data_6HGK # _model_server_result.job_id oX19lOijPQ_VoxnXd3ScYQ _model_server_result.datetime_utc '2024-11-28 14:45:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hgk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6HGK # _exptl.entry_id 6HGK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.462 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROGESTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HGK _cell.length_a 69.426 _cell.length_b 77.701 _cell.length_c 79.151 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 O2' _chem_comp.formula_weight 314.462 _chem_comp.id STR _chem_comp.mon_nstd_flag . _chem_comp.name PROGESTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STR sing 299 n n C1 C10 STR sing 300 n n C1 H11 STR sing 301 n n C1 H12 STR sing 302 n n C2 C3 STR sing 303 n n C2 H21 STR sing 304 n n C2 H22 STR sing 305 n n C3 O3 STR doub 306 n n C3 C4 STR sing 307 n n C4 C5 STR doub 308 n n C4 H4 STR sing 309 n n C5 C6 STR sing 310 n n C5 C10 STR sing 311 n n C6 C7 STR sing 312 n n C6 H61 STR sing 313 n n C6 H62 STR sing 314 n n C7 C8 STR sing 315 n n C7 H71 STR sing 316 n n C7 H72 STR sing 317 n n C8 C9 STR sing 318 n n C8 C14 STR sing 319 n n C8 H8 STR sing 320 n n C9 C10 STR sing 321 n n C9 C11 STR sing 322 n n C9 H9 STR sing 323 n n C10 C19 STR sing 324 n n C11 C12 STR sing 325 n n C11 H111 STR sing 326 n n C11 H112 STR sing 327 n n C12 C13 STR sing 328 n n C12 H121 STR sing 329 n n C12 H122 STR sing 330 n n C13 C14 STR sing 331 n n C13 C17 STR sing 332 n n C13 C18 STR sing 333 n n C14 C15 STR sing 334 n n C14 H14 STR sing 335 n n C15 C16 STR sing 336 n n C15 H151 STR sing 337 n n C15 H152 STR sing 338 n n C16 C17 STR sing 339 n n C16 H161 STR sing 340 n n C16 H162 STR sing 341 n n C17 C20 STR sing 342 n n C17 H17 STR sing 343 n n C18 H181 STR sing 344 n n C18 H182 STR sing 345 n n C18 H183 STR sing 346 n n C19 H191 STR sing 347 n n C19 H192 STR sing 348 n n C19 H193 STR sing 349 n n C20 O20 STR doub 350 n n C20 C21 STR sing 351 n n C21 H211 STR sing 352 n n C21 H212 STR sing 353 n n C21 H213 STR sing 354 n n # _atom_sites.entry_id 6HGK _atom_sites.fract_transf_matrix[1][1] 0.014404 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01287 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012634 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 STR A 1 401 1 STR STR . D 4 EDO A 1 402 1 EDO EDO . E 4 EDO A 1 403 2 EDO EDO . F 5 HOH A 1 501 90 HOH HOH . F 5 HOH A 2 502 95 HOH HOH . F 5 HOH A 3 503 64 HOH HOH . F 5 HOH A 4 504 33 HOH HOH . F 5 HOH A 5 505 194 HOH HOH . F 5 HOH A 6 506 205 HOH HOH . F 5 HOH A 7 507 131 HOH HOH . F 5 HOH A 8 508 103 HOH HOH . F 5 HOH A 9 509 187 HOH HOH . F 5 HOH A 10 510 81 HOH HOH . F 5 HOH A 11 511 4 HOH HOH . F 5 HOH A 12 512 155 HOH HOH . F 5 HOH A 13 513 177 HOH HOH . F 5 HOH A 14 514 167 HOH HOH . F 5 HOH A 15 515 16 HOH HOH . F 5 HOH A 16 516 104 HOH HOH . F 5 HOH A 17 517 126 HOH HOH . F 5 HOH A 18 518 189 HOH HOH . F 5 HOH A 19 519 94 HOH HOH . F 5 HOH A 20 520 59 HOH HOH . F 5 HOH A 21 521 102 HOH HOH . F 5 HOH A 22 522 125 HOH HOH . F 5 HOH A 23 523 6 HOH HOH . F 5 HOH A 24 524 14 HOH HOH . F 5 HOH A 25 525 190 HOH HOH . F 5 HOH A 26 526 165 HOH HOH . F 5 HOH A 27 527 54 HOH HOH . F 5 HOH A 28 528 82 HOH HOH . F 5 HOH A 29 529 175 HOH HOH . F 5 HOH A 30 530 51 HOH HOH . F 5 HOH A 31 531 75 HOH HOH . F 5 HOH A 32 532 208 HOH HOH . F 5 HOH A 33 533 3 HOH HOH . F 5 HOH A 34 534 15 HOH HOH . F 5 HOH A 35 535 23 HOH HOH . F 5 HOH A 36 536 34 HOH HOH . F 5 HOH A 37 537 152 HOH HOH . F 5 HOH A 38 538 83 HOH HOH . F 5 HOH A 39 539 139 HOH HOH . F 5 HOH A 40 540 39 HOH HOH . F 5 HOH A 41 541 17 HOH HOH . F 5 HOH A 42 542 5 HOH HOH . F 5 HOH A 43 543 58 HOH HOH . F 5 HOH A 44 544 134 HOH HOH . F 5 HOH A 45 545 86 HOH HOH . F 5 HOH A 46 546 119 HOH HOH . F 5 HOH A 47 547 129 HOH HOH . F 5 HOH A 48 548 47 HOH HOH . F 5 HOH A 49 549 63 HOH HOH . F 5 HOH A 50 550 42 HOH HOH . F 5 HOH A 51 551 26 HOH HOH . F 5 HOH A 52 552 18 HOH HOH . F 5 HOH A 53 553 29 HOH HOH . F 5 HOH A 54 554 107 HOH HOH . F 5 HOH A 55 555 67 HOH HOH . F 5 HOH A 56 556 197 HOH HOH . F 5 HOH A 57 557 192 HOH HOH . F 5 HOH A 58 558 133 HOH HOH . F 5 HOH A 59 559 176 HOH HOH . F 5 HOH A 60 560 20 HOH HOH . F 5 HOH A 61 561 19 HOH HOH . F 5 HOH A 62 562 154 HOH HOH . F 5 HOH A 63 563 163 HOH HOH . F 5 HOH A 64 564 161 HOH HOH . F 5 HOH A 65 565 113 HOH HOH . F 5 HOH A 66 566 40 HOH HOH . F 5 HOH A 67 567 180 HOH HOH . F 5 HOH A 68 568 11 HOH HOH . F 5 HOH A 69 569 68 HOH HOH . F 5 HOH A 70 570 53 HOH HOH . F 5 HOH A 71 571 98 HOH HOH . F 5 HOH A 72 572 22 HOH HOH . F 5 HOH A 73 573 159 HOH HOH . F 5 HOH A 74 574 49 HOH HOH . F 5 HOH A 75 575 153 HOH HOH . F 5 HOH A 76 576 10 HOH HOH . F 5 HOH A 77 577 50 HOH HOH . F 5 HOH A 78 578 32 HOH HOH . F 5 HOH A 79 579 9 HOH HOH . F 5 HOH A 80 580 111 HOH HOH . F 5 HOH A 81 581 202 HOH HOH . F 5 HOH A 82 582 193 HOH HOH . F 5 HOH A 83 583 109 HOH HOH . F 5 HOH A 84 584 85 HOH HOH . F 5 HOH A 85 585 69 HOH HOH . F 5 HOH A 86 586 173 HOH HOH . F 5 HOH A 87 587 132 HOH HOH . F 5 HOH A 88 588 138 HOH HOH . F 5 HOH A 89 589 137 HOH HOH . F 5 HOH A 90 590 84 HOH HOH . F 5 HOH A 91 591 73 HOH HOH . F 5 HOH A 92 592 12 HOH HOH . F 5 HOH A 93 593 97 HOH