data_6HHO # _model_server_result.job_id cbnEtQ59SQTuM7LNDYAqkQ _model_server_result.datetime_utc '2024-11-23 09:16:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6HHO # _exptl.entry_id 6HHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[4-[(5~{S})-5-[3,5-bis(fluoranyl)phenyl]pyrazolidin-1-yl]carbonylpiperidin-1-yl]pyrimidine-4-carbonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HHO _cell.length_a 102.649 _cell.length_b 130.37 _cell.length_c 50.839 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H20 F2 N6 O' _chem_comp.formula_weight 398.409 _chem_comp.id G4W _chem_comp.mon_nstd_flag . _chem_comp.name 6-[4-[(5~{S})-5-[3,5-bis(fluoranyl)phenyl]pyrazolidin-1-yl]carbonylpiperidin-1-yl]pyrimidine-4-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GSK547 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N29 C28 G4W trip 83 n n C28 C24 G4W sing 84 n n N25 C24 G4W doub 85 n y N25 C26 G4W sing 86 n y C24 C23 G4W sing 87 n y C26 N27 G4W doub 88 n y C23 C22 G4W doub 89 n y N27 C22 G4W sing 90 n y C22 N19 G4W sing 91 n n N19 C18 G4W sing 92 n n N19 C20 G4W sing 93 n n C18 C17 G4W sing 94 n n C17 C16 G4W sing 95 n n O15 C14 G4W doub 96 n n C20 C21 G4W sing 97 n n C21 C16 G4W sing 98 n n F01 C02 G4W sing 99 n n C16 C14 G4W sing 100 n n C14 N13 G4W sing 101 n n C08 C02 G4W doub 102 n y C08 C07 G4W sing 103 n y C02 C03 G4W sing 104 n y N13 C09 G4W sing 105 n n N13 N12 G4W sing 106 n n C09 C07 G4W sing 107 n n C09 C10 G4W sing 108 n n C07 C06 G4W doub 109 n y C03 C04 G4W doub 110 n y N12 C11 G4W sing 111 n n C06 C04 G4W sing 112 n y C04 F05 G4W sing 113 n n C10 C11 G4W sing 114 n n C10 H1 G4W sing 115 n n C10 H2 G4W sing 116 n n N12 H3 G4W sing 117 n n C17 H4 G4W sing 118 n n C17 H5 G4W sing 119 n n C20 H6 G4W sing 120 n n C20 H7 G4W sing 121 n n C21 H8 G4W sing 122 n n C21 H9 G4W sing 123 n n C26 H10 G4W sing 124 n n C18 H11 G4W sing 125 n n C18 H12 G4W sing 126 n n C11 H13 G4W sing 127 n n C11 H14 G4W sing 128 n n C16 H15 G4W sing 129 n n C09 H16 G4W sing 130 n n C06 H17 G4W sing 131 n n C03 H18 G4W sing 132 n n C23 H19 G4W sing 133 n n C08 H20 G4W sing 134 n n # _atom_sites.entry_id 6HHO _atom_sites.fract_transf_matrix[1][1] 0.009742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G4W A 1 301 1 G4W LIG . D 2 G4W B 1 301 2 G4W LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 G4W . . . D 2 -13.002 -34.19 17.224 1 97.84 ? C10 G4W 301 B 1 HETATM 2 N N12 G4W . . . D 2 -14.686 -35.315 18.327 1 99.06 ? N12 G4W 301 B 1 HETATM 3 C C17 G4W . . . D 2 -14.975 -39.38 19.671 1 95.73 ? C17 G4W 301 B 1 HETATM 4 C C20 G4W . . . D 2 -17.602 -38.397 18.965 1 96.93 ? C20 G4W 301 B 1 HETATM 5 C C21 G4W . . . D 2 -16.393 -38.094 18.087 1 96.54 ? C21 G4W 301 B 1 HETATM 6 C C22 G4W . . . D 2 -18.117 -40.772 19.285 1 94.34 ? C22 G4W 301 B 1 HETATM 7 C C24 G4W . . . D 2 -18.245 -43.033 18.596 1 90.76 ? C24 G4W 301 B 1 HETATM 8 C C26 G4W . . . D 2 -20.026 -41.665 18.461 1 93.98 ? C26 G4W 301 B 1 HETATM 9 C C28 G4W . . . D 2 -17.67 -44.345 18.371 1 87.32 ? C28 G4W 301 B 1 HETATM 10 N N19 G4W . . . D 2 -17.442 -39.653 19.707 1 95.77 ? N19 G4W 301 B 1 HETATM 11 C C18 G4W . . . D 2 -16.209 -39.706 20.512 1 95.42 ? C18 G4W 301 B 1 HETATM 12 C C11 G4W . . . D 2 -14.379 -34.244 17.729 1 98.35 ? C11 G4W 301 B 1 HETATM 13 F F01 G4W . . . D 2 -8.136 -37.573 17.379 1 106.78 ? F01 G4W 301 B 1 HETATM 14 C C16 G4W . . . D 2 -15.172 -38.022 18.993 1 96.85 ? C16 G4W 301 B 1 HETATM 15 F F05 G4W . . . D 2 -9.769 -35.53 21.264 1 104.26 ? F05 G4W 301 B 1 HETATM 16 N N13 G4W . . . D 2 -13.763 -36.258 17.957 1 99.54 ? N13 G4W 301 B 1 HETATM 17 O O15 G4W . . . D 2 -13.088 -38.405 17.879 1 102.6 ? O15 G4W 301 B 1 HETATM 18 C C09 G4W . . . D 2 -12.592 -35.677 17.253 1 98.27 ? C09 G4W 301 B 1 HETATM 19 N N27 G4W . . . D 2 -19.399 -40.585 18.939 1 93.93 ? N27 G4W 301 B 1 HETATM 20 C C06 G4W . . . D 2 -11.112 -35.555 19.322 1 103.62 ? C06 G4W 301 B 1 HETATM 21 C C04 G4W . . . D 2 -9.927 -35.883 19.958 1 104.88 ? C04 G4W 301 B 1 HETATM 22 C C03 G4W . . . D 2 -8.905 -36.569 19.348 1 104.67 ? C03 G4W 301 B 1 HETATM 23 C C14 G4W . . . D 2 -13.941 -37.598 18.213 1 100.15 ? C14 G4W 301 B 1 HETATM 24 C C02 G4W . . . D 2 -9.127 -36.927 18.037 1 104.73 ? C02 G4W 301 B 1 HETATM 25 C C07 G4W . . . D 2 -11.298 -35.937 17.99 1 100.51 ? C07 G4W 301 B 1 HETATM 26 N N25 G4W . . . D 2 -19.526 -42.879 18.219 1 91.99 ? N25 G4W 301 B 1 HETATM 27 N N29 G4W . . . D 2 -17.242 -45.389 18.203 1 84.88 ? N29 G4W 301 B 1 HETATM 28 C C23 G4W . . . D 2 -17.465 -42.009 19.128 1 93.08 ? C23 G4W 301 B 1 HETATM 29 C C08 G4W . . . D 2 -10.288 -36.65 17.353 1 101.97 ? C08 G4W 301 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 209 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #