data_6HG1 # _model_server_result.job_id VGDmw_ds2n-5lH8nj2grlQ _model_server_result.datetime_utc '2024-11-08 15:10:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hg1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1903}' # _entry.id 6HG1 # _exptl.entry_id 6HG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HG1 _cell.length_a 81.049 _cell.length_b 160.591 _cell.length_c 58.984 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 240 A CYS 1698 1_555 A SG CYS 240 A CYS 1698 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A C LEU 97 A LEU 1555 1_555 A N KCX 98 A KCX 1556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C KCX 98 A KCX 1556 1_555 A N LEU 99 A LEU 1557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A NE2 HIS 13 A HIS 1471 1_555 C ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.707 ? metalc ? metalc2 A NE2 HIS 15 A HIS 1473 1_555 C ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc3 A OQ1 KCX 98 A KCX 1556 1_555 B ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc4 A OQ2 KCX 98 A KCX 1556 1_555 C ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc5 A ND1 HIS 134 A HIS 1592 1_555 B ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc6 A NE2 HIS 158 A HIS 1616 1_555 B ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc7 A OD1 ASP 230 A ASP 1688 1_555 C ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc8 B ZN ZN . A ZN 1901 1_555 H O HOH . A HOH 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc9 C ZN ZN . A ZN 1902 1_555 H O HOH . A HOH 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 6HG1 _atom_sites.fract_transf_matrix[1][1] 0.012338 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006227 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1901 1 ZN ZN . C 2 ZN A 1 1902 2 ZN ZN . D 3 FMT A 1 1903 1 FMT FMT . E 3 FMT A 1 1904 2 FMT FMT . F 3 FMT A 1 1905 3 FMT FMT . G 3 FMT A 1 1906 4 FMT FMT . H 4 HOH A 1 2001 49 HOH HOH . H 4 HOH A 2 2002 34 HOH HOH . H 4 HOH A 3 2003 24 HOH HOH . H 4 HOH A 4 2004 30 HOH HOH . H 4 HOH A 5 2005 18 HOH HOH . H 4 HOH A 6 2006 13 HOH HOH . H 4 HOH A 7 2007 55 HOH HOH . H 4 HOH A 8 2008 57 HOH HOH . H 4 HOH A 9 2009 38 HOH HOH . H 4 HOH A 10 2010 48 HOH HOH . H 4 HOH A 11 2011 5 HOH HOH . H 4 HOH A 12 2012 50 HOH HOH . H 4 HOH A 13 2013 33 HOH HOH . H 4 HOH A 14 2014 26 HOH HOH . H 4 HOH A 15 2015 20 HOH HOH . H 4 HOH A 16 2016 51 HOH HOH . H 4 HOH A 17 2017 43 HOH HOH . H 4 HOH A 18 2018 16 HOH HOH . H 4 HOH A 19 2019 1 HOH HOH . H 4 HOH A 20 2020 14 HOH HOH . H 4 HOH A 21 2021 47 HOH HOH . H 4 HOH A 22 2022 39 HOH HOH . H 4 HOH A 23 2023 54 HOH HOH . H 4 HOH A 24 2024 28 HOH HOH . H 4 HOH A 25 2025 25 HOH HOH . H 4 HOH A 26 2026 22 HOH HOH . H 4 HOH A 27 2027 7 HOH HOH . H 4 HOH A 28 2028 6 HOH HOH . H 4 HOH A 29 2029 11 HOH HOH . H 4 HOH A 30 2030 21 HOH HOH . H 4 HOH A 31 2031 32 HOH HOH . H 4 HOH A 32 2032 36 HOH HOH . H 4 HOH A 33 2033 23 HOH HOH . H 4 HOH A 34 2034 8 HOH HOH . H 4 HOH A 35 2035 56 HOH HOH . H 4 HOH A 36 2036 53 HOH HOH . H 4 HOH A 37 2037 2 HOH HOH . H 4 HOH A 38 2038 10 HOH HOH . H 4 HOH A 39 2039 17 HOH HOH . H 4 HOH A 40 2040 9 HOH HOH . H 4 HOH A 41 2041 12 HOH HOH . H 4 HOH A 42 2042 15 HOH HOH . H 4 HOH A 43 2043 19 HOH HOH . H 4 HOH A 44 2044 52 HOH HOH . H 4 HOH A 45 2045 37 HOH HOH . H 4 HOH A 46 2046 44 HOH HOH . H 4 HOH A 47 2047 3 HOH HOH . H 4 HOH A 48 2048 29 HOH HOH . H 4 HOH A 49 2049 46 HOH HOH . H 4 HOH A 50 2050 4 HOH HOH . H 4 HOH A 51 2051 42 HOH HOH . H 4 HOH A 52 2052 45 HOH HOH . H 4 HOH A 53 2053 40 HOH HOH . H 4 HOH A 54 2054 35 HOH HOH . H 4 HOH A 55 2055 31 HOH HOH . H 4 HOH A 56 2056 27 HOH HOH . H 4 HOH A 57 2057 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 3 -0.167 -35.463 -14.771 0.87 95.64 ? C FMT 1903 A 1 HETATM 2 O O1 FMT . . . D 3 -0.303 -34.751 -13.781 0.87 95.93 ? O1 FMT 1903 A 1 HETATM 3 O O2 FMT . . . D 3 -0.508 -35.125 -15.908 0.87 95.55 ? O2 FMT 1903 A 1 HETATM 4 H H FMT . . . D 3 0.221 -36.462 -14.636 0.87 114.77 ? H FMT 1903 A 1 HETATM 5 H HO2 FMT . . . D 3 -0.913 -34.246 -16.058 0.87 114.66 ? HO2 FMT 1903 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #