data_6HIT
#
_model_server_result.job_id            VR9oXm8YJTVp3aHXdrxWzw 
_model_server_result.datetime_utc      '2024-10-19 15:31:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hit 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":201}' 
#
_entry.id    6HIT 
#
_exptl.entry_id    6HIT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HIT 
_cell.length_a            62.691 
_cell.length_b            103.257 
_cell.length_c            199.352 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HIT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L 1 1 
E,F,G,H,M,N,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O ACE 1 C ACE 1 1_555 C N SER 2 C SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.239 ? 
covale ? covale2 G O ACE 1 G ACE 1 1_555 G N SER 2 G SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? 
metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 I FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc2 B NE2 HIS 92 B HIS 93 1_555 J FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc3 C NE2 HIS 89 C HIS 89 1_555 K FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc4 D NE2 HIS 92 D HIS 93 1_555 L FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc5 E NE2 HIS 89 E HIS 89 1_555 M FE HEM . E HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc6 F NE2 HIS 92 F HIS 93 1_555 N FE HEM . F HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc7 G NE2 HIS 89 G HIS 89 1_555 O FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc8 H NE2 HIS 92 H HIS 93 1_555 P FE HEM . H HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 135 n n 
CHA C4D HEM doub 136 n n 
CHA HHA HEM sing 137 n n 
CHB C4A HEM sing 138 n n 
CHB C1B HEM doub 139 n n 
CHB HHB HEM sing 140 n n 
CHC C4B HEM sing 141 n n 
CHC C1C HEM doub 142 n n 
CHC HHC HEM sing 143 n n 
CHD C4C HEM doub 144 n n 
CHD C1D HEM sing 145 n n 
CHD HHD HEM sing 146 n n 
C1A C2A HEM doub 147 n y 
C1A NA HEM sing 148 n y 
C2A C3A HEM sing 149 n y 
C2A CAA HEM sing 150 n n 
C3A C4A HEM doub 151 n y 
C3A CMA HEM sing 152 n n 
C4A NA HEM sing 153 n y 
CMA HMA HEM sing 154 n n 
CMA HMAA HEM sing 155 n n 
CMA HMAB HEM sing 156 n n 
CAA CBA HEM sing 157 n n 
CAA HAA HEM sing 158 n n 
CAA HAAA HEM sing 159 n n 
CBA CGA HEM sing 160 n n 
CBA HBA HEM sing 161 n n 
CBA HBAA HEM sing 162 n n 
CGA O1A HEM doub 163 n n 
CGA O2A HEM sing 164 n n 
C1B C2B HEM sing 165 n n 
C1B NB HEM sing 166 n n 
C2B C3B HEM doub 167 n n 
C2B CMB HEM sing 168 n n 
C3B C4B HEM sing 169 n n 
C3B CAB HEM sing 170 n n 
C4B NB HEM doub 171 n n 
CMB HMB HEM sing 172 n n 
CMB HMBA HEM sing 173 n n 
CMB HMBB HEM sing 174 n n 
CAB CBB HEM doub 175 n n 
CAB HAB HEM sing 176 n n 
CBB HBB HEM sing 177 n n 
CBB HBBA HEM sing 178 n n 
C1C C2C HEM sing 179 n y 
C1C NC HEM sing 180 n y 
C2C C3C HEM doub 181 n y 
C2C CMC HEM sing 182 n n 
C3C C4C HEM sing 183 n y 
C3C CAC HEM sing 184 n n 
C4C NC HEM sing 185 n y 
CMC HMC HEM sing 186 n n 
CMC HMCA HEM sing 187 n n 
CMC HMCB HEM sing 188 n n 
CAC CBC HEM doub 189 n n 
CAC HAC HEM sing 190 n n 
CBC HBC HEM sing 191 n n 
CBC HBCA HEM sing 192 n n 
C1D C2D HEM sing 193 n n 
C1D ND HEM doub 194 n n 
C2D C3D HEM doub 195 n n 
C2D CMD HEM sing 196 n n 
C3D C4D HEM sing 197 n n 
C3D CAD HEM sing 198 n n 
C4D ND HEM sing 199 n n 
CMD HMD HEM sing 200 n n 
CMD HMDA HEM sing 201 n n 
CMD HMDB HEM sing 202 n n 
CAD CBD HEM sing 203 n n 
CAD HAD HEM sing 204 n n 
CAD HADA HEM sing 205 n n 
CBD CGD HEM sing 206 n n 
CBD HBD HEM sing 207 n n 
CBD HBDA HEM sing 208 n n 
CGD O1D HEM doub 209 n n 
CGD O2D HEM sing 210 n n 
O2A H2A HEM sing 211 n n 
O2D H2D HEM sing 212 n n 
FE NA HEM sing 213 n n 
FE NB HEM sing 214 n n 
FE NC HEM sing 215 n n 
FE ND HEM sing 216 n n 
#
_atom_sites.entry_id                     6HIT 
_atom_sites.fract_transf_matrix[1][1]    0.015951 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009685 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005016 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 HEM A 1 201 144 HEM HEM . 
J 3 HEM B 1 201 148 HEM HEM . 
K 3 HEM C 1 201 144 HEM HEM . 
L 3 HEM D 1 201 148 HEM HEM . 
M 3 HEM E 1 201 144 HEM HEM . 
N 3 HEM F 1 201 148 HEM HEM . 
O 3 HEM G 1 201 144 HEM HEM . 
P 3 HEM H 1 201 148 HEM HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . L 3 18.285 16.768 189.484 1 39.44 ? CHA HEM 201 D 1 
HETATM 2 C CHB HEM . . . L 3 21.83 13.859 191.015 1 43.37 ? CHB HEM 201 D 1 
HETATM 3 C CHC HEM . . . L 3 18.42 10.725 192.434 1 44.83 ? CHC HEM 201 D 1 
HETATM 4 C CHD HEM . . . L 3 14.901 13.556 190.847 1 49.23 ? CHD HEM 201 D 1 
HETATM 5 C C1A HEM . . . L 3 19.505 16.261 189.77 1 38.44 ? C1A HEM 201 D 1 
HETATM 6 C C2A HEM . . . L 3 20.743 16.868 189.422 1 44.71 ? C2A HEM 201 D 1 
HETATM 7 C C3A HEM . . . L 3 21.738 16.053 189.857 1 40.34 ? C3A HEM 201 D 1 
HETATM 8 C C4A HEM . . . L 3 21.128 14.929 190.453 1 44.36 ? C4A HEM 201 D 1 
HETATM 9 C CMA HEM . . . L 3 23.224 16.234 189.748 1 39.5 ? CMA HEM 201 D 1 
HETATM 10 C CAA HEM . . . L 3 20.906 18.197 188.715 1 47.56 ? CAA HEM 201 D 1 
HETATM 11 C CBA HEM . . . L 3 20.445 19.334 189.641 1 54.22 ? CBA HEM 201 D 1 
HETATM 12 C CGA HEM . . . L 3 21.581 20.245 190.01 1 58.31 ? CGA HEM 201 D 1 
HETATM 13 O O1A HEM . . . L 3 21.844 20.526 191.202 1 65.01 ? O1A HEM 201 D 1 
HETATM 14 O O2A HEM . . . L 3 22.244 20.746 189.097 1 58.75 ? O2A HEM 201 D 1 
HETATM 15 C C1B HEM . . . L 3 21.193 12.729 191.554 1 44.84 ? C1B HEM 201 D 1 
HETATM 16 C C2B HEM . . . L 3 21.911 11.63 192.143 1 46.28 ? C2B HEM 201 D 1 
HETATM 17 C C3B HEM . . . L 3 20.951 10.725 192.541 1 45.19 ? C3B HEM 201 D 1 
HETATM 18 C C4B HEM . . . L 3 19.639 11.337 192.174 1 43.61 ? C4B HEM 201 D 1 
HETATM 19 C CMB HEM . . . L 3 23.421 11.495 192.3 1 47.2 ? CMB HEM 201 D 1 
HETATM 20 C CAB HEM . . . L 3 21.074 9.385 193.185 1 42.65 ? CAB HEM 201 D 1 
HETATM 21 C CBB HEM . . . L 3 22.199 8.747 193.451 1 45.26 ? CBB HEM 201 D 1 
HETATM 22 C C1C HEM . . . L 3 17.146 11.174 192.13 1 43.46 ? C1C HEM 201 D 1 
HETATM 23 C C2C HEM . . . L 3 15.981 10.396 192.119 1 45.29 ? C2C HEM 201 D 1 
HETATM 24 C C3C HEM . . . L 3 14.954 11.211 191.673 1 47.43 ? C3C HEM 201 D 1 
HETATM 25 C C4C HEM . . . L 3 15.542 12.471 191.381 1 48.27 ? C4C HEM 201 D 1 
HETATM 26 C CMC HEM . . . L 3 15.878 8.951 192.567 1 46.23 ? CMC HEM 201 D 1 
HETATM 27 C CAC HEM . . . L 3 13.524 10.884 191.479 1 51.06 ? CAC HEM 201 D 1 
HETATM 28 C CBC HEM . . . L 3 12.992 9.659 191.588 1 56.92 ? CBC HEM 201 D 1 
HETATM 29 C C1D HEM . . . L 3 15.597 14.658 190.358 1 48.44 ? C1D HEM 201 D 1 
HETATM 30 C C2D HEM . . . L 3 14.864 15.804 189.767 1 52.59 ? C2D HEM 201 D 1 
HETATM 31 C C3D HEM . . . L 3 15.803 16.716 189.396 1 50.26 ? C3D HEM 201 D 1 
HETATM 32 C C4D HEM . . . L 3 17.099 16.098 189.748 1 46.59 ? C4D HEM 201 D 1 
HETATM 33 C CMD HEM . . . L 3 13.356 15.955 189.586 1 49.94 ? CMD HEM 201 D 1 
HETATM 34 C CAD HEM . . . L 3 15.514 18.039 188.704 1 50.28 ? CAD HEM 201 D 1 
HETATM 35 C CBD HEM . . . L 3 15.317 17.672 187.224 1 56.01 ? CBD HEM 201 D 1 
HETATM 36 C CGD HEM . . . L 3 14.98 18.859 186.359 1 60.62 ? CGD HEM 201 D 1 
HETATM 37 O O1D HEM . . . L 3 13.788 19.259 186.271 1 65.02 ? O1D HEM 201 D 1 
HETATM 38 O O2D HEM . . . L 3 15.891 19.422 185.709 1 56.32 ? O2D HEM 201 D 1 
HETATM 39 N NA HEM . . . L 3 19.748 15.046 190.345 1 45.27 ? NA HEM 201 D 1 
HETATM 40 N NB HEM . . . L 3 19.865 12.507 191.624 1 41.81 ? NB HEM 201 D 1 
HETATM 41 N NC HEM . . . L 3 16.882 12.368 191.589 1 47.29 ? NC HEM 201 D 1 
HETATM 42 N ND HEM . . . L 3 16.928 14.868 190.331 1 46.36 ? ND HEM 201 D 1 
HETATM 43 FE FE HEM . . . L 3 18.325 13.742 190.955 1 41.75 ? FE HEM 201 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#