data_6HF0 # _model_server_result.job_id YwaUZGzzuRd5Ekt76ETGbA _model_server_result.datetime_utc '2024-12-02 07:43:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 6HF0 # _exptl.entry_id 6HF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.311 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(2~{S},6~{R})-2,6-dimethylpiperidin-1-yl]-8-nitro-6-(trifluoromethyl)-1,3-benzoxazin-4-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.2 _cell.angle_gamma 90 _cell.entry_id 6HF0 _cell.length_a 78.64 _cell.length_b 85.41 _cell.length_c 80.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 407 A CYS 387 1_555 D N8 G1H . A G1H 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.73 ? covale ? covale2 B SG CYS 407 B CYS 387 1_555 F N8 G1H . B G1H 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.734 ? # _chem_comp.formula 'C16 H16 F3 N3 O4' _chem_comp.formula_weight 371.311 _chem_comp.id G1H _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(2~{S},6~{R})-2,6-dimethylpiperidin-1-yl]-8-nitro-6-(trifluoromethyl)-1,3-benzoxazin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F29 C7 G1H sing 174 n n F28 C7 G1H sing 175 n n O15 C14 G1H doub 176 n n C7 F27 G1H sing 177 n n C7 C6 G1H sing 178 n n C5 C6 G1H doub 179 n y C5 C4 G1H sing 180 n y C14 C4 G1H sing 181 n n C14 N13 G1H sing 182 n n C6 C1 G1H sing 183 n y C4 C3 G1H doub 184 n y N13 C12 G1H doub 185 n n C1 C2 G1H doub 186 n y C3 C2 G1H sing 187 n y C3 O11 G1H sing 188 n n C22 C21 G1H sing 189 n n C12 O11 G1H sing 190 n n C12 N16 G1H sing 191 n n C2 N8 G1H sing 192 n n C21 N16 G1H sing 193 n n C21 C20 G1H sing 194 n n N16 C17 G1H sing 195 n n N8 O9 G1H doub 196 n n C20 C19 G1H sing 197 n n C23 C17 G1H sing 198 n n C17 C18 G1H sing 199 n n C19 C18 G1H sing 200 n n C1 H1 G1H sing 201 n n C5 H2 G1H sing 202 n n C21 H5 G1H sing 203 n n C22 H6 G1H sing 204 n n C22 H7 G1H sing 205 n n C22 H8 G1H sing 206 n n C20 H9 G1H sing 207 n n C20 H10 G1H sing 208 n n C19 H11 G1H sing 209 n n C19 H12 G1H sing 210 n n C18 H13 G1H sing 211 n n C18 H14 G1H sing 212 n n C17 H15 G1H sing 213 n n C23 H16 G1H sing 214 n n C23 H17 G1H sing 215 n n C23 H18 G1H sing 216 n n N8 OXT G1H sing 217 n n # _atom_sites.entry_id 6HF0 _atom_sites.fract_transf_matrix[1][1] 0.012716 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002983 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 900 900 FAD FAD . D 3 G1H A 1 901 901 G1H IR9 . E 2 FAD B 1 900 900 FAD FAD . F 3 G1H B 1 901 901 G1H IR9 . G 4 HOH A 1 1001 32 HOH HOH . G 4 HOH A 2 1002 17 HOH HOH . G 4 HOH A 3 1003 67 HOH HOH . G 4 HOH A 4 1004 5 HOH HOH . G 4 HOH A 5 1005 55 HOH HOH . G 4 HOH A 6 1006 47 HOH HOH . G 4 HOH A 7 1007 41 HOH HOH . G 4 HOH A 8 1008 15 HOH HOH . G 4 HOH A 9 1009 68 HOH HOH . G 4 HOH A 10 1010 29 HOH HOH . G 4 HOH A 11 1011 7 HOH HOH . G 4 HOH A 12 1012 66 HOH HOH . G 4 HOH A 13 1013 11 HOH HOH . G 4 HOH A 14 1014 1 HOH HOH . G 4 HOH A 15 1015 18 HOH HOH . G 4 HOH A 16 1016 25 HOH HOH . G 4 HOH A 17 1017 36 HOH HOH . G 4 HOH A 18 1018 62 HOH HOH . G 4 HOH A 19 1019 9 HOH HOH . G 4 HOH A 20 1020 64 HOH HOH . G 4 HOH A 21 1021 23 HOH HOH . G 4 HOH A 22 1022 38 HOH HOH . G 4 HOH A 23 1023 56 HOH HOH . G 4 HOH A 24 1024 13 HOH HOH . G 4 HOH A 25 1025 33 HOH HOH . G 4 HOH A 26 1026 21 HOH HOH . G 4 HOH A 27 1027 28 HOH HOH . G 4 HOH A 28 1028 52 HOH HOH . G 4 HOH A 29 1029 42 HOH HOH . G 4 HOH A 30 1030 70 HOH HOH . G 4 HOH A 31 1031 60 HOH HOH . G 4 HOH A 32 1032 27 HOH HOH . G 4 HOH A 33 1033 19 HOH HOH . G 4 HOH A 34 1034 40 HOH HOH . G 4 HOH A 35 1035 34 HOH HOH . G 4 HOH A 36 1036 24 HOH HOH . G 4 HOH A 37 1037 53 HOH HOH . G 4 HOH A 38 1038 61 HOH HOH . G 4 HOH A 39 1039 35 HOH HOH . G 4 HOH A 40 1040 69 HOH HOH . G 4 HOH A 41 1041 63 HOH HOH . G 4 HOH A 42 1042 74 HOH HOH . H 4 HOH B 1 1001 51 HOH HOH . H 4 HOH B 2 1002 3 HOH HOH . H 4 HOH B 3 1003 72 HOH HOH . H 4 HOH B 4 1004 73 HOH HOH . H 4 HOH B 5 1005 37 HOH HOH . H 4 HOH B 6 1006 26 HOH HOH . H 4 HOH B 7 1007 39 HOH HOH . H 4 HOH B 8 1008 30 HOH HOH . H 4 HOH B 9 1009 6 HOH HOH . H 4 HOH B 10 1010 2 HOH HOH . H 4 HOH B 11 1011 10 HOH HOH . H 4 HOH B 12 1012 12 HOH HOH . H 4 HOH B 13 1013 8 HOH HOH . H 4 HOH B 14 1014 57 HOH HOH . H 4 HOH B 15 1015 58 HOH HOH . H 4 HOH B 16 1016 50 HOH HOH . H 4 HOH B 17 1017 44 HOH HOH . H 4 HOH B 18 1018 14 HOH HOH . H 4 HOH B 19 1019 49 HOH HOH . H 4 HOH B 20 1020 43 HOH HOH . H 4 HOH B 21 1021 16 HOH HOH . H 4 HOH B 22 1022 4 HOH HOH . H 4 HOH B 23 1023 22 HOH HOH . H 4 HOH B 24 1024 20 HOH HOH . H 4 HOH B 25 1025 48 HOH HOH . H 4 HOH B 26 1026 71 HOH HOH . H 4 HOH B 27 1027 65 HOH HOH . H 4 HOH B 28 1028 31 HOH HOH . H 4 HOH B 29 1029 59 HOH HOH . H 4 HOH B 30 1030 54 HOH HOH . H 4 HOH B 31 1031 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G1H . . . D 3 17.479 -15.125 36.572 1 62.83 ? C1 G1H 901 A 1 HETATM 2 C C2 G1H . . . D 3 16.655 -15.869 37.422 1 70.26 ? C2 G1H 901 A 1 HETATM 3 C C3 G1H . . . D 3 15.609 -16.601 36.876 1 65.85 ? C3 G1H 901 A 1 HETATM 4 C C5 G1H . . . D 3 16.186 -15.852 34.652 1 61.03 ? C5 G1H 901 A 1 HETATM 5 C C4 G1H . . . D 3 15.372 -16.59 35.51 1 71.33 ? C4 G1H 901 A 1 HETATM 6 C C6 G1H . . . D 3 17.239 -15.107 35.191 1 68.26 ? C6 G1H 901 A 1 HETATM 7 N N8 G1H . . . D 3 16.884 -15.912 38.819 1 79.84 ? N8 G1H 901 A 1 HETATM 8 O O9 G1H . . . D 3 15.845 -16.005 39.77 1 77.08 ? O9 G1H 901 A 1 HETATM 9 C C7 G1H . . . D 3 18.133 -14.316 34.275 1 68.15 ? C7 G1H 901 A 1 HETATM 10 F F28 G1H . . . D 3 17.424 -13.526 33.501 1 67.97 ? F28 G1H 901 A 1 HETATM 11 F F27 G1H . . . D 3 19.031 -13.641 34.974 1 69.17 ? F27 G1H 901 A 1 HETATM 12 F F29 G1H . . . D 3 18.76 -15.169 33.485 1 64.02 ? F29 G1H 901 A 1 HETATM 13 O O11 G1H . . . D 3 14.802 -17.338 37.698 1 75.3 ? O11 G1H 901 A 1 HETATM 14 C C12 G1H . . . D 3 13.739 -18.075 37.218 1 66.73 ? C12 G1H 901 A 1 HETATM 15 N N13 G1H . . . D 3 13.463 -18.117 35.887 1 71.05 ? N13 G1H 901 A 1 HETATM 16 C C14 G1H . . . D 3 14.227 -17.395 35.01 1 74.28 ? C14 G1H 901 A 1 HETATM 17 O O15 G1H . . . D 3 14 -17.396 33.779 1 66.29 ? O15 G1H 901 A 1 HETATM 18 N N16 G1H . . . D 3 13.041 -18.82 38.179 1 75.49 ? N16 G1H 901 A 1 HETATM 19 C C21 G1H . . . D 3 11.676 -19.279 37.941 1 73.7 ? C21 G1H 901 A 1 HETATM 20 C C22 G1H . . . D 3 11.706 -20.473 36.996 1 56.92 ? C22 G1H 901 A 1 HETATM 21 C C20 G1H . . . D 3 11.091 -19.69 39.292 1 82.83 ? C20 G1H 901 A 1 HETATM 22 C C19 G1H . . . D 3 11.565 -18.759 40.402 1 87.33 ? C19 G1H 901 A 1 HETATM 23 C C18 G1H . . . D 3 13.05 -18.943 40.685 1 93.51 ? C18 G1H 901 A 1 HETATM 24 C C17 G1H . . . D 3 13.843 -19.161 39.387 1 89.07 ? C17 G1H 901 A 1 HETATM 25 C C23 G1H . . . D 3 14.416 -20.586 39.338 1 85.54 ? C23 G1H 901 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #