOH A 70 1170 1170 HOH HOH . F 4 HOH A 71 1171 1171 HOH HOH . F 4 HOH A 72 1172 1172 HOH HOH . F 4 HOH A 73 1173 1173 HOH HOH . F 4 HOH A 74 1174 1174 HOH HOH . F 4 HOH A 75 1175 1175 HOH HOH . F 4 HOH A 76 1176 1176 HOH HOH . F 4 HOH A 77 1177 1177 HOH HOH . F 4 HOH A 78 1178 1178 HOH HOH . F 4 HOH A 79 1179 1179 HOH HOH . F 4 HOH A 80 1180 1180 HOH HOH . F 4 HOH A 81 1181 1181 HOH HOH . F 4 HOH A 82 1182 1182 HOH HOH . F 4 HOH A 83 1183 1183 HOH HOH . F 4 HOH A 84 1184 1184 HOH HOH . F 4 HOH A 85 1185 1185 HOH HOH . F 4 HOH A 86 1186 1186 HOH HOH . F 4 HOH A 87 1187 1187 HOH HOH . F 4 HOH A 88 1188 1188 HOH HOH . F 4 HOH A 89 1189 1189 HOH HOH . F 4 HOH A 90 1190 1190 HOH HOH . F 4 HOH A 91 1191 1191 HOH HOH . F 4 HOH A 92 1192 1192 HOH HOH . F 4 HOH A 93 1193 1193 HOH HOH . F 4 HOH A 94 1194 1194 HOH HOH . F 4 HOH A 95 1195 1195 HOH HOH . F 4 HOH A 96 1196 1196 HOH HOH . F 4 HOH A 97 1197 1197 HOH HOH . F 4 HOH A 98 1198 1198 HOH HOH . F 4 HOH A 99 1199 1199 HOH HOH . F 4 HOH A 100 1200 1200 HOH HOH . F 4 HOH A 101 1201 1201 HOH HOH . F 4 HOH A 102 1202 1202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -13.082 -52.94 -13.288 1 81.74 ? S SO4 1003 A 1 HETATM 2 O O1 SO4 . . . D 3 -12.67 -54.345 -13.286 1 83.2 ? O1 SO4 1003 A 1 HETATM 3 O O2 SO4 . . . D 3 -12.561 -52.276 -14.49 1 82.61 ? O2 SO4 1003 A 1 HETATM 4 O O3 SO4 . . . D 3 -14.553 -52.858 -13.267 1 79.83 ? O3 SO4 1003 A 1 HETATM 5 O O4 SO4 . . . D 3 -12.502 -52.298 -12.106 1 82.04 ? O4 SO4 1003 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #