data_6HHG # _model_server_result.job_id S520xgWqWOGBPfZD3WaXDQ _model_server_result.datetime_utc '2025-07-31 02:18:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6HHG # _exptl.entry_id 6HHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 635.154 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[2-chloranyl-5-[[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]carbamoylamino]phenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HHG _cell.length_a 70.82 _cell.length_b 71.23 _cell.length_c 91.24 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 60 A CYS 60 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? covale ? covale1 A SG CYS 310 A CYS 310 1_555 B CAA G4T . A G4T 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? # _chem_comp.formula 'C36 H35 Cl N6 O3' _chem_comp.formula_weight 635.154 _chem_comp.id G4T _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[2-chloranyl-5-[[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]carbamoylamino]phenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL CBI G4T sing 83 n n CAF CAA G4T sing 84 n n CAF CBF G4T sing 85 n n NBC CBM G4T sing 86 n n NBC CBF G4T sing 87 n n CBI CBM G4T doub 88 n y CBI CAO G4T sing 89 n y CBM CAT G4T sing 90 n y CBF OAB G4T doub 91 n n CAO CAP G4T doub 92 n y CAT CBJ G4T doub 93 n y CAP CBJ G4T sing 94 n y CBJ NBB G4T sing 95 n n NBB CBG G4T sing 96 n n CBG OAC G4T doub 97 n n CBG NBD G4T sing 98 n n NBD CBS G4T sing 99 n n CAV CBS G4T sing 100 n n CAV CAX G4T sing 101 n n CBS CAW G4T sing 102 n n CAX NBT G4T sing 103 n n CAW CAY G4T sing 104 n n NBT CAY G4T sing 105 n n NBT CAZ G4T sing 106 n n CAZ CBH G4T sing 107 n n CAM CBH G4T doub 108 n y CAM CAQ G4T sing 109 n y CBH CAN G4T sing 110 n y CAQ CBL G4T doub 111 n y CAN CAR G4T doub 112 n y CBL CAR G4T sing 113 n y CBL CBO G4T sing 114 n n CAK CAH G4T doub 115 n y CAK CBK G4T sing 116 n y CAH CAG G4T sing 117 n y CBO NBA G4T doub 118 n y CBO CBN G4T sing 119 n y NBA CBQ G4T sing 120 n y CBN CBK G4T sing 121 n n CBN CAU G4T doub 122 n y CBK CAL G4T doub 123 n y CBQ CAS G4T sing 124 n n CBQ CBR G4T doub 125 n y CAS CAJ G4T doub 126 n n CAG CAI G4T doub 127 n y CAU CBR G4T sing 128 n y CBR CBP G4T sing 129 n n CAJ NBE G4T sing 130 n n CAL CAI G4T sing 131 n y NBE CBP G4T sing 132 n n CBP OAD G4T doub 133 n n CAK H1 G4T sing 134 n n CAH H2 G4T sing 135 n n CAG H3 G4T sing 136 n n CAI H4 G4T sing 137 n n CAL H5 G4T sing 138 n n CAU H6 G4T sing 139 n n CAJ H7 G4T sing 140 n n CAS H8 G4T sing 141 n n CAR H10 G4T sing 142 n n CAN H11 G4T sing 143 n n CAQ H12 G4T sing 144 n n CAM H13 G4T sing 145 n n CAZ H14 G4T sing 146 n n CAZ H15 G4T sing 147 n n CAY H17 G4T sing 148 n n CAY H18 G4T sing 149 n n CAW H19 G4T sing 150 n n CAW H20 G4T sing 151 n n CAX H21 G4T sing 152 n n CAX H22 G4T sing 153 n n CAV H23 G4T sing 154 n n CAV H24 G4T sing 155 n n CBS H25 G4T sing 156 n n NBD H26 G4T sing 157 n n NBB H27 G4T sing 158 n n CAT H28 G4T sing 159 n n CAP H29 G4T sing 160 n n CAO H30 G4T sing 161 n n NBC H31 G4T sing 162 n n CAF H32 G4T sing 163 n n CAF H33 G4T sing 164 n n CAA H34 G4T sing 165 n n CAA H35 G4T sing 166 n n CAA H36 G4T sing 167 n n NBE H37 G4T sing 168 n n # _atom_sites.entry_id 6HHG _atom_sites.fract_transf_matrix[1][1] 0.01412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G4T A 1 501 1 G4T DRG . C 3 HOH A 1 601 33 HOH HOH . C 3 HOH A 2 602 259 HOH HOH . C 3 HOH A 3 603 101 HOH HOH . C 3 HOH A 4 604 111 HOH HOH . C 3 HOH A 5 605 122 HOH HOH . C 3 HOH A 6 606 163 HOH HOH . C 3 HOH A 7 607 142 HOH HOH . C 3 HOH A 8 608 165 HOH HOH . C 3 HOH A 9 609 251 HOH HOH . C 3 HOH A 10 610 167 HOH HOH . C 3 HOH A 11 611 113 HOH HOH . C 3 HOH A 12 612 100 HOH HOH . C 3 HOH A 13 613 26 HOH HOH . C 3 HOH A 14 614 97 HOH HOH . C 3 HOH A 15 615 14 HOH HOH . C 3 HOH A 16 616 169 HOH HOH . C 3 HOH A 17 617 51 HOH HOH . C 3 HOH A 18 618 15 HOH HOH . C 3 HOH A 19 619 36 HOH HOH . C 3 HOH A 20 620 96 HOH HOH . C 3 HOH A 21 621 237 HOH HOH . C 3 HOH A 22 622 180 HOH HOH . C 3 HOH A 23 623 22 HOH HOH . C 3 HOH A 24 624 138 HOH HOH . C 3 HOH A 25 625 11 HOH HOH . C 3 HOH A 26 626 116 HOH HOH . C 3 HOH A 27 627 48 HOH HOH . C 3 HOH A 28 628 171 HOH HOH . C 3 HOH A 29 629 9 HOH HOH . C 3 HOH A 30 630 1 HOH HOH . C 3 HOH A 31 631 191 HOH HOH . C 3 HOH A 32 632 155 HOH HOH . C 3 HOH A 33 633 46 HOH HOH . C 3 HOH A 34 634 55 HOH HOH . C 3 HOH A 35 635 32 HOH HOH . C 3 HOH A 36 636 137 HOH HOH . C 3 HOH A 37 637 123 HOH HOH . C 3 HOH A 38 638 3 HOH HOH . C 3 HOH A 39 639 67 HOH HOH . C 3 HOH A 40 640 23 HOH HOH . C 3 HOH A 41 641 131 HOH HOH . C 3 HOH A 42 642 186 HOH HOH . C 3 HOH A 43 643 108 HOH HOH . C 3 HOH A 44 644 160 HOH HOH . C 3 HOH A 45 645 168 HOH HOH . C 3 HOH A 46 646 164 HOH HOH . C 3 HOH A 47 647 82 HOH HOH . C 3 HOH A 48 648 166 HOH HOH . C 3 HOH A 49 649 30 HOH HOH . C 3 HOH A 50 650 45 HOH HOH . C 3 HOH A 51 651 76 HOH HOH . C 3 HOH A 52 652 136 HOH HOH . C 3 HOH A 53 653 10 HOH HOH . C 3 HOH A 54 654 42 HOH HOH . C 3 HOH A 55 655 89 HOH HOH . C 3 HOH A 56 656 265 HOH HOH . C 3 HOH A 57 657 126 HOH HOH . C 3 HOH A 58 658 236 HOH HOH . C 3 HOH A 59 659 175 HOH HOH . C 3 HOH A 60 660 177 HOH HOH . C 3 HOH A 61 661 233 HOH HOH . C 3 HOH A 62 662 68 HOH HOH . C 3 HOH A 63 663 129 HOH HOH . C 3 HOH A 64 664 94 HOH HOH . C 3 HOH A 65 665 4 HOH HOH . C 3 HOH A 66 666 181 HOH HOH . C 3 HOH A 67 667 132 HOH HOH . C 3 HOH A 68 668 187 HOH HOH . C 3 HOH A 69 669 161 HOH HOH . C 3 HOH A 70 670 159 HOH HOH . C 3 HOH A 71 671 269 HOH HOH . C 3 HOH A 72 672 134 HOH HOH . C 3 HOH A 73 673 8 HOH HOH . C 3 HOH A 74 674 133 HOH HOH . C 3 HOH A 75 675 248 HOH HOH . C 3 HOH A 76 676 69 HOH HOH . C 3 HOH A 77 677 249 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAK G4T . . . B 2 16.704 -11.581 -8.956 1 29.82 ? CAK G4T 501 A 1 HETATM 2 C CAH G4T . . . B 2 16.328 -10.245 -8.896 1 29.07 ? CAH G4T 501 A 1 HETATM 3 C CAG G4T . . . B 2 15.805 -9.722 -7.718 1 32.25 ? CAG G4T 501 A 1 HETATM 4 C CAI G4T . . . B 2 15.657 -10.542 -6.605 1 34.31 ? CAI G4T 501 A 1 HETATM 5 C CAL G4T . . . B 2 16.032 -11.879 -6.668 1 31.44 ? CAL G4T 501 A 1 HETATM 6 C CBK G4T . . . B 2 16.542 -12.408 -7.845 1 34.76 ? CBK G4T 501 A 1 HETATM 7 C CBN G4T . . . B 2 16.92 -13.753 -7.876 1 41.76 ? CBN G4T 501 A 1 HETATM 8 C CAU G4T . . . B 2 17.784 -14.181 -6.874 1 36.18 ? CAU G4T 501 A 1 HETATM 9 C CBR G4T . . . B 2 18.209 -15.501 -6.845 1 41.18 ? CBR G4T 501 A 1 HETATM 10 C CBP G4T . . . B 2 19.073 -15.958 -5.855 1 44.31 ? CBP G4T 501 A 1 HETATM 11 O OAD G4T . . . B 2 19.485 -15.201 -4.978 1 43.43 ? OAD G4T 501 A 1 HETATM 12 N NBE G4T . . . B 2 19.48 -17.299 -5.857 1 43.63 ? NBE G4T 501 A 1 HETATM 13 C CAJ G4T . . . B 2 19.051 -18.132 -6.789 1 46.49 ? CAJ G4T 501 A 1 HETATM 14 C CAS G4T . . . B 2 18.186 -17.701 -7.79 1 45.02 ? CAS G4T 501 A 1 HETATM 15 C CBQ G4T . . . B 2 17.762 -16.378 -7.82 1 42.2 ? CBQ G4T 501 A 1 HETATM 16 N NBA G4T . . . B 2 16.929 -15.951 -8.781 1 41.15 ? NBA G4T 501 A 1 HETATM 17 C CBO G4T . . . B 2 16.497 -14.679 -8.847 1 40.01 ? CBO G4T 501 A 1 HETATM 18 C CBL G4T . . . B 2 15.621 -14.383 -9.894 1 39.25 ? CBL G4T 501 A 1 HETATM 19 C CAR G4T . . . B 2 14.373 -13.816 -9.642 1 37.98 ? CAR G4T 501 A 1 HETATM 20 C CAN G4T . . . B 2 13.501 -13.537 -10.686 1 32.95 ? CAN G4T 501 A 1 HETATM 21 C CAQ G4T . . . B 2 15.971 -14.702 -11.202 1 39.09 ? CAQ G4T 501 A 1 HETATM 22 C CAM G4T . . . B 2 15.096 -14.426 -12.25 1 35.82 ? CAM G4T 501 A 1 HETATM 23 C CBH G4T . . . B 2 13.857 -13.846 -11.992 1 40.07 ? CBH G4T 501 A 1 HETATM 24 C CAZ G4T . . . B 2 12.967 -13.56 -13.023 1 39.27 ? CAZ G4T 501 A 1 HETATM 25 N NBT G4T . . . B 2 12.845 -14.674 -13.978 1 44.6 ? NBT G4T 501 A 1 HETATM 26 C CAY G4T . . . B 2 12.053 -15.777 -13.392 1 41.94 ? CAY G4T 501 A 1 HETATM 27 C CAW G4T . . . B 2 11.901 -16.926 -14.379 1 47.01 ? CAW G4T 501 A 1 HETATM 28 C CAX G4T . . . B 2 12.156 -14.167 -15.171 1 48.45 ? CAX G4T 501 A 1 HETATM 29 C CAV G4T . . . B 2 12.013 -15.262 -16.218 1 47.7 ? CAV G4T 501 A 1 HETATM 30 C CBS G4T . . . B 2 11.209 -16.411 -15.635 1 49.92 ? CBS G4T 501 A 1 HETATM 31 N NBD G4T . . . B 2 11.135 -17.465 -16.655 1 55.62 ? NBD G4T 501 A 1 HETATM 32 C CBG G4T . . . B 2 10.009 -17.723 -17.331 1 63.04 ? CBG G4T 501 A 1 HETATM 33 O OAC G4T . . . B 2 8.975 -17.101 -17.087 1 64.99 ? OAC G4T 501 A 1 HETATM 34 N NBB G4T . . . B 2 10.076 -18.697 -18.259 1 68.8 ? NBB G4T 501 A 1 HETATM 35 C CBJ G4T . . . B 2 8.994 -19.024 -18.974 1 83.83 ? CBJ G4T 501 A 1 HETATM 36 C CAT G4T . . . B 2 8.263 -18.065 -19.675 1 88.96 ? CAT G4T 501 A 1 HETATM 37 C CAP G4T . . . B 2 8.614 -20.359 -19.046 1 91.08 ? CAP G4T 501 A 1 HETATM 38 C CAO G4T . . . B 2 7.5 -20.737 -19.789 1 93.19 ? CAO G4T 501 A 1 HETATM 39 C CBI G4T . . . B 2 6.763 -19.78 -20.476 1 97.77 ? CBI G4T 501 A 1 HETATM 40 CL CL G4T . . . B 2 5.382 -20.251 -21.396 1 123.19 ? CL G4T 501 A 1 HETATM 41 C CBM G4T . . . B 2 7.146 -18.447 -20.407 1 95.63 ? CBM G4T 501 A 1 HETATM 42 N NBC G4T . . . B 2 6.406 -17.574 -21.088 1 95.76 ? NBC G4T 501 A 1 HETATM 43 C CBF G4T . . . B 2 5.728 -16.638 -20.4 1 94.53 ? CBF G4T 501 A 1 HETATM 44 O OAB G4T . . . B 2 5.726 -16.535 -19.174 1 96.4 ? OAB G4T 501 A 1 HETATM 45 C CAF G4T . . . B 2 4.913 -15.676 -21.27 1 93.46 ? CAF G4T 501 A 1 HETATM 46 C CAA G4T . . . B 2 4.125 -14.604 -20.52 1 90.71 ? CAA G4T 501 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 46 #