data_6HF3
#
_model_server_result.job_id            7sWfknF-SbwkndR8APivhA 
_model_server_result.datetime_utc      '2024-11-24 02:41:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hf3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6HF3 
#
_exptl.entry_id    6HF3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.36 
_cell.angle_gamma         90 
_cell.entry_id            6HF3 
_cell.length_a            78.23 
_cell.length_b            84.11 
_cell.length_c            80.77 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HF3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 407 A CYS 387 1_555 C NBE 26J . A 26J 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.659 ? 
covale ? covale2 B SG CYS 407 B CYS 387 1_555 E NBE 26J . B 26J 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.637 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 141 n n 
PA O2A FAD sing 142 n n 
PA O5B FAD sing 143 n n 
PA O3P FAD sing 144 n n 
O2A HOA2 FAD sing 145 n n 
O5B C5B FAD sing 146 n n 
C5B C4B FAD sing 147 n n 
C5B H51A FAD sing 148 n n 
C5B H52A FAD sing 149 n n 
C4B O4B FAD sing 150 n n 
C4B C3B FAD sing 151 n n 
C4B H4B FAD sing 152 n n 
O4B C1B FAD sing 153 n n 
C3B O3B FAD sing 154 n n 
C3B C2B FAD sing 155 n n 
C3B H3B FAD sing 156 n n 
O3B HO3A FAD sing 157 n n 
C2B O2B FAD sing 158 n n 
C2B C1B FAD sing 159 n n 
C2B H2B FAD sing 160 n n 
O2B HO2A FAD sing 161 n n 
C1B N9A FAD sing 162 n n 
C1B H1B FAD sing 163 n n 
N9A C8A FAD sing 164 n y 
N9A C4A FAD sing 165 n y 
C8A N7A FAD doub 166 n y 
C8A H8A FAD sing 167 n n 
N7A C5A FAD sing 168 n y 
C5A C6A FAD sing 169 n y 
C5A C4A FAD doub 170 n y 
C6A N6A FAD sing 171 n n 
C6A N1A FAD doub 172 n y 
N6A H61A FAD sing 173 n n 
N6A H62A FAD sing 174 n n 
N1A C2A FAD sing 175 n y 
C2A N3A FAD doub 176 n y 
C2A H2A FAD sing 177 n n 
N3A C4A FAD sing 178 n y 
N1 C2 FAD sing 179 n n 
N1 C10 FAD doub 180 n n 
C2 O2 FAD doub 181 n n 
C2 N3 FAD sing 182 n n 
N3 C4 FAD sing 183 n n 
N3 HN3 FAD sing 184 n n 
C4 O4 FAD doub 185 n n 
C4 C4X FAD sing 186 n n 
C4X N5 FAD doub 187 n n 
C4X C10 FAD sing 188 n n 
N5 C5X FAD sing 189 n n 
C5X C6 FAD doub 190 n y 
C5X C9A FAD sing 191 n y 
C6 C7 FAD sing 192 n y 
C6 H6 FAD sing 193 n n 
C7 C7M FAD sing 194 n n 
C7 C8 FAD doub 195 n y 
C7M HM71 FAD sing 196 n n 
C7M HM72 FAD sing 197 n n 
C7M HM73 FAD sing 198 n n 
C8 C8M FAD sing 199 n n 
C8 C9 FAD sing 200 n y 
C8M HM81 FAD sing 201 n n 
C8M HM82 FAD sing 202 n n 
C8M HM83 FAD sing 203 n n 
C9 C9A FAD doub 204 n y 
C9 H9 FAD sing 205 n n 
C9A N10 FAD sing 206 n n 
N10 C10 FAD sing 207 n n 
N10 C1' FAD sing 208 n n 
C1' C2' FAD sing 209 n n 
C1' "H1'1" FAD sing 210 n n 
C1' "H1'2" FAD sing 211 n n 
C2' O2' FAD sing 212 n n 
C2' C3' FAD sing 213 n n 
C2' H2' FAD sing 214 n n 
O2' HO2' FAD sing 215 n n 
C3' O3' FAD sing 216 n n 
C3' C4' FAD sing 217 n n 
C3' H3' FAD sing 218 n n 
O3' HO3' FAD sing 219 n n 
C4' O4' FAD sing 220 n n 
C4' C5' FAD sing 221 n n 
C4' H4' FAD sing 222 n n 
O4' HO4' FAD sing 223 n n 
C5' O5' FAD sing 224 n n 
C5' "H5'1" FAD sing 225 n n 
C5' "H5'2" FAD sing 226 n n 
O5' P FAD sing 227 n n 
P O1P FAD doub 228 n n 
P O2P FAD sing 229 n n 
P O3P FAD sing 230 n n 
O2P HOP2 FAD sing 231 n n 
#
_atom_sites.entry_id                     6HF3 
_atom_sites.fract_transf_matrix[1][1]    0.012783 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003036 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011889 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012725 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 26J A 1 501 800 26J I81 . 
D 3 FAD A 1 502 900 FAD FAD . 
E 2 26J B 1 501 800 26J I81 . 
F 3 FAD B 1 502 900 FAD FAD . 
G 4 HOH A 1 601 4 HOH HOH . 
G 4 HOH A 2 602 34 HOH HOH . 
G 4 HOH A 3 603 23 HOH HOH . 
G 4 HOH A 4 604 48 HOH HOH . 
G 4 HOH A 5 605 32 HOH HOH . 
G 4 HOH A 6 606 8 HOH HOH . 
G 4 HOH A 7 607 1 HOH HOH . 
G 4 HOH A 8 608 58 HOH HOH . 
G 4 HOH A 9 609 18 HOH HOH . 
G 4 HOH A 10 610 14 HOH HOH . 
G 4 HOH A 11 611 13 HOH HOH . 
G 4 HOH A 12 612 22 HOH HOH . 
G 4 HOH A 13 613 30 HOH HOH . 
G 4 HOH A 14 614 53 HOH HOH . 
G 4 HOH A 15 615 12 HOH HOH . 
G 4 HOH A 16 616 51 HOH HOH . 
G 4 HOH A 17 617 43 HOH HOH . 
G 4 HOH A 18 618 16 HOH HOH . 
G 4 HOH A 19 619 40 HOH HOH . 
G 4 HOH A 20 620 6 HOH HOH . 
G 4 HOH A 21 621 28 HOH HOH . 
G 4 HOH A 22 622 59 HOH HOH . 
G 4 HOH A 23 623 10 HOH HOH . 
G 4 HOH A 24 624 35 HOH HOH . 
G 4 HOH A 25 625 52 HOH HOH . 
G 4 HOH A 26 626 7 HOH HOH . 
G 4 HOH A 27 627 29 HOH HOH . 
G 4 HOH A 28 628 57 HOH HOH . 
G 4 HOH A 29 629 24 HOH HOH . 
G 4 HOH A 30 630 46 HOH HOH . 
G 4 HOH A 31 631 37 HOH HOH . 
G 4 HOH A 32 632 42 HOH HOH . 
G 4 HOH A 33 633 31 HOH HOH . 
H 4 HOH B 1 601 20 HOH HOH . 
H 4 HOH B 2 602 2 HOH HOH . 
H 4 HOH B 3 603 17 HOH HOH . 
H 4 HOH B 4 604 15 HOH HOH . 
H 4 HOH B 5 605 49 HOH HOH . 
H 4 HOH B 6 606 27 HOH HOH . 
H 4 HOH B 7 607 39 HOH HOH . 
H 4 HOH B 8 608 60 HOH HOH . 
H 4 HOH B 9 609 21 HOH HOH . 
H 4 HOH B 10 610 9 HOH HOH . 
H 4 HOH B 11 611 19 HOH HOH . 
H 4 HOH B 12 612 44 HOH HOH . 
H 4 HOH B 13 613 5 HOH HOH . 
H 4 HOH B 14 614 45 HOH HOH . 
H 4 HOH B 15 615 3 HOH HOH . 
H 4 HOH B 16 616 25 HOH HOH . 
H 4 HOH B 17 617 54 HOH HOH . 
H 4 HOH B 18 618 56 HOH HOH . 
H 4 HOH B 19 619 11 HOH HOH . 
H 4 HOH B 20 620 47 HOH HOH . 
H 4 HOH B 21 621 26 HOH HOH . 
H 4 HOH B 22 622 61 HOH HOH . 
H 4 HOH B 23 623 36 HOH HOH . 
H 4 HOH B 24 624 41 HOH HOH . 
H 4 HOH B 25 625 33 HOH HOH . 
H 4 HOH B 26 626 38 HOH HOH . 
H 4 HOH B 27 627 55 HOH HOH . 
H 4 HOH B 28 628 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 3 3.375 -8.03 41.335 1 38.99 ? PA FAD 502 A 1 
HETATM 2 O O1A FAD . . . D 3 4.244 -9.146 41.897 1 38.99 ? O1A FAD 502 A 1 
HETATM 3 O O2A FAD . . . D 3 1.91 -7.941 41.734 1 38.99 ? O2A FAD 502 A 1 
HETATM 4 O O5B FAD . . . D 3 4.087 -6.597 41.532 1 38.99 ? O5B FAD 502 A 1 
HETATM 5 C C5B FAD . . . D 3 5.508 -6.441 41.434 1 38.99 ? C5B FAD 502 A 1 
HETATM 6 C C4B FAD . . . D 3 5.83 -4.954 41.362 1 38.99 ? C4B FAD 502 A 1 
HETATM 7 O O4B FAD . . . D 3 5.28 -4.406 40.141 1 38.99 ? O4B FAD 502 A 1 
HETATM 8 C C3B FAD . . . D 3 5.166 -4.209 42.509 1 38.99 ? C3B FAD 502 A 1 
HETATM 9 O O3B FAD . . . D 3 6.042 -3.191 42.98 1 38.99 ? O3B FAD 502 A 1 
HETATM 10 C C2B FAD . . . D 3 4 -3.505 41.87 1 38.99 ? C2B FAD 502 A 1 
HETATM 11 O O2B FAD . . . D 3 3.739 -2.258 42.526 1 38.99 ? O2B FAD 502 A 1 
HETATM 12 C C1B FAD . . . D 3 4.501 -3.264 40.458 1 38.99 ? C1B FAD 502 A 1 
HETATM 13 N N9A FAD . . . D 3 3.352 -3.123 39.545 1 38.99 ? N9A FAD 502 A 1 
HETATM 14 C C8A FAD . . . D 3 2.491 -4.088 39.194 1 38.99 ? C8A FAD 502 A 1 
HETATM 15 N N7A FAD . . . D 3 1.577 -3.562 38.351 1 38.99 ? N7A FAD 502 A 1 
HETATM 16 C C5A FAD . . . D 3 1.884 -2.252 38.171 1 38.99 ? C5A FAD 502 A 1 
HETATM 17 C C6A FAD . . . D 3 1.314 -1.222 37.428 1 38.99 ? C6A FAD 502 A 1 
HETATM 18 N N6A FAD . . . D 3 0.203 -1.463 36.658 1 38.99 ? N6A FAD 502 A 1 
HETATM 19 N N1A FAD . . . D 3 1.883 0.013 37.466 1 38.99 ? N1A FAD 502 A 1 
HETATM 20 C C2A FAD . . . D 3 2.976 0.249 38.209 1 38.99 ? C2A FAD 502 A 1 
HETATM 21 N N3A FAD . . . D 3 3.546 -0.728 38.931 1 38.99 ? N3A FAD 502 A 1 
HETATM 22 C C4A FAD . . . D 3 3.014 -1.984 38.924 1 38.99 ? C4A FAD 502 A 1 
HETATM 23 N N1 FAD . . . D 3 11.499 -12.533 37.463 1 38.99 ? N1 FAD 502 A 1 
HETATM 24 C C2 FAD . . . D 3 12.484 -12.374 36.568 1 38.99 ? C2 FAD 502 A 1 
HETATM 25 O O2 FAD . . . D 3 12.952 -11.129 36.329 1 38.99 ? O2 FAD 502 A 1 
HETATM 26 N N3 FAD . . . D 3 13.003 -13.418 35.905 1 38.99 ? N3 FAD 502 A 1 
HETATM 27 C C4 FAD . . . D 3 12.527 -14.656 36.119 1 38.99 ? C4 FAD 502 A 1 
HETATM 28 O O4 FAD . . . D 3 13.024 -15.719 35.451 1 38.99 ? O4 FAD 502 A 1 
HETATM 29 C C4X FAD . . . D 3 11.459 -14.872 37.114 1 38.99 ? C4X FAD 502 A 1 
HETATM 30 N N5 FAD . . . D 3 10.958 -16.12 37.334 1 38.99 ? N5 FAD 502 A 1 
HETATM 31 C C5X FAD . . . D 3 9.951 -16.284 38.231 1 38.99 ? C5X FAD 502 A 1 
HETATM 32 C C6 FAD . . . D 3 9.421 -17.548 38.493 1 38.99 ? C6 FAD 502 A 1 
HETATM 33 C C7 FAD . . . D 3 8.399 -17.686 39.423 1 38.99 ? C7 FAD 502 A 1 
HETATM 34 C C7M FAD . . . D 3 7.826 -19.043 39.729 1 38.99 ? C7M FAD 502 A 1 
HETATM 35 C C8 FAD . . . D 3 7.862 -16.491 40.121 1 38.99 ? C8 FAD 502 A 1 
HETATM 36 C C8M FAD . . . D 3 6.763 -16.63 41.135 1 38.99 ? C8M FAD 502 A 1 
HETATM 37 C C9 FAD . . . D 3 8.383 -15.236 39.857 1 38.99 ? C9 FAD 502 A 1 
HETATM 38 C C9A FAD . . . D 3 9.42 -15.098 38.954 1 38.99 ? C9A FAD 502 A 1 
HETATM 39 N N10 FAD . . . D 3 9.969 -13.84 38.701 1 38.99 ? N10 FAD 502 A 1 
HETATM 40 C C10 FAD . . . D 3 10.989 -13.745 37.761 1 38.99 ? C10 FAD 502 A 1 
HETATM 41 C C1' FAD . . . D 3 9.465 -12.623 39.347 1 38.99 ? C1' FAD 502 A 1 
HETATM 42 C C2' FAD . . . D 3 8.361 -11.982 38.478 1 38.99 ? C2' FAD 502 A 1 
HETATM 43 O O2' FAD . . . D 3 8.744 -12.017 37.111 1 38.99 ? O2' FAD 502 A 1 
HETATM 44 C C3' FAD . . . D 3 8.25 -10.529 38.883 1 38.99 ? C3' FAD 502 A 1 
HETATM 45 O O3' FAD . . . D 3 8.188 -10.512 40.304 1 38.99 ? O3' FAD 502 A 1 
HETATM 46 C C4' FAD . . . D 3 7.064 -9.778 38.257 1 38.99 ? C4' FAD 502 A 1 
HETATM 47 O O4' FAD . . . D 3 7.182 -8.383 38.597 1 38.99 ? O4' FAD 502 A 1 
HETATM 48 C C5' FAD . . . D 3 5.732 -10.292 38.791 1 38.99 ? C5' FAD 502 A 1 
HETATM 49 O O5' FAD . . . D 3 4.667 -9.606 38.122 1 38.99 ? O5' FAD 502 A 1 
HETATM 50 P P FAD . . . D 3 3.247 -9.364 38.822 1 38.99 ? P FAD 502 A 1 
HETATM 51 O O1P FAD . . . D 3 2.284 -8.921 37.713 1 38.99 ? O1P FAD 502 A 1 
HETATM 52 O O2P FAD . . . D 3 2.918 -10.592 39.617 1 38.99 ? O2P FAD 502 A 1 
HETATM 53 O O3P FAD . . . D 3 3.428 -8.065 39.721 1 38.99 ? O3P FAD 502 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           53 
#