data_6HIJ
#
_model_server_result.job_id            a0ppqr-M6uBAW88hfYzI0A 
_model_server_result.datetime_utc      '2025-04-13 17:57:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hij 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    6HIJ 
#
_exptl.entry_id    6HIJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HIJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HIJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 592 A CYS 592 1_555 A SG CYS 608 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf2 A SG CYS 603 A CYS 603 1_555 B SG CYS 603 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 B SG CYS 592 B CYS 592 1_555 B SG CYS 608 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
covale ? covale1 A CD2 LEU 484 A LEU 484 1_555 H C27 CLR . A CLR 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? 
covale ? covale2 B CD2 LEU 484 B LEU 484 1_555 Q C27 CLR . B CLR 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.488 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C5 PEE sing 395 n n 
C5 C4 PEE sing 396 n n 
C4 O4P PEE sing 397 n n 
O4P P PEE sing 398 n n 
O1P P PEE doub 399 n n 
C1 O3P PEE sing 400 n n 
C1 C2 PEE sing 401 n n 
O3P P PEE sing 402 n n 
P O2P PEE sing 403 n n 
C2 C3 PEE sing 404 n n 
C2 O2 PEE sing 405 n n 
C3 O3 PEE sing 406 n n 
O2 C10 PEE sing 407 n n 
C31 C30 PEE sing 408 n n 
C31 C32 PEE sing 409 n n 
C33 C32 PEE sing 410 n n 
C33 C34 PEE sing 411 n n 
C30 O3 PEE sing 412 n n 
C30 O5 PEE doub 413 n n 
C10 O4 PEE doub 414 n n 
C10 C11 PEE sing 415 n n 
C34 C35 PEE sing 416 n n 
C11 C12 PEE sing 417 n n 
C35 C36 PEE sing 418 n n 
C36 C37 PEE sing 419 n n 
C37 C38 PEE sing 420 n n 
C38 C39 PEE doub 421 z n 
C12 C13 PEE sing 422 n n 
C39 C40 PEE sing 423 n n 
C13 C14 PEE sing 424 n n 
C14 C15 PEE sing 425 n n 
C40 C41 PEE sing 426 n n 
C15 C16 PEE sing 427 n n 
C41 C42 PEE sing 428 n n 
C16 C17 PEE sing 429 n n 
C42 C43 PEE sing 430 n n 
C17 C18 PEE sing 431 n n 
C43 C44 PEE sing 432 n n 
C18 C19 PEE doub 433 z n 
C46 C47 PEE sing 434 n n 
C46 C45 PEE sing 435 n n 
C44 C45 PEE sing 436 n n 
C19 C20 PEE sing 437 n n 
C20 C21 PEE sing 438 n n 
C21 C22 PEE sing 439 n n 
C22 C23 PEE sing 440 n n 
C23 C24 PEE sing 441 n n 
C24 C25 PEE sing 442 n n 
C26 C25 PEE sing 443 n n 
C26 C27 PEE sing 444 n n 
C27 H7 PEE sing 445 n n 
C27 H8 PEE sing 446 n n 
C27 H82 PEE sing 447 n n 
C26 H5 PEE sing 448 n n 
C26 H6 PEE sing 449 n n 
C25 H12 PEE sing 450 n n 
C25 H4 PEE sing 451 n n 
C24 H10 PEE sing 452 n n 
C24 H11 PEE sing 453 n n 
C23 H83 PEE sing 454 n n 
C23 H9 PEE sing 455 n n 
C22 H2 PEE sing 456 n n 
C22 H3 PEE sing 457 n n 
C21 H14 PEE sing 458 n n 
C21 H1 PEE sing 459 n n 
C20 H16 PEE sing 460 n n 
C20 H13 PEE sing 461 n n 
C19 H18 PEE sing 462 n n 
C18 H20 PEE sing 463 n n 
C17 H22 PEE sing 464 n n 
C17 H19 PEE sing 465 n n 
C16 H21 PEE sing 466 n n 
C16 H28 PEE sing 467 n n 
C15 H23 PEE sing 468 n n 
C15 H24 PEE sing 469 n n 
C14 H25 PEE sing 470 n n 
C14 H26 PEE sing 471 n n 
C13 H17 PEE sing 472 n n 
C13 H27 PEE sing 473 n n 
C12 H15 PEE sing 474 n n 
C12 H29 PEE sing 475 n n 
C11 H30 PEE sing 476 n n 
C11 H31 PEE sing 477 n n 
C2 H32 PEE sing 478 n n 
C1 H33 PEE sing 479 n n 
C1 H34 PEE sing 480 n n 
O2P H35 PEE sing 481 n n 
C4 H36 PEE sing 482 n n 
C4 H37 PEE sing 483 n n 
C5 H38 PEE sing 484 n n 
C5 H39 PEE sing 485 n n 
N H40 PEE sing 486 n n 
N H41 PEE sing 487 n n 
C3 H43 PEE sing 488 n n 
C3 H44 PEE sing 489 n n 
C31 H45 PEE sing 490 n n 
C31 H46 PEE sing 491 n n 
C32 H47 PEE sing 492 n n 
C32 H48 PEE sing 493 n n 
C33 H49 PEE sing 494 n n 
C33 H50 PEE sing 495 n n 
C34 H51 PEE sing 496 n n 
C34 H52 PEE sing 497 n n 
C35 H53 PEE sing 498 n n 
C35 H54 PEE sing 499 n n 
C36 H55 PEE sing 500 n n 
C36 H56 PEE sing 501 n n 
C37 H57 PEE sing 502 n n 
C37 H58 PEE sing 503 n n 
C38 H59 PEE sing 504 n n 
C39 H60 PEE sing 505 n n 
C40 H81 PEE sing 506 n n 
C40 H61 PEE sing 507 n n 
C41 H80 PEE sing 508 n n 
C41 H62 PEE sing 509 n n 
C42 H63 PEE sing 510 n n 
C42 H64 PEE sing 511 n n 
C43 H65 PEE sing 512 n n 
C43 H66 PEE sing 513 n n 
C44 H67 PEE sing 514 n n 
C44 H68 PEE sing 515 n n 
C45 H69 PEE sing 516 n n 
C45 H70 PEE sing 517 n n 
C46 H71 PEE sing 518 n n 
C46 H72 PEE sing 519 n n 
C47 H73 PEE sing 520 n n 
C47 H74 PEE sing 521 n n 
C47 H75 PEE sing 522 n n 
#
_atom_sites.entry_id                     6HIJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PEE A 1 701 4 PEE PEE . 
D 3 CLR A 1 702 1 CLR CLR . 
E 3 CLR A 1 703 2 CLR CLR . 
F 3 CLR A 1 704 3 CLR CLR . 
G 3 CLR A 1 705 4 CLR CLR . 
H 3 CLR A 1 706 5 CLR CLR . 
I 2 PEE A 1 707 1 PEE PEE . 
J 2 PEE A 1 708 2 PEE PEE . 
K 2 PEE A 1 709 3 PEE PEE . 
L 4 BWQ A 1 710 1 BWQ MZ . 
M 3 CLR B 1 701 1 CLR CLR . 
N 3 CLR B 1 702 2 CLR CLR . 
O 3 CLR B 1 703 3 CLR CLR . 
P 3 CLR B 1 704 4 CLR CLR . 
Q 3 CLR B 1 705 5 CLR CLR . 
R 2 PEE B 1 706 1 PEE PEE . 
S 2 PEE B 1 707 2 PEE PEE . 
T 2 PEE B 1 708 3 PEE PEE . 
U 2 PEE B 1 709 4 PEE PEE . 
V 4 BWQ B 1 710 1 BWQ MZ . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C19 PEE . . . C 2 134.555 116.496 143.873 1 43.79 ? C19 PEE 701 A 1 
HETATM 2 C C18 PEE . . . C 2 135.034 117.585 142.939 1 43.79 ? C18 PEE 701 A 1 
HETATM 3 C C17 PEE . . . C 2 136.364 117.298 142.274 1 43.79 ? C17 PEE 701 A 1 
HETATM 4 C C16 PEE . . . C 2 136.238 116.517 140.983 1 43.79 ? C16 PEE 701 A 1 
HETATM 5 C C15 PEE . . . C 2 136.483 115.023 141.098 1 43.79 ? C15 PEE 701 A 1 
HETATM 6 C C14 PEE . . . C 2 136.191 114.25 139.821 1 43.79 ? C14 PEE 701 A 1 
HETATM 7 C C13 PEE . . . C 2 136.941 114.745 138.592 1 43.79 ? C13 PEE 701 A 1 
HETATM 8 C C12 PEE . . . C 2 136.062 115.441 137.555 1 43.79 ? C12 PEE 701 A 1 
HETATM 9 C C11 PEE . . . C 2 134.768 114.697 137.258 1 43.79 ? C11 PEE 701 A 1 
HETATM 10 C C10 PEE . . . C 2 134.985 113.478 136.418 1 43.79 ? C10 PEE 701 A 1 
HETATM 11 O O4 PEE . . . C 2 135.51 112.467 136.801 1 43.79 ? O4 PEE 701 A 1 
HETATM 12 O O2 PEE . . . C 2 134.533 113.673 135.166 1 43.79 ? O2 PEE 701 A 1 
HETATM 13 C C2 PEE . . . C 2 134.83 112.671 134.14 1 43.79 ? C2 PEE 701 A 1 
HETATM 14 C C1 PEE . . . C 2 133.866 111.527 134.273 1 43.79 ? C1 PEE 701 A 1 
HETATM 15 O O3P PEE . . . C 2 133.821 110.812 133.025 1 43.79 ? O3P PEE 701 A 1 
HETATM 16 P P PEE . . . C 2 132.635 109.803 132.799 1 43.79 ? P PEE 701 A 1 
HETATM 17 O O2P PEE . . . C 2 131.449 110.667 132.396 1 43.79 ? O2P PEE 701 A 1 
HETATM 18 O O1P PEE . . . C 2 132.43 109.025 134.035 1 43.79 ? O1P PEE 701 A 1 
HETATM 19 O O4P PEE . . . C 2 133.003 108.873 131.492 1 43.79 ? O4P PEE 701 A 1 
HETATM 20 C C4 PEE . . . C 2 132.269 107.633 131.357 1 43.79 ? C4 PEE 701 A 1 
HETATM 21 C C5 PEE . . . C 2 133.017 106.51 132.013 1 43.79 ? C5 PEE 701 A 1 
HETATM 22 N N PEE . . . C 2 132.112 105.378 132.335 1 43.79 ? N PEE 701 A 1 
HETATM 23 C C3 PEE . . . C 2 134.639 113.317 132.796 1 43.79 ? C3 PEE 701 A 1 
HETATM 24 O O3 PEE . . . C 2 135.292 114.603 132.698 1 43.79 ? O3 PEE 701 A 1 
HETATM 25 C C30 PEE . . . C 2 134.664 115.521 131.959 1 43.79 ? C30 PEE 701 A 1 
HETATM 26 O O5 PEE . . . C 2 133.573 115.36 131.482 1 43.79 ? O5 PEE 701 A 1 
HETATM 27 C C31 PEE . . . C 2 135.492 116.76 131.797 1 43.79 ? C31 PEE 701 A 1 
HETATM 28 C C32 PEE . . . C 2 135.246 117.78 132.895 1 43.79 ? C32 PEE 701 A 1 
HETATM 29 C C33 PEE . . . C 2 136.133 119.003 132.776 1 43.79 ? C33 PEE 701 A 1 
HETATM 30 C C34 PEE . . . C 2 136.478 119.602 134.122 1 43.79 ? C34 PEE 701 A 1 
HETATM 31 C C35 PEE . . . C 2 137.271 118.66 135.013 1 43.79 ? C35 PEE 701 A 1 
HETATM 32 C C36 PEE . . . C 2 137.3 119.105 136.461 1 43.79 ? C36 PEE 701 A 1 
HETATM 33 C C37 PEE . . . C 2 138.291 118.369 137.342 1 43.79 ? C37 PEE 701 A 1 
HETATM 34 C C38 PEE . . . C 2 138.202 118.814 138.79 1 43.79 ? C38 PEE 701 A 1 
HETATM 35 C C39 PEE . . . C 2 139.359 118.394 139.675 1 43.79 ? C39 PEE 701 A 1 
HETATM 36 C C40 PEE . . . C 2 139.594 119.388 140.798 1 43.79 ? C40 PEE 701 A 1 
HETATM 37 C C41 PEE . . . C 2 140.544 118.932 141.887 1 43.79 ? C41 PEE 701 A 1 
HETATM 38 C C42 PEE . . . C 2 140.711 119.966 142.984 1 43.79 ? C42 PEE 701 A 1 
HETATM 39 C C43 PEE . . . C 2 141.413 119.444 144.221 1 43.79 ? C43 PEE 701 A 1 
HETATM 40 C C44 PEE . . . C 2 140.686 118.326 144.946 1 43.79 ? C44 PEE 701 A 1 
HETATM 41 C C45 PEE . . . C 2 141.349 117.948 146.259 1 43.79 ? C45 PEE 701 A 1 
HETATM 42 C C46 PEE . . . C 2 140.565 116.962 147.095 1 43.79 ? C46 PEE 701 A 1 
HETATM 43 C C47 PEE . . . C 2 141.194 116.709 148.442 1 43.79 ? C47 PEE 701 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#