data_6HJI # _model_server_result.job_id 4v4k9kqcWzAbCNN-SDlMpA _model_server_result.datetime_utc '2024-11-08 12:27:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hji # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":407}' # _entry.id 6HJI # _exptl.entry_id 6HJI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 86.089 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BUTENOIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.96 _cell.angle_gamma 90 _cell.entry_id 6HJI _cell.length_a 180.943 _cell.length_b 133.242 _cell.length_c 159.88 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HJI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 W N N ? 6 X N N ? 6 MA N N ? 6 NA N N ? 6 VA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 71 A ILE 71 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc2 B O PRO 68 B PRO 68 1_555 U NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? metalc ? metalc3 B O ILE 71 B ILE 71 1_555 U NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc4 C O ILE 71 C ILE 71 1_555 DA NA NA . C NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc5 D O ILE 71 D ILE 71 1_555 KA NA NA . D NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc6 E O PRO 68 E PRO 68 1_555 TA NA NA . E NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc7 E O ILE 71 E ILE 71 1_555 TA NA NA . E NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? # _chem_comp.formula 'C4 H6 O2' _chem_comp.formula_weight 86.089 _chem_comp.id BEO _chem_comp.mon_nstd_flag . _chem_comp.name 'BUTENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BEO doub 70 n n C1 O2 BEO sing 71 n n C1 C2 BEO sing 72 n n O2 HO2 BEO sing 73 n n C2 C3 BEO doub 74 e n C2 H2 BEO sing 75 n n C3 C4 BEO sing 76 n n C3 H3 BEO sing 77 n n C4 H41 BEO sing 78 n n C4 H42 BEO sing 79 n n C4 H43 BEO sing 80 n n # _atom_sites.entry_id 6HJI _atom_sites.fract_transf_matrix[1][1] 0.005527 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001171 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PLC A 1 401 402 PLC PLC . G 2 PLC A 1 402 403 PLC PLC . H 2 PLC A 1 403 404 PLC PLC . I 3 CL A 1 404 405 CL CL . J 3 CL A 1 405 406 CL CL . K 3 CL A 1 406 407 CL CL . L 4 NA A 1 407 408 NA NA . M 4 NA A 1 408 409 NA NA . N 5 LMT A 1 409 411 LMT LMT . O 5 LMT A 1 410 412 LMT LMT . P 3 CL A 1 411 4 CL CL . Q 2 PLC B 1 401 402 PLC PLC . R 2 PLC B 1 402 403 PLC PLC . S 2 PLC B 1 403 404 PLC PLC . T 3 CL B 1 404 405 CL CL . U 4 NA B 1 405 406 NA NA . V 5 LMT B 1 406 408 LMT LMT . W 6 BEO B 1 407 4 BEO CRO . X 6 BEO B 1 408 6 BEO CRO . Y 3 CL B 1 409 5 CL CL . Z 2 PLC C 1 401 402 PLC PLC . AA 2 PLC C 1 402 403 PLC PLC . BA 2 PLC C 1 403 404 PLC PLC . CA 3 CL C 1 404 405 CL CL . DA 4 NA C 1 405 406 NA NA . EA 5 LMT C 1 406 408 LMT LMT . FA 3 CL C 1 407 1 CL CL . GA 2 PLC D 1 401 402 PLC PLC . HA 2 PLC D 1 402 403 PLC PLC . IA 2 PLC D 1 403 404 PLC PLC . JA 3 CL D 1 404 405 CL CL . KA 4 NA D 1 405 406 NA NA . LA 5 LMT D 1 406 408 LMT LMT . MA 6 BEO D 1 407 3 BEO CRO . NA 6 BEO D 1 408 7 BEO CRO . OA 3 CL D 1 409 2 CL CL . PA 2 PLC E 1 401 402 PLC PLC . QA 2 PLC E 1 402 403 PLC PLC . RA 2 PLC E 1 403 404 PLC PLC . SA 3 CL E 1 404 405 CL CL . TA 4 NA E 1 405 406 NA NA . UA 5 LMT E 1 406 408 LMT LMT . VA 6 BEO E 1 407 5 BEO CRO . WA 3 CL E 1 408 3 CL CL . XA 7 HOH A 1 501 530 HOH HOH . XA 7 HOH A 2 502 3 HOH HOH . XA 7 HOH A 3 503 587 HOH HOH . XA 7 HOH A 4 504 21 HOH HOH . XA 7 HOH A 5 505 531 HOH HOH . XA 7 HOH A 6 506 589 HOH HOH . XA 7 HOH A 7 507 573 HOH HOH . XA 7 HOH A 8 508 517 HOH HOH . XA 7 HOH A 9 509 26 HOH HOH . XA 7 HOH A 10 510 503 HOH HOH . XA 7 HOH A 11 511 594 HOH HOH . XA 7 HOH A 12 512 20 HOH HOH . YA 7 HOH B 1 501 556 HOH HOH . YA 7 HOH B 2 502 526 HOH HOH . YA 7 HOH B 3 503 4 HOH HOH . YA 7 HOH B 4 504 557 HOH HOH . YA 7 HOH B 5 505 5 HOH HOH . YA 7 HOH B 6 506 609 HOH HOH . YA 7 HOH B 7 507 564 HOH HOH . YA 7 HOH B 8 508 521 HOH HOH . YA 7 HOH B 9 509 547 HOH HOH . YA 7 HOH B 10 510 535 HOH HOH . YA 7 HOH B 11 511 553 HOH HOH . YA 7 HOH B 12 512 560 HOH HOH . YA 7 HOH B 13 513 608 HOH HOH . YA 7 HOH B 14 514 555 HOH HOH . YA 7 HOH B 15 515 23 HOH HOH . YA 7 HOH B 16 516 559 HOH HOH . YA 7 HOH B 17 517 561 HOH HOH . YA 7 HOH B 18 518 540 HOH HOH . YA 7 HOH B 19 519 582 HOH HOH . YA 7 HOH B 20 520 591 HOH HOH . ZA 7 HOH C 1 501 564 HOH HOH . ZA 7 HOH C 2 502 555 HOH HOH . ZA 7 HOH C 3 503 550 HOH HOH . ZA 7 HOH C 4 504 2 HOH HOH . ZA 7 HOH C 5 505 514 HOH HOH . ZA 7 HOH C 6 506 22 HOH HOH . ZA 7 HOH C 7 507 565 HOH HOH . ZA 7 HOH C 8 508 549 HOH HOH . ZA 7 HOH C 9 509 1 HOH HOH . ZA 7 HOH C 10 510 621 HOH HOH . ZA 7 HOH C 11 511 553 HOH HOH . ZA 7 HOH C 12 512 598 HOH HOH . ZA 7 HOH C 13 513 503 HOH HOH . ZA 7 HOH C 14 514 15 HOH HOH . ZA 7 HOH C 15 515 576 HOH HOH . AB 7 HOH D 1 501 554 HOH HOH . AB 7 HOH D 2 502 512 HOH HOH . AB 7 HOH D 3 503 8 HOH HOH . AB 7 HOH D 4 504 9 HOH HOH . AB 7 HOH D 5 505 515 HOH HOH . AB 7 HOH D 6 506 541 HOH HOH . AB 7 HOH D 7 507 539 HOH HOH . AB 7 HOH D 8 508 540 HOH HOH . AB 7 HOH D 9 509 516 HOH HOH . AB 7 HOH D 10 510 575 HOH HOH . AB 7 HOH D 11 511 18 HOH HOH . AB 7 HOH D 12 512 603 HOH HOH . AB 7 HOH D 13 513 542 HOH HOH . AB 7 HOH D 14 514 16 HOH HOH . AB 7 HOH D 15 515 24 HOH HOH . AB 7 HOH D 16 516 579 HOH HOH . BB 7 HOH E 1 501 10 HOH HOH . BB 7 HOH E 2 502 558 HOH HOH . BB 7 HOH E 3 503 528 HOH HOH . BB 7 HOH E 4 504 14 HOH HOH . BB 7 HOH E 5 505 561 HOH HOH . BB 7 HOH E 6 506 588 HOH HOH . BB 7 HOH E 7 507 515 HOH HOH . BB 7 HOH E 8 508 11 HOH HOH . BB 7 HOH E 9 509 7 HOH HOH . BB 7 HOH E 10 510 522 HOH HOH . BB 7 HOH E 11 511 19 HOH HOH . BB 7 HOH E 12 512 555 HOH HOH . BB 7 HOH E 13 513 13 HOH HOH . BB 7 HOH E 14 514 12 HOH HOH . BB 7 HOH E 15 515 536 HOH HOH . BB 7 HOH E 16 516 556 HOH HOH . BB 7 HOH E 17 517 504 HOH HOH . BB 7 HOH E 18 518 25 HOH HOH . BB 7 HOH E 19 519 577 HOH HOH . BB 7 HOH E 20 520 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BEO . . . W 6 19.488 -15.932 19.785 1 137.55 ? C1 BEO 407 B 1 HETATM 2 O O1 BEO . . . W 6 20.445 -16.074 19.05 1 137.37 ? O1 BEO 407 B 1 HETATM 3 O O2 BEO . . . W 6 18.315 -16.332 19.473 1 136.5 ? O2 BEO 407 B 1 HETATM 4 C C2 BEO . . . W 6 19.595 -15.31 21.121 1 138.01 ? C2 BEO 407 B 1 HETATM 5 C C3 BEO . . . W 6 18.57 -15.198 21.922 1 138.63 ? C3 BEO 407 B 1 HETATM 6 C C4 BEO . . . W 6 18.609 -14.599 23.277 1 136.08 ? C4 BEO 407 B 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #