data_6HE6 # _model_server_result.job_id vcofnNkuKPZi_oTWsNG1uA _model_server_result.datetime_utc '2025-01-10 08:35:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6he6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6HE6 # _exptl.entry_id 6HE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.437 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECANE-TRIMETHYLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HE6 _cell.length_a 75.87 _cell.length_b 75.87 _cell.length_c 97.928 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H34 N 1' _chem_comp.formula_weight 228.437 _chem_comp.id CAT _chem_comp.mon_nstd_flag . _chem_comp.name DODECANE-TRIMETHYLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CAT sing 70 n n C1 NE1 CAT sing 71 n n C1 H11 CAT sing 72 n n C1 H12 CAT sing 73 n n C2 C3 CAT sing 74 n n C2 H21 CAT sing 75 n n C2 H22 CAT sing 76 n n C3 C4 CAT sing 77 n n C3 H31 CAT sing 78 n n C3 H32 CAT sing 79 n n C4 C5 CAT sing 80 n n C4 H41 CAT sing 81 n n C4 H42 CAT sing 82 n n C5 C6 CAT sing 83 n n C5 H51 CAT sing 84 n n C5 H52 CAT sing 85 n n C6 C7 CAT sing 86 n n C6 H61 CAT sing 87 n n C6 H62 CAT sing 88 n n C7 C8 CAT sing 89 n n C7 H71 CAT sing 90 n n C7 H72 CAT sing 91 n n C8 C9 CAT sing 92 n n C8 H81 CAT sing 93 n n C8 H82 CAT sing 94 n n C9 C10 CAT sing 95 n n C9 H91 CAT sing 96 n n C9 H92 CAT sing 97 n n C10 C11 CAT sing 98 n n C10 H101 CAT sing 99 n n C10 H102 CAT sing 100 n n C11 C12 CAT sing 101 n n C11 H111 CAT sing 102 n n C11 H112 CAT sing 103 n n C12 H121 CAT sing 104 n n C12 H122 CAT sing 105 n n C12 H123 CAT sing 106 n n CA1 NE1 CAT sing 107 n n CA1 HA11 CAT sing 108 n n CA1 HA12 CAT sing 109 n n CA1 HA13 CAT sing 110 n n CB1 NE1 CAT sing 111 n n CB1 HB11 CAT sing 112 n n CB1 HB12 CAT sing 113 n n CB1 HB13 CAT sing 114 n n CC1 NE1 CAT sing 115 n n CC1 HC11 CAT sing 116 n n CC1 HC12 CAT sing 117 n n CC1 HC13 CAT sing 118 n n # _atom_sites.entry_id 6HE6 _atom_sites.fract_transf_matrix[1][1] 0.01318 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01318 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CAT A 1 201 248 CAT CAT . D 3 HOH A 1 301 2 HOH HOH . D 3 HOH A 2 302 21 HOH HOH . D 3 HOH A 3 303 24 HOH HOH . D 3 HOH A 4 304 11 HOH HOH . D 3 HOH A 5 305 17 HOH HOH . D 3 HOH A 6 306 16 HOH HOH . D 3 HOH A 7 307 20 HOH HOH . D 3 HOH A 8 308 15 HOH HOH . D 3 HOH A 9 309 12 HOH HOH . D 3 HOH A 10 310 14 HOH HOH . D 3 HOH A 11 311 19 HOH HOH . D 3 HOH A 12 312 10 HOH HOH . E 3 HOH B 1 201 25 HOH HOH . E 3 HOH B 2 202 3 HOH HOH . E 3 HOH B 3 203 7 HOH HOH . E 3 HOH B 4 204 8 HOH HOH . E 3 HOH B 5 205 1 HOH HOH . E 3 HOH B 6 206 4 HOH HOH . E 3 HOH B 7 207 18 HOH HOH . E 3 HOH B 8 208 23 HOH HOH . E 3 HOH B 9 209 5 HOH HOH . E 3 HOH B 10 210 9 HOH HOH . E 3 HOH B 11 211 22 HOH HOH . E 3 HOH B 12 212 13 HOH HOH . E 3 HOH B 13 213 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CAT . . . C 2 26.036 -19.436 13.352 1 78.22 ? C1 CAT 201 A 1 HETATM 2 C C2 CAT . . . C 2 25.517 -19.626 14.786 1 77.48 ? C2 CAT 201 A 1 HETATM 3 C C3 CAT . . . C 2 24.178 -18.899 14.995 1 68.28 ? C3 CAT 201 A 1 HETATM 4 C C4 CAT . . . C 2 23.325 -19.526 16.112 1 73.44 ? C4 CAT 201 A 1 HETATM 5 C C5 CAT . . . C 2 22.063 -18.674 16.334 1 75.21 ? C5 CAT 201 A 1 HETATM 6 C C6 CAT . . . C 2 20.989 -19.353 17.201 1 78.45 ? C6 CAT 201 A 1 HETATM 7 C C7 CAT . . . C 2 19.681 -19.414 16.406 1 77.4 ? C7 CAT 201 A 1 HETATM 8 C C8 CAT . . . C 2 18.414 -19.437 17.268 1 81.03 ? C8 CAT 201 A 1 HETATM 9 C C9 CAT . . . C 2 17.328 -18.669 16.506 1 80.98 ? C9 CAT 201 A 1 HETATM 10 C C10 CAT . . . C 2 15.928 -18.984 17.027 1 82.46 ? C10 CAT 201 A 1 HETATM 11 C C11 CAT . . . C 2 15.105 -17.691 17.03 1 80.07 ? C11 CAT 201 A 1 HETATM 12 C C12 CAT . . . C 2 13.768 -17.907 16.321 1 74.88 ? C12 CAT 201 A 1 HETATM 13 C CA1 CAT . . . C 2 27.836 -18.672 11.949 1 71.9 ? CA1 CAT 201 A 1 HETATM 14 C CB1 CAT . . . C 2 27.526 -17.771 14.124 1 78.24 ? CB1 CAT 201 A 1 HETATM 15 C CC1 CAT . . . C 2 28.303 -20.013 13.824 1 84.41 ? CC1 CAT 201 A 1 HETATM 16 N NE1 CAT . . . C 2 27.419 -18.976 13.317 1 81.02 ? NE1 CAT 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #