data_6HE1
#
_model_server_result.job_id            qZemuMGyOKEtMpVhv-M5EQ 
_model_server_result.datetime_utc      '2024-11-24 15:02:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6he1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":502}' 
#
_entry.id    6HE1 
#
_exptl.entry_id    6HE1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.83 
_cell.angle_gamma         90 
_cell.entry_id            6HE1 
_cell.length_a            149.948 
_cell.length_b            121.841 
_cell.length_c            65.281 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HE1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 351 A GLU 351 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc2 A OG SER 354 A SER 354 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc3 F O2S FZT . A FZT 504 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
metalc ? metalc4 G NA NA . A NA 505 1_555 M O HOH . A HOH 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc5 B OE1 GLU 351 B GLU 351 1_555 L NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc6 B OG SER 354 B SER 354 1_555 L NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.056 ? 
metalc ? metalc7 K O2S FZT . B FZT 504 1_555 L NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc8 L NA NA . B NA 505 1_555 N O HOH . B HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6HE1 
_atom_sites.fract_transf_matrix[1][1]    0.006669 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002946 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008207 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016746 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 501 1 EDO EDO . 
D 2 EDO A 1 502 3 EDO EDO . 
E 2 EDO A 1 503 6 EDO EDO . 
F 3 FZT A 1 504 2 FZT S3U . 
G 4 NA A 1 505 1 NA NA . 
H 2 EDO B 1 501 4 EDO EDO . 
I 2 EDO B 1 502 5 EDO EDO . 
J 2 EDO B 1 503 7 EDO EDO . 
K 3 FZT B 1 504 1 FZT S3U . 
L 4 NA B 1 505 3 NA NA . 
M 5 HOH A 1 601 79 HOH HOH . 
M 5 HOH A 2 602 103 HOH HOH . 
M 5 HOH A 3 603 9 HOH HOH . 
M 5 HOH A 4 604 4 HOH HOH . 
M 5 HOH A 5 605 16 HOH HOH . 
M 5 HOH A 6 606 40 HOH HOH . 
M 5 HOH A 7 607 75 HOH HOH . 
M 5 HOH A 8 608 138 HOH HOH . 
M 5 HOH A 9 609 24 HOH HOH . 
M 5 HOH A 10 610 167 HOH HOH . 
M 5 HOH A 11 611 5 HOH HOH . 
M 5 HOH A 12 612 44 HOH HOH . 
M 5 HOH A 13 613 27 HOH HOH . 
M 5 HOH A 14 614 59 HOH HOH . 
M 5 HOH A 15 615 46 HOH HOH . 
M 5 HOH A 16 616 180 HOH HOH . 
M 5 HOH A 17 617 22 HOH HOH . 
M 5 HOH A 18 618 63 HOH HOH . 
M 5 HOH A 19 619 89 HOH HOH . 
M 5 HOH A 20 620 7 HOH HOH . 
M 5 HOH A 21 621 86 HOH HOH . 
M 5 HOH A 22 622 17 HOH HOH . 
M 5 HOH A 23 623 104 HOH HOH . 
M 5 HOH A 24 624 1 HOH HOH . 
M 5 HOH A 25 625 74 HOH HOH . 
M 5 HOH A 26 626 30 HOH HOH . 
M 5 HOH A 27 627 29 HOH HOH . 
M 5 HOH A 28 628 10 HOH HOH . 
M 5 HOH A 29 629 26 HOH HOH . 
M 5 HOH A 30 630 83 HOH HOH . 
M 5 HOH A 31 631 119 HOH HOH . 
M 5 HOH A 32 632 140 HOH HOH . 
M 5 HOH A 33 633 91 HOH HOH . 
M 5 HOH A 34 634 123 HOH HOH . 
M 5 HOH A 35 635 58 HOH HOH . 
M 5 HOH A 36 636 42 HOH HOH . 
M 5 HOH A 37 637 19 HOH HOH . 
M 5 HOH A 38 638 161 HOH HOH . 
M 5 HOH A 39 639 175 HOH HOH . 
M 5 HOH A 40 640 78 HOH HOH . 
M 5 HOH A 41 641 41 HOH HOH . 
M 5 HOH A 42 642 134 HOH HOH . 
M 5 HOH A 43 643 126 HOH HOH . 
M 5 HOH A 44 644 162 HOH HOH . 
M 5 HOH A 45 645 157 HOH HOH . 
M 5 HOH A 46 646 64 HOH HOH . 
M 5 HOH A 47 647 47 HOH HOH . 
M 5 HOH A 48 648 70 HOH HOH . 
M 5 HOH A 49 649 99 HOH HOH . 
M 5 HOH A 50 650 137 HOH HOH . 
M 5 HOH A 51 651 39 HOH HOH . 
M 5 HOH A 52 652 118 HOH HOH . 
M 5 HOH A 53 653 25 HOH HOH . 
M 5 HOH A 54 654 93 HOH HOH . 
M 5 HOH A 55 655 32 HOH HOH . 
M 5 HOH A 56 656 120 HOH HOH . 
M 5 HOH A 57 657 80 HOH HOH . 
M 5 HOH A 58 658 48 HOH HOH . 
M 5 HOH A 59 659 172 HOH HOH . 
M 5 HOH A 60 660 158 HOH HOH . 
M 5 HOH A 61 661 107 HOH HOH . 
M 5 HOH A 62 662 100 HOH HOH . 
M 5 HOH A 63 663 121 HOH HOH . 
M 5 HOH A 64 664 144 HOH HOH . 
M 5 HOH A 65 665 72 HOH HOH . 
M 5 HOH A 66 666 71 HOH HOH . 
M 5 HOH A 67 667 160 HOH HOH . 
M 5 HOH A 68 668 114 HOH HOH . 
M 5 HOH A 69 669 12 HOH HOH . 
M 5 HOH A 70 670 76 HOH HOH . 
M 5 HOH A 71 671 14 HOH HOH . 
M 5 HOH A 72 672 38 HOH HOH . 
M 5 HOH A 73 673 159 HOH HOH . 
M 5 HOH A 74 674 165 HOH HOH . 
M 5 HOH A 75 675 132 HOH HOH . 
M 5 HOH A 76 676 50 HOH HOH . 
M 5 HOH A 77 677 170 HOH HOH . 
M 5 HOH A 78 678 129 HOH HOH . 
M 5 HOH A 79 679 37 HOH HOH . 
M 5 HOH A 80 680 111 HOH HOH . 
M 5 HOH A 81 681 166 HOH HOH . 
M 5 HOH A 82 682 11 HOH HOH . 
M 5 HOH A 83 683 148 HOH HOH . 
M 5 HOH A 84 684 21 HOH HOH . 
M 5 HOH A 85 685 151 HOH HOH . 
M 5 HOH A 86 686 133 HOH HOH . 
M 5 HOH A 87 687 87 HOH HOH . 
M 5 HOH A 88 688 20 HOH HOH . 
M 5 HOH A 89 689 149 HOH HOH . 
M 5 HOH A 90 690 156 HOH HOH . 
M 5 HOH A 91 691 131 HOH HOH . 
M 5 HOH A 92 692 128 HOH HOH . 
M 5 HOH A 93 693 98 HOH HOH . 
M 5 HOH A 94 694 136 HOH HOH . 
M 5 HOH A 95 695 105 HOH HOH . 
M 5 HOH A 96 696 125 HOH HOH . 
M 5 HOH A 97 697 177 HOH HOH . 
M 5 HOH A 98 698 179 HOH HOH . 
M 5 HOH A 99 699 171 HOH HOH . 
N 5 HOH B 1 601 3 HOH HOH . 
N 5 HOH B 2 602 57 HOH HOH . 
N 5 HOH B 3 603 88 HOH HOH . 
N 5 HOH B 4 604 45 HOH HOH . 
N 5 HOH B 5 605 60 HOH HOH . 
N 5 HOH B 6 606 23 HOH HOH . 
N 5 HOH B 7 607 61 HOH HOH . 
N 5 HOH B 8 608 62 HOH HOH . 
N 5 HOH B 9 609 15 HOH HOH . 
N 5 HOH B 10 610 49 HOH HOH . 
N 5 HOH B 11 611 36 HOH HOH . 
N 5 HOH B 12 612 146 HOH HOH . 
N 5 HOH B 13 613 51 HOH HOH . 
N 5 HOH B 14 614 169 HOH HOH . 
N 5 HOH B 15 615 85 HOH HOH . 
N 5 HOH B 16 616 8 HOH HOH . 
N 5 HOH B 17 617 52 HOH HOH . 
N 5 HOH B 18 618 68 HOH HOH . 
N 5 HOH B 19 619 67 HOH HOH . 
N 5 HOH B 20 620 31 HOH HOH . 
N 5 HOH B 21 621 154 HOH HOH . 
N 5 HOH B 22 622 142 HOH HOH . 
N 5 HOH B 23 623 96 HOH HOH . 
N 5 HOH B 24 624 116 HOH HOH . 
N 5 HOH B 25 625 94 HOH HOH . 
N 5 HOH B 26 626 18 HOH HOH . 
N 5 HOH B 27 627 34 HOH HOH . 
N 5 HOH B 28 628 115 HOH HOH . 
N 5 HOH B 29 629 35 HOH HOH . 
N 5 HOH B 30 630 102 HOH HOH . 
N 5 HOH B 31 631 141 HOH HOH . 
N 5 HOH B 32 632 2 HOH HOH . 
N 5 HOH B 33 633 139 HOH HOH . 
N 5 HOH B 34 634 43 HOH HOH . 
N 5 HOH B 35 635 65 HOH HOH . 
N 5 HOH B 36 636 56 HOH HOH . 
N 5 HOH B 37 637 150 HOH HOH . 
N 5 HOH B 38 638 13 HOH HOH . 
N 5 HOH B 39 639 168 HOH HOH . 
N 5 HOH B 40 640 122 HOH HOH . 
N 5 HOH B 41 641 33 HOH HOH . 
N 5 HOH B 42 642 69 HOH HOH . 
N 5 HOH B 43 643 147 HOH HOH . 
N 5 HOH B 44 644 181 HOH HOH . 
N 5 HOH B 45 645 66 HOH HOH . 
N 5 HOH B 46 646 106 HOH HOH . 
N 5 HOH B 47 647 55 HOH HOH . 
N 5 HOH B 48 648 73 HOH HOH . 
N 5 HOH B 49 649 28 HOH HOH . 
N 5 HOH B 50 650 117 HOH HOH . 
N 5 HOH B 51 651 101 HOH HOH . 
N 5 HOH B 52 652 6 HOH HOH . 
N 5 HOH B 53 653 54 HOH HOH . 
N 5 HOH B 54 654 112 HOH HOH . 
N 5 HOH B 55 655 82 HOH HOH . 
N 5 HOH B 56 656 95 HOH HOH . 
N 5 HOH B 57 657 53 HOH HOH . 
N 5 HOH B 58 658 127 HOH HOH . 
N 5 HOH B 59 659 77 HOH HOH . 
N 5 HOH B 60 660 163 HOH HOH . 
N 5 HOH B 61 661 109 HOH HOH . 
N 5 HOH B 62 662 92 HOH HOH . 
N 5 HOH B 63 663 143 HOH HOH . 
N 5 HOH B 64 664 90 HOH HOH . 
N 5 HOH B 65 665 176 HOH HOH . 
N 5 HOH B 66 666 164 HOH HOH . 
N 5 HOH B 67 667 145 HOH HOH . 
N 5 HOH B 68 668 174 HOH HOH . 
N 5 HOH B 69 669 152 HOH HOH . 
N 5 HOH B 70 670 173 HOH HOH . 
N 5 HOH B 71 671 178 HOH HOH . 
N 5 HOH B 72 672 130 HOH HOH . 
N 5 HOH B 73 673 81 HOH HOH . 
N 5 HOH B 74 674 135 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 2 -38.123 40.507 11.257 1 63.98 ? C1 EDO 502 B 1 
HETATM 2 O O1 EDO . . . I 2 -39.328 41.17 11.63 1 66.66 ? O1 EDO 502 B 1 
HETATM 3 C C2 EDO . . . I 2 -38.254 39.735 9.902 1 60.1 ? C2 EDO 502 B 1 
HETATM 4 O O2 EDO . . . I 2 -39.344 38.817 9.846 1 55.46 ? O2 EDO 502 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#