HOH . F 5 HOH A 94 594 79 HOH HOH . F 5 HOH A 95 595 146 HOH HOH . F 5 HOH A 96 596 206 HOH HOH . F 5 HOH A 97 597 178 HOH HOH . F 5 HOH A 98 598 117 HOH HOH . F 5 HOH A 99 599 130 HOH HOH . F 5 HOH A 100 600 28 HOH HOH . F 5 HOH A 101 601 108 HOH HOH . F 5 HOH A 102 602 101 HOH HOH . F 5 HOH A 103 603 25 HOH HOH . F 5 HOH A 104 604 158 HOH HOH . F 5 HOH A 105 605 78 HOH HOH . F 5 HOH A 106 606 148 HOH HOH . F 5 HOH A 107 607 211 HOH HOH . F 5 HOH A 108 608 110 HOH HOH . F 5 HOH A 109 609 60 HOH HOH . F 5 HOH A 110 610 1 HOH HOH . F 5 HOH A 111 611 70 HOH HOH . F 5 HOH A 112 612 7 HOH HOH . F 5 HOH A 113 613 145 HOH HOH . F 5 HOH A 114 614 124 HOH HOH . F 5 HOH A 115 615 143 HOH HOH . F 5 HOH A 116 616 31 HOH HOH . F 5 HOH A 117 617 61 HOH HOH . F 5 HOH A 118 618 198 HOH HOH . F 5 HOH A 119 619 96 HOH HOH . F 5 HOH A 120 620 92 HOH HOH . F 5 HOH A 121 621 2 HOH HOH . F 5 HOH A 122 622 166 HOH HOH . F 5 HOH A 123 623 21 HOH HOH . F 5 HOH A 124 624 30 HOH HOH . F 5 HOH A 125 625 209 HOH HOH . F 5 HOH A 126 626 48 HOH HOH . F 5 HOH A 127 627 200 HOH HOH . F 5 HOH A 128 628 191 HOH HOH . F 5 HOH A 129 629 184 HOH HOH . F 5 HOH A 130 630 27 HOH HOH . F 5 HOH A 131 631 196 HOH HOH . F 5 HOH A 132 632 156 HOH HOH . F 5 HOH A 133 633 44 HOH HOH . F 5 HOH A 134 634 127 HOH HOH . F 5 HOH A 135 635 149 HOH HOH . F 5 HOH A 136 636 142 HOH HOH . F 5 HOH A 137 637 105 HOH HOH . F 5 HOH A 138 638 106 HOH HOH . F 5 HOH A 139 639 71 HOH HOH . F 5 HOH A 140 640 66 HOH HOH . F 5 HOH A 141 641 162 HOH HOH . F 5 HOH A 142 642 185 HOH HOH . F 5 HOH A 143 643 144 HOH HOH . F 5 HOH A 144 644 201 HOH HOH . F 5 HOH A 145 645 164 HOH HOH . F 5 HOH A 146 646 112 HOH HOH . F 5 HOH A 147 647 55 HOH HOH . F 5 HOH A 148 648 171 HOH HOH . F 5 HOH A 149 649 188 HOH HOH . F 5 HOH A 150 650 128 HOH HOH . F 5 HOH A 151 651 118 HOH HOH . F 5 HOH A 152 652 45 HOH HOH . F 5 HOH A 153 653 135 HOH HOH . F 5 HOH A 154 654 65 HOH HOH . F 5 HOH A 155 655 195 HOH HOH . F 5 HOH A 156 656 46 HOH HOH . F 5 HOH A 157 657 174 HOH HOH . F 5 HOH A 158 658 114 HOH HOH . F 5 HOH A 159 659 160 HOH HOH . F 5 HOH A 160 660 207 HOH HOH . F 5 HOH A 161 661 57 HOH HOH . F 5 HOH A 162 662 140 HOH HOH . F 5 HOH A 163 663 214 HOH HOH . F 5 HOH A 164 664 87 HOH HOH . F 5 HOH A 165 665 35 HOH HOH . F 5 HOH A 166 666 62 HOH HOH . F 5 HOH A 167 667 199 HOH HOH . F 5 HOH A 168 668 56 HOH HOH . F 5 HOH A 169 669 151 HOH HOH . F 5 HOH A 170 670 88 HOH HOH . F 5 HOH A 171 671 204 HOH HOH . F 5 HOH A 172 672 76 HOH HOH . F 5 HOH A 173 673 136 HOH HOH . F 5 HOH A 174 674 213 HOH HOH . F 5 HOH A 175 675 203 HOH HOH . F 5 HOH A 176 676 89 HOH HOH . F 5 HOH A 177 677 77 HOH HOH . F 5 HOH A 178 678 147 HOH HOH . F 5 HOH A 179 679 210 HOH HOH . F 5 HOH A 180 680 141 HOH HOH . F 5 HOH A 181 681 41 HOH HOH . F 5 HOH A 182 682 212 HOH HOH . F 5 HOH A 183 683 80 HOH HOH . G 5 HOH B 1 501 100 HOH HOH . G 5 HOH B 2 502 186 HOH HOH . G 5 HOH B 3 503 37 HOH HOH . G 5 HOH B 4 504 43 HOH HOH . G 5 HOH B 5 505 182 HOH HOH . G 5 HOH B 6 506 13 HOH HOH . G 5 HOH B 7 507 168 HOH HOH . G 5 HOH B 8 508 8 HOH HOH . G 5 HOH B 9 509 169 HOH HOH . G 5 HOH B 10 510 170 HOH HOH . G 5 HOH B 11 511 36 HOH HOH . G 5 HOH B 12 512 24 HOH HOH . G 5 HOH B 13 513 38 HOH HOH . G 5 HOH B 14 514 120 HOH HOH . G 5 HOH B 15 515 93 HOH HOH . G 5 HOH B 16 516 121 HOH HOH . G 5 HOH B 17 517 99 HOH HOH . G 5 HOH B 18 518 181 HOH HOH . G 5 HOH B 19 519 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STR . . . C 3 109.563 94.488 7.559 1 50.21 ? C1 STR 401 A 1 HETATM 2 C C2 STR . . . C 3 109.699 94.54 9.075 1 53.62 ? C2 STR 401 A 1 HETATM 3 C C3 STR . . . C 3 108.568 95.377 9.587 1 44.07 ? C3 STR 401 A 1 HETATM 4 O O3 STR . . . C 3 108.738 96.25 10.393 1 56.31 ? O3 STR 401 A 1 HETATM 5 C C4 STR . . . C 3 107.24 95.067 9.054 1 48.59 ? C4 STR 401 A 1 HETATM 6 C C5 STR . . . C 3 107.094 94.323 7.962 1 49.62 ? C5 STR 401 A 1 HETATM 7 C C6 STR . . . C 3 105.714 94.013 7.502 1 47.46 ? C6 STR 401 A 1 HETATM 8 C C7 STR . . . C 3 105.495 94.376 6.074 1 45.88 ? C7 STR 401 A 1 HETATM 9 C C8 STR . . . C 3 106.568 93.795 5.213 1 46.2 ? C8 STR 401 A 1 HETATM 10 C C9 STR . . . C 3 107.944 94.303 5.669 1 45.88 ? C9 STR 401 A 1 HETATM 11 C C10 STR . . . C 3 108.226 93.885 7.127 1 47.4 ? C10 STR 401 A 1 HETATM 12 C C11 STR . . . C 3 109.046 93.771 4.757 1 44.72 ? C11 STR 401 A 1 HETATM 13 C C12 STR . . . C 3 108.811 94.194 3.323 1 45.44 ? C12 STR 401 A 1 HETATM 14 C C13 STR . . . C 3 107.415 93.743 2.871 1 47.45 ? C13 STR 401 A 1 HETATM 15 C C14 STR . . . C 3 106.376 94.34 3.825 1 42.87 ? C14 STR 401 A 1 HETATM 16 C C15 STR . . . C 3 105.06 93.997 3.136 1 46.93 ? C15 STR 401 A 1 HETATM 17 C C16 STR . . . C 3 105.38 94.227 1.652 1 47.7 ? C16 STR 401 A 1 HETATM 18 C C17 STR . . . C 3 106.91 94.352 1.549 1 49.6 ? C17 STR 401 A 1 HETATM 19 C C18 STR . . . C 3 107.298 92.215 2.856 1 42.02 ? C18 STR 401 A 1 HETATM 20 C C19 STR . . . C 3 108.357 92.353 7.253 1 44.44 ? C19 STR 401 A 1 HETATM 21 C C20 STR . . . C 3 107.384 93.566 0.34 1 52.72 ? C20 STR 401 A 1 HETATM 22 O O20 STR . . . C 3 106.691 92.797 -0.25 1 60.19 ? O20 STR 401 A 1 HETATM 23 C C21 STR . . . C 3 108.793 93.823 -0.115 1 56.67 ? C21 STR 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #