data_6HDY
#
_model_server_result.job_id            3x_Lcsun4zZoQQ1fVWwUNA 
_model_server_result.datetime_utc      '2024-11-26 22:42:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hdy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6HDY 
#
_exptl.entry_id    6HDY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              104.105 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S)-3-HYDROXYBUTANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HDY 
_cell.length_a            84.19 
_cell.length_b            84.19 
_cell.length_c            219.81 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HDY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H8 O3' 
_chem_comp.formula_weight    104.105 
_chem_comp.id                3HL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S)-3-HYDROXYBUTANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CA CB 3HL sing 1 n n 
CA C 3HL sing 2 n n 
CA HA1 3HL sing 3 n n 
CA HA2 3HL sing 4 n n 
CB OG1 3HL sing 5 n n 
CB CG2 3HL sing 6 n n 
CB HB 3HL sing 7 n n 
OG1 HOG1 3HL sing 8 n n 
CG2 HG21 3HL sing 9 n n 
CG2 HG22 3HL sing 10 n n 
CG2 HG23 3HL sing 11 n n 
C OA 3HL doub 12 n n 
C OB 3HL sing 13 n n 
OB HOB 3HL sing 14 n n 
#
_atom_sites.entry_id                     6HDY 
_atom_sites.fract_transf_matrix[1][1]    0.011878 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011878 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 3HL A 1 501 501 3HL 3HL . 
C 3 8LQ A 1 502 502 8LQ 8LQ . 
D 4 SO4 A 1 503 503 SO4 SO4 . 
E 4 SO4 A 1 504 504 SO4 SO4 . 
F 4 SO4 A 1 505 505 SO4 SO4 . 
G 5 HOH A 1 601 601 HOH HOH . 
G 5 HOH A 2 602 602 HOH HOH . 
G 5 HOH A 3 603 603 HOH HOH . 
G 5 HOH A 4 604 604 HOH HOH . 
G 5 HOH A 5 605 605 HOH HOH . 
G 5 HOH A 6 606 606 HOH HOH . 
G 5 HOH A 7 607 607 HOH HOH . 
G 5 HOH A 8 608 608 HOH HOH . 
G 5 HOH A 9 609 609 HOH HOH . 
G 5 HOH A 10 610 610 HOH HOH . 
G 5 HOH A 11 611 611 HOH HOH . 
G 5 HOH A 12 612 612 HOH HOH . 
G 5 HOH A 13 613 613 HOH HOH . 
G 5 HOH A 14 614 614 HOH HOH . 
G 5 HOH A 15 615 615 HOH HOH . 
G 5 HOH A 16 616 616 HOH HOH . 
G 5 HOH A 17 617 617 HOH HOH . 
G 5 HOH A 18 618 618 HOH HOH . 
G 5 HOH A 19 619 619 HOH HOH . 
G 5 HOH A 20 620 620 HOH HOH . 
G 5 HOH A 21 621 621 HOH HOH . 
G 5 HOH A 22 622 622 HOH HOH . 
G 5 HOH A 23 623 623 HOH HOH . 
G 5 HOH A 24 624 624 HOH HOH . 
G 5 HOH A 25 625 625 HOH HOH . 
G 5 HOH A 26 626 626 HOH HOH . 
G 5 HOH A 27 627 627 HOH HOH . 
G 5 HOH A 28 628 628 HOH HOH . 
G 5 HOH A 29 629 629 HOH HOH . 
G 5 HOH A 30 630 630 HOH HOH . 
G 5 HOH A 31 631 631 HOH HOH . 
G 5 HOH A 32 632 632 HOH HOH . 
G 5 HOH A 33 633 633 HOH HOH . 
G 5 HOH A 34 634 634 HOH HOH . 
G 5 HOH A 35 635 635 HOH HOH . 
G 5 HOH A 36 636 636 HOH HOH . 
G 5 HOH A 37 637 637 HOH HOH . 
G 5 HOH A 38 638 638 HOH HOH . 
G 5 HOH A 39 639 639 HOH HOH . 
G 5 HOH A 40 640 640 HOH HOH . 
G 5 HOH A 41 641 641 HOH HOH . 
G 5 HOH A 42 642 642 HOH HOH . 
G 5 HOH A 43 643 643 HOH HOH . 
G 5 HOH A 44 644 644 HOH HOH . 
G 5 HOH A 45 645 645 HOH HOH . 
G 5 HOH A 46 646 646 HOH HOH . 
G 5 HOH A 47 647 647 HOH HOH . 
G 5 HOH A 48 648 648 HOH HOH . 
G 5 HOH A 49 649 649 HOH HOH . 
G 5 HOH A 50 650 650 HOH HOH . 
G 5 HOH A 51 651 651 HOH HOH . 
G 5 HOH A 52 652 652 HOH HOH . 
G 5 HOH A 53 653 653 HOH HOH . 
G 5 HOH A 54 654 654 HOH HOH . 
G 5 HOH A 55 655 655 HOH HOH . 
G 5 HOH A 56 656 656 HOH HOH . 
G 5 HOH A 57 657 657 HOH HOH . 
G 5 HOH A 58 658 658 HOH HOH . 
G 5 HOH A 59 659 659 HOH HOH . 
G 5 HOH A 60 660 660 HOH HOH . 
G 5 HOH A 61 661 661 HOH HOH . 
G 5 HOH A 62 662 662 HOH HOH . 
G 5 HOH A 63 663 663 HOH HOH . 
G 5 HOH A 64 664 664 HOH HOH . 
G 5 HOH A 65 665 665 HOH HOH . 
G 5 HOH A 66 666 666 HOH HOH . 
G 5 HOH A 67 667 667 HOH HOH . 
G 5 HOH A 68 668 668 HOH HOH . 
G 5 HOH A 69 669 669 HOH HOH . 
G 5 HOH A 70 670 670 HOH HOH . 
G 5 HOH A 71 671 671 HOH HOH . 
G 5 HOH A 72 672 672 HOH HOH . 
G 5 HOH A 73 673 673 HOH HOH . 
G 5 HOH A 74 674 674 HOH HOH . 
G 5 HOH A 75 675 675 HOH HOH . 
G 5 HOH A 76 676 676 HOH HOH . 
G 5 HOH A 77 677 677 HOH HOH . 
G 5 HOH A 78 678 678 HOH HOH . 
G 5 HOH A 79 679 679 HOH HOH . 
G 5 HOH A 80 680 680 HOH HOH . 
G 5 HOH A 81 681 681 HOH HOH . 
G 5 HOH A 82 682 682 HOH HOH . 
G 5 HOH A 83 683 683 HOH HOH . 
G 5 HOH A 84 684 684 HOH HOH . 
G 5 HOH A 85 685 685 HOH HOH . 
G 5 HOH A 86 686 686 HOH HOH . 
G 5 HOH A 87 687 687 HOH HOH . 
G 5 HOH A 88 688 688 HOH HOH . 
G 5 HOH A 89 689 689 HOH HOH . 
G 5 HOH A 90 690 690 HOH HOH . 
G 5 HOH A 91 691 691 HOH HOH . 
G 5 HOH A 92 692 692 HOH HOH . 
G 5 HOH A 93 693 693 HOH HOH . 
G 5 HOH A 94 694 694 HOH HOH . 
G 5 HOH A 95 695 695 HOH HOH . 
G 5 HOH A 96 696 696 HOH HOH . 
G 5 HOH A 97 697 697 HOH HOH . 
G 5 HOH A 98 698 698 HOH HOH . 
G 5 HOH A 99 699 699 HOH HOH . 
G 5 HOH A 100 700 700 HOH HOH . 
G 5 HOH A 101 701 701 HOH HOH . 
G 5 HOH A 102 702 702 HOH HOH . 
G 5 HOH A 103 703 703 HOH HOH . 
G 5 HOH A 104 704 704 HOH HOH . 
G 5 HOH A 105 705 705 HOH HOH . 
G 5 HOH A 106 706 706 HOH HOH . 
G 5 HOH A 107 707 707 HOH HOH . 
G 5 HOH A 108 708 708 HOH HOH . 
G 5 HOH A 109 709 709 HOH HOH . 
G 5 HOH A 110 710 710 HOH HOH . 
G 5 HOH A 111 711 711 HOH HOH . 
G 5 HOH A 112 712 712 HOH HOH . 
G 5 HOH A 113 713 713 HOH HOH . 
G 5 HOH A 114 714 714 HOH HOH . 
G 5 HOH A 115 715 715 HOH HOH . 
G 5 HOH A 116 716 716 HOH HOH . 
G 5 HOH A 117 717 717 HOH HOH . 
G 5 HOH A 118 718 718 HOH HOH . 
G 5 HOH A 119 719 719 HOH HOH . 
G 5 HOH A 120 720 720 HOH HOH . 
G 5 HOH A 121 721 721 HOH HOH . 
G 5 HOH A 122 722 722 HOH HOH . 
G 5 HOH A 123 723 723 HOH HOH . 
G 5 HOH A 124 724 724 HOH HOH . 
G 5 HOH A 125 725 725 HOH HOH . 
G 5 HOH A 126 726 726 HOH HOH . 
G 5 HOH A 127 727 727 HOH HOH . 
G 5 HOH A 128 728 728 HOH HOH . 
G 5 HOH A 129 729 729 HOH HOH . 
G 5 HOH A 130 730 730 HOH HOH . 
G 5 HOH A 131 731 731 HOH HOH . 
G 5 HOH A 132 732 732 HOH HOH . 
G 5 HOH A 133 733 733 HOH HOH . 
G 5 HOH A 134 734 734 HOH HOH . 
G 5 HOH A 135 735 735 HOH HOH . 
G 5 HOH A 136 736 736 HOH HOH . 
G 5 HOH A 137 737 737 HOH HOH . 
G 5 HOH A 138 738 738 HOH HOH . 
G 5 HOH A 139 739 739 HOH HOH . 
G 5 HOH A 140 740 740 HOH HOH . 
G 5 HOH A 141 741 741 HOH HOH . 
G 5 HOH A 142 742 742 HOH HOH . 
G 5 HOH A 143 743 743 HOH HOH . 
G 5 HOH A 144 744 744 HOH HOH . 
G 5 HOH A 145 745 745 HOH HOH . 
G 5 HOH A 146 746 746 HOH HOH . 
G 5 HOH A 147 747 747 HOH HOH . 
G 5 HOH A 148 748 748 HOH HOH . 
G 5 HOH A 149 749 749 HOH HOH . 
G 5 HOH A 150 750 750 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CA 3HL . A . B 2 -19.065 -39.316 5.816 0.5 32.78 ? CA 3HL 501 A 1 
HETATM 2 C CB 3HL . A . B 2 -19.945 -39.704 4.606 0.5 30.99 ? CB 3HL 501 A 1 
HETATM 3 O OG1 3HL . A . B 2 -21.136 -40.394 4.97 0.5 33.96 ? OG1 3HL 501 A 1 
HETATM 4 C CG2 3HL . A . B 2 -20.371 -38.501 3.82 0.5 26.64 ? CG2 3HL 501 A 1 
HETATM 5 C C 3HL . A . B 2 -19.763 -39.749 7.082 0.5 31.86 ? C 3HL 501 A 1 
HETATM 6 O OA 3HL . A . B 2 -20.809 -39.202 7.402 0.5 33.11 ? OA 3HL 501 A 1 
HETATM 7 O OB 3HL . A . B 2 -19.264 -40.865 7.672 0.5 31.99 ? OB 3HL 501 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           7 
#