data_6HIJ # _model_server_result.job_id '_IGrAVyJr9MrEynPXB0ZIA' _model_server_result.datetime_utc '2024-11-07 13:05:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hij # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6HIJ # _exptl.entry_id 6HIJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 749.073 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HIJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 592 A CYS 592 1_555 A SG CYS 608 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 603 A CYS 603 1_555 B SG CYS 603 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 592 B CYS 592 1_555 B SG CYS 608 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? covale ? covale1 A CD2 LEU 484 A LEU 484 1_555 H C27 CLR . A CLR 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? covale ? covale2 B CD2 LEU 484 B LEU 484 1_555 Q C27 CLR . B CLR 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.488 ? # _chem_comp.formula 'C41 H83 N O8 P 1' _chem_comp.formula_weight 749.073 _chem_comp.id PEE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # _atom_sites.entry_id 6HIJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEE A 1 701 4 PEE PEE . D 3 CLR A 1 702 1 CLR CLR . E 3 CLR A 1 703 2 CLR CLR . F 3 CLR A 1 704 3 CLR CLR . G 3 CLR A 1 705 4 CLR CLR . H 3 CLR A 1 706 5 CLR CLR . I 2 PEE A 1 707 1 PEE PEE . J 2 PEE A 1 708 2 PEE PEE . K 2 PEE A 1 709 3 PEE PEE . L 4 BWQ A 1 710 1 BWQ MZ . M 3 CLR B 1 701 1 CLR CLR . N 3 CLR B 1 702 2 CLR CLR . O 3 CLR B 1 703 3 CLR CLR . P 3 CLR B 1 704 4 CLR CLR . Q 3 CLR B 1 705 5 CLR CLR . R 2 PEE B 1 706 1 PEE PEE . S 2 PEE B 1 707 2 PEE PEE . T 2 PEE B 1 708 3 PEE PEE . U 2 PEE B 1 709 4 PEE PEE . V 4 BWQ B 1 710 1 BWQ MZ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PEE . . . C 2 134.83 112.671 134.14 1 43.79 ? C2 PEE 701 A 1 HETATM 2 C C1 PEE . . . C 2 133.866 111.527 134.273 1 43.79 ? C1 PEE 701 A 1 HETATM 3 N N PEE . . . C 2 132.112 105.378 132.335 1 43.79 ? N PEE 701 A 1 HETATM 4 C C3 PEE . . . C 2 134.639 113.317 132.796 1 43.79 ? C3 PEE 701 A 1 HETATM 5 C C4 PEE . . . C 2 132.269 107.633 131.357 1 43.79 ? C4 PEE 701 A 1 HETATM 6 C C5 PEE . . . C 2 133.017 106.51 132.013 1 43.79 ? C5 PEE 701 A 1 HETATM 7 C C10 PEE . . . C 2 134.985 113.478 136.418 1 43.79 ? C10 PEE 701 A 1 HETATM 8 C C11 PEE . . . C 2 134.768 114.697 137.258 1 43.79 ? C11 PEE 701 A 1 HETATM 9 C C12 PEE . . . C 2 136.062 115.441 137.555 1 43.79 ? C12 PEE 701 A 1 HETATM 10 C C13 PEE . . . C 2 136.941 114.745 138.592 1 43.79 ? C13 PEE 701 A 1 HETATM 11 C C14 PEE . . . C 2 136.191 114.25 139.821 1 43.79 ? C14 PEE 701 A 1 HETATM 12 C C15 PEE . . . C 2 136.483 115.023 141.098 1 43.79 ? C15 PEE 701 A 1 HETATM 13 C C16 PEE . . . C 2 136.238 116.517 140.983 1 43.79 ? C16 PEE 701 A 1 HETATM 14 C C17 PEE . . . C 2 136.364 117.298 142.274 1 43.79 ? C17 PEE 701 A 1 HETATM 15 C C18 PEE . . . C 2 135.034 117.585 142.939 1 43.79 ? C18 PEE 701 A 1 HETATM 16 C C19 PEE . . . C 2 134.555 116.496 143.873 1 43.79 ? C19 PEE 701 A 1 HETATM 17 C C30 PEE . . . C 2 134.664 115.521 131.959 1 43.79 ? C30 PEE 701 A 1 HETATM 18 C C31 PEE . . . C 2 135.492 116.76 131.797 1 43.79 ? C31 PEE 701 A 1 HETATM 19 C C32 PEE . . . C 2 135.246 117.78 132.895 1 43.79 ? C32 PEE 701 A 1 HETATM 20 C C33 PEE . . . C 2 136.133 119.003 132.776 1 43.79 ? C33 PEE 701 A 1 HETATM 21 C C34 PEE . . . C 2 136.478 119.602 134.122 1 43.79 ? C34 PEE 701 A 1 HETATM 22 C C35 PEE . . . C 2 137.271 118.66 135.013 1 43.79 ? C35 PEE 701 A 1 HETATM 23 C C36 PEE . . . C 2 137.3 119.105 136.461 1 43.79 ? C36 PEE 701 A 1 HETATM 24 C C37 PEE . . . C 2 138.291 118.369 137.342 1 43.79 ? C37 PEE 701 A 1 HETATM 25 C C38 PEE . . . C 2 138.202 118.814 138.79 1 43.79 ? C38 PEE 701 A 1 HETATM 26 C C39 PEE . . . C 2 139.359 118.394 139.675 1 43.79 ? C39 PEE 701 A 1 HETATM 27 C C40 PEE . . . C 2 139.594 119.388 140.798 1 43.79 ? C40 PEE 701 A 1 HETATM 28 C C41 PEE . . . C 2 140.544 118.932 141.887 1 43.79 ? C41 PEE 701 A 1 HETATM 29 C C42 PEE . . . C 2 140.711 119.966 142.984 1 43.79 ? C42 PEE 701 A 1 HETATM 30 C C43 PEE . . . C 2 141.413 119.444 144.221 1 43.79 ? C43 PEE 701 A 1 HETATM 31 C C44 PEE . . . C 2 140.686 118.326 144.946 1 43.79 ? C44 PEE 701 A 1 HETATM 32 C C45 PEE . . . C 2 141.349 117.948 146.259 1 43.79 ? C45 PEE 701 A 1 HETATM 33 C C46 PEE . . . C 2 140.565 116.962 147.095 1 43.79 ? C46 PEE 701 A 1 HETATM 34 C C47 PEE . . . C 2 141.194 116.709 148.442 1 43.79 ? C47 PEE 701 A 1 HETATM 35 O O4 PEE . . . C 2 135.51 112.467 136.801 1 43.79 ? O4 PEE 701 A 1 HETATM 36 O O5 PEE . . . C 2 133.573 115.36 131.482 1 43.79 ? O5 PEE 701 A 1 HETATM 37 O O2 PEE . . . C 2 134.533 113.673 135.166 1 43.79 ? O2 PEE 701 A 1 HETATM 38 O O3 PEE . . . C 2 135.292 114.603 132.698 1 43.79 ? O3 PEE 701 A 1 HETATM 39 O O1P PEE . . . C 2 132.43 109.025 134.035 1 43.79 ? O1P PEE 701 A 1 HETATM 40 O O2P PEE . . . C 2 131.449 110.667 132.396 1 43.79 ? O2P PEE 701 A 1 HETATM 41 O O3P PEE . . . C 2 133.821 110.812 133.025 1 43.79 ? O3P PEE 701 A 1 HETATM 42 O O4P PEE . . . C 2 133.003 108.873 131.492 1 43.79 ? O4P PEE 701 A 1 HETATM 43 P P PEE . . . C 2 132.635 109.803 132.799 1 43.79 ? P PEE 701 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #