data_6HJJ # _model_server_result.job_id CK0RggErHsjFZTz9gANwZA _model_server_result.datetime_utc '2025-01-25 11:04:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hjj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6HJJ # _exptl.entry_id 6HJJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 528.501 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-(4-azanyl-1-propan-2-yl-pyrazolo[3,4-d]pyrimidin-3-yl)-3-methyl-phenyl]-4-[4-fluoranyl-3-(trifluoromethyl)phenyl]-4-oxidanylidene-butanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6HJJ _cell.length_a 82.027 _cell.length_b 82.027 _cell.length_c 172.609 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HJJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H24 F4 N6 O2' _chem_comp.formula_weight 528.501 _chem_comp.id G7T _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-(4-azanyl-1-propan-2-yl-pyrazolo[3,4-d]pyrimidin-3-yl)-3-methyl-phenyl]-4-[4-fluoranyl-3-(trifluoromethyl)phenyl]-4-oxidanylidene-butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 G7T sing 89 n n C16 C15 G7T sing 90 n n F24 C22 G7T sing 91 n n N14 C15 G7T sing 92 n n N14 C13 G7T sing 93 n n N01 C02 G7T sing 94 n n C17 C18 G7T sing 95 n n O30 C18 G7T doub 96 n n C32 C13 G7T doub 97 n y C32 C33 G7T sing 98 n y C15 O31 G7T doub 99 n n C18 C19 G7T sing 100 n n C13 C12 G7T sing 101 n y C20 C19 G7T doub 102 n y C20 C21 G7T sing 103 n y C22 F25 G7T sing 104 n n C22 C21 G7T sing 105 n n C22 F23 G7T sing 106 n n C19 C29 G7T sing 107 n y C33 C09 G7T doub 108 n y C21 C26 G7T doub 109 n y C02 N03 G7T doub 110 n y C02 C07 G7T sing 111 n y N03 C04 G7T sing 112 n y C12 C10 G7T doub 113 n y C29 C28 G7T doub 114 n y C26 C28 G7T sing 115 n y C26 F27 G7T sing 116 n n C09 C10 G7T sing 117 n y C09 C08 G7T sing 118 n n C10 C11 G7T sing 119 n n C07 C08 G7T sing 120 n y C07 C06 G7T doub 121 n y C04 N05 G7T doub 122 n y C08 N34 G7T doub 123 n y N05 C06 G7T sing 124 n y C06 N35 G7T sing 125 n y N34 N35 G7T sing 126 n y N35 C36 G7T sing 127 n n C36 C37 G7T sing 128 n n C36 C38 G7T sing 129 n n C17 H171 G7T sing 130 n n C17 H1 G7T sing 131 n n C20 H201 G7T sing 132 n n C28 H281 G7T sing 133 n n N01 H011 G7T sing 134 n n N01 H012 G7T sing 135 n n C04 H041 G7T sing 136 n n C11 H112 G7T sing 137 n n C11 H111 G7T sing 138 n n C11 H113 G7T sing 139 n n C12 H121 G7T sing 140 n n N14 H141 G7T sing 141 n n C16 H161 G7T sing 142 n n C16 H2 G7T sing 143 n n C29 H291 G7T sing 144 n n C32 H321 G7T sing 145 n n C33 H331 G7T sing 146 n n C36 H361 G7T sing 147 n n C37 H373 G7T sing 148 n n C37 H371 G7T sing 149 n n C37 H372 G7T sing 150 n n C38 H381 G7T sing 151 n n C38 H383 G7T sing 152 n n C38 H382 G7T sing 153 n n # _atom_sites.entry_id 6HJJ _atom_sites.fract_transf_matrix[1][1] 0.012191 _atom_sites.fract_transf_matrix[1][2] 0.007039 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G7T A 1 501 1 G7T LIG . C 3 CL A 1 502 1 CL CL . D 3 CL A 1 503 2 CL CL . E 3 CL A 1 504 3 CL CL . F 4 ACT A 1 505 1 ACT ACT . G 4 ACT A 1 506 2 ACT ACT . H 4 ACT A 1 507 3 ACT ACT . I 5 PGF A 1 508 1 PGF PG6 . J 6 HOH A 1 601 54 HOH HOH . J 6 HOH A 2 602 95 HOH HOH . J 6 HOH A 3 603 7 HOH HOH . J 6 HOH A 4 604 1 HOH HOH . J 6 HOH A 5 605 24 HOH HOH . J 6 HOH A 6 606 4 HOH HOH . J 6 HOH A 7 607 11 HOH HOH . J 6 HOH A 8 608 8 HOH HOH . J 6 HOH A 9 609 62 HOH HOH . J 6 HOH A 10 610 89 HOH HOH . J 6 HOH A 11 611 5 HOH HOH . J 6 HOH A 12 612 3 HOH HOH . J 6 HOH A 13 613 47 HOH HOH . J 6 HOH A 14 614 29 HOH HOH . J 6 HOH A 15 615 17 HOH HOH . J 6 HOH A 16 616 69 HOH HOH . J 6 HOH A 17 617 2 HOH HOH . J 6 HOH A 18 618 71 HOH HOH . J 6 HOH A 19 619 23 HOH HOH . J 6 HOH A 20 620 53 HOH HOH . J 6 HOH A 21 621 88 HOH HOH . J 6 HOH A 22 622 81 HOH HOH . J 6 HOH A 23 623 6 HOH HOH . J 6 HOH A 24 624 12 HOH HOH . J 6 HOH A 25 625 85 HOH HOH . J 6 HOH A 26 626 19 HOH HOH . J 6 HOH A 27 627 51 HOH HOH . J 6 HOH A 28 628 27 HOH HOH . J 6 HOH A 29 629 67 HOH HOH . J 6 HOH A 30 630 70 HOH HOH . J 6 HOH A 31 631 13 HOH HOH . J 6 HOH A 32 632 25 HOH HOH . J 6 HOH A 33 633 44 HOH HOH . J 6 HOH A 34 634 43 HOH HOH . J 6 HOH A 35 635 18 HOH HOH . J 6 HOH A 36 636 22 HOH HOH . J 6 HOH A 37 637 91 HOH HOH . J 6 HOH A 38 638 72 HOH HOH . J 6 HOH A 39 639 94 HOH HOH . J 6 HOH A 40 640 90 HOH HOH . J 6 HOH A 41 641 31 HOH HOH . J 6 HOH A 42 642 30 HOH HOH . J 6 HOH A 43 643 75 HOH HOH . J 6 HOH A 44 644 57 HOH HOH . J 6 HOH A 45 645 63 HOH HOH . J 6 HOH A 46 646 26 HOH HOH . J 6 HOH A 47 647 60 HOH HOH . J 6 HOH A 48 648 28 HOH HOH . J 6 HOH A 49 649 98 HOH HOH . J 6 HOH A 50 650 45 HOH HOH . J 6 HOH A 51 651 80 HOH HOH . J 6 HOH A 52 652 93 HOH HOH . J 6 HOH A 53 653 79 HOH HOH . J 6 HOH A 54 654 65 HOH HOH . J 6 HOH A 55 655 40 HOH HOH . J 6 HOH A 56 656 48 HOH HOH . J 6 HOH A 57 657 76 HOH HOH . J 6 HOH A 58 658 61 HOH HOH . J 6 HOH A 59 659 68 HOH HOH . J 6 HOH A 60 660 66 HOH HOH . J 6 HOH A 61 661 96 HOH HOH . J 6 HOH A 62 662 73 HOH HOH . J 6 HOH A 63 663 84 HOH HOH . J 6 HOH A 64 664 64 HOH HOH . J 6 HOH A 65 665 59 HOH HOH . J 6 HOH A 66 666 92 HOH HOH . J 6 HOH A 67 667 49 HOH HOH . J 6 HOH A 68 668 56 HOH HOH . J 6 HOH A 69 669 77 HOH HOH . J 6 HOH A 70 670 83 HOH HOH . J 6 HOH A 71 671 52 HOH HOH . J 6 HOH A 72 672 33 HOH HOH . J 6 HOH A 73 673 97 HOH HOH . J 6 HOH A 74 674 78 HOH HOH . J 6 HOH A 75 675 87 HOH HOH . J 6 HOH A 76 676 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 G7T . . . B 2 7.68 -28.488 -7.491 0.79 51.42 ? C10 G7T 501 A 1 HETATM 2 C C13 G7T . . . B 2 7.927 -26.99 -9.356 0.79 56.38 ? C13 G7T 501 A 1 HETATM 3 C C15 G7T . . . B 2 9.602 -25.153 -9.538 0.79 73.26 ? C15 G7T 501 A 1 HETATM 4 C C17 G7T . . . B 2 10.825 -23.116 -9.725 0.79 71.72 ? C17 G7T 501 A 1 HETATM 5 C C20 G7T . . . B 2 13.895 -20.873 -9.152 0.79 86.89 ? C20 G7T 501 A 1 HETATM 6 C C21 G7T . . . B 2 14.221 -19.612 -8.681 0.79 85.11 ? C21 G7T 501 A 1 HETATM 7 C C22 G7T . . . B 2 15.648 -19.038 -8.973 0.79 134.83 ? C22 G7T 501 A 1 HETATM 8 C C26 G7T . . . B 2 13.301 -18.884 -7.965 0.79 85.06 ? C26 G7T 501 A 1 HETATM 9 C C28 G7T . . . B 2 12.034 -19.404 -7.708 0.79 89.25 ? C28 G7T 501 A 1 HETATM 10 N N01 G7T . . . B 2 4.16 -30.406 -9.789 0.79 36.47 ? N01 G7T 501 A 1 HETATM 11 C C02 G7T . . . B 2 3.743 -30.853 -8.467 0.79 33.91 ? C02 G7T 501 A 1 HETATM 12 N N03 G7T . . . B 2 2.749 -31.793 -8.392 0.79 37.7 ? N03 G7T 501 A 1 HETATM 13 C C04 G7T . . . B 2 2.33 -32.241 -7.186 0.79 42.05 ? C04 G7T 501 A 1 HETATM 14 N N05 G7T . . . B 2 2.862 -31.798 -6.031 0.79 49.63 ? N05 G7T 501 A 1 HETATM 15 C C06 G7T . . . B 2 3.847 -30.858 -5.993 0.79 43.57 ? C06 G7T 501 A 1 HETATM 16 C C07 G7T . . . B 2 4.337 -30.34 -7.266 0.79 41.12 ? C07 G7T 501 A 1 HETATM 17 C C08 G7T . . . B 2 5.36 -29.411 -6.867 0.79 53.04 ? C08 G7T 501 A 1 HETATM 18 C C09 G7T . . . B 2 6.273 -28.543 -7.751 0.79 55.33 ? C09 G7T 501 A 1 HETATM 19 C C11 G7T . . . B 2 8.347 -29.258 -6.352 0.79 61.23 ? C11 G7T 501 A 1 HETATM 20 C C12 G7T . . . B 2 8.485 -27.723 -8.282 0.79 54 ? C12 G7T 501 A 1 HETATM 21 N N14 G7T . . . B 2 8.81 -26.164 -10.188 0.79 69.13 ? N14 G7T 501 A 1 HETATM 22 C C16 G7T . . . B 2 10.541 -24.265 -10.329 0.79 69.77 ? C16 G7T 501 A 1 HETATM 23 C C18 G7T . . . B 2 12.296 -22.798 -9.441 0.79 78.52 ? C18 G7T 501 A 1 HETATM 24 C C19 G7T . . . B 2 12.65 -21.384 -8.901 0.79 89.28 ? C19 G7T 501 A 1 HETATM 25 F F23 G7T . . . B 2 15.895 -18.048 -8.141 0.79 138.73 ? F23 G7T 501 A 1 HETATM 26 F F24 G7T . . . B 2 15.686 -18.601 -10.222 0.79 134.25 ? F24 G7T 501 A 1 HETATM 27 F F25 G7T . . . B 2 16.53 -19.988 -8.802 0.79 131.55 ? F25 G7T 501 A 1 HETATM 28 F F27 G7T . . . B 2 13.619 -17.686 -7.52 0.79 88.44 ? F27 G7T 501 A 1 HETATM 29 C C29 G7T . . . B 2 11.705 -20.648 -8.175 0.79 88.42 ? C29 G7T 501 A 1 HETATM 30 O O30 G7T . . . B 2 13.148 -23.598 -9.628 0.79 83.98 ? O30 G7T 501 A 1 HETATM 31 O O31 G7T . . . B 2 9.535 -24.992 -8.315 0.79 78.63 ? O31 G7T 501 A 1 HETATM 32 C C32 G7T . . . B 2 6.57 -27.037 -9.604 0.79 53.32 ? C32 G7T 501 A 1 HETATM 33 C C33 G7T . . . B 2 5.738 -27.826 -8.794 0.79 58.52 ? C33 G7T 501 A 1 HETATM 34 N N34 G7T . . . B 2 5.433 -29.404 -5.491 0.79 51.64 ? N34 G7T 501 A 1 HETATM 35 N N35 G7T . . . B 2 4.541 -30.257 -4.991 0.79 52.6 ? N35 G7T 501 A 1 HETATM 36 C C36 G7T . . . B 2 4.457 -30.428 -3.536 0.79 61.75 ? C36 G7T 501 A 1 HETATM 37 C C37 G7T . . . B 2 3.948 -31.793 -3.087 0.79 66.93 ? C37 G7T 501 A 1 HETATM 38 C C38 G7T . . . B 2 3.676 -29.252 -2.977 0.79 64.57 ? C38 G7T 501 A 1 HETATM 39 H H171 G7T . . . B 2 10.115 -22.667 -9.173 0.79 86.06 ? H171 G7T 501 A 1 HETATM 40 H H201 G7T . . . B 2 14.532 -21.38 -9.65 0.79 104.27 ? H201 G7T 501 A 1 HETATM 41 H H281 G7T . . . B 2 11.383 -18.883 -7.201 0.79 107.1 ? H281 G7T 501 A 1 HETATM 42 H H011 G7T . . . B 2 3.529 -30.325 -10.481 0.79 43.76 ? H011 G7T 501 A 1 HETATM 43 H H012 G7T . . . B 2 5.056 -30.201 -9.95 0.79 43.76 ? H012 G7T 501 A 1 HETATM 44 H H041 G7T . . . B 2 1.6 -32.918 -7.152 0.79 50.46 ? H041 G7T 501 A 1 HETATM 45 H H112 G7T . . . B 2 9.247 -29.572 -6.646 0.79 73.47 ? H112 G7T 501 A 1 HETATM 46 H H111 G7T . . . B 2 7.785 -30.047 -6.105 0.79 73.47 ? H111 G7T 501 A 1 HETATM 47 H H113 G7T . . . B 2 8.447 -28.666 -5.567 0.79 73.47 ? H113 G7T 501 A 1 HETATM 48 H H121 G7T . . . B 2 9.465 -27.68 -8.103 0.79 64.8 ? H121 G7T 501 A 1 HETATM 49 H H141 G7T . . . B 2 8.859 -26.291 -11.113 0.79 82.96 ? H141 G7T 501 A 1 HETATM 50 H H161 G7T . . . B 2 11.234 -24.687 -10.863 0.79 83.73 ? H161 G7T 501 A 1 HETATM 51 H H291 G7T . . . B 2 10.82 -21.02 -8 0.79 106.1 ? H291 G7T 501 A 1 HETATM 52 H H321 G7T . . . B 2 6.198 -26.54 -10.329 0.79 63.98 ? H321 G7T 501 A 1 HETATM 53 H H331 G7T . . . B 2 4.813 -27.865 -8.965 0.79 70.23 ? H331 G7T 501 A 1 HETATM 54 H H361 G7T . . . B 2 5.369 -30.335 -3.189 0.79 74.1 ? H361 G7T 501 A 1 HETATM 55 H H373 G7T . . . B 2 3.263 -32.127 -3.745 0.79 80.31 ? H373 G7T 501 A 1 HETATM 56 H H371 G7T . . . B 2 3.529 -31.709 -2.179 0.79 80.31 ? H371 G7T 501 A 1 HETATM 57 H H372 G7T . . . B 2 4.684 -32.414 -3.045 0.79 80.31 ? H372 G7T 501 A 1 HETATM 58 H H381 G7T . . . B 2 2.752 -29.358 -3.18 0.79 77.49 ? H381 G7T 501 A 1 HETATM 59 H H383 G7T . . . B 2 4.006 -28.419 -3.379 0.79 77.49 ? H383 G7T 501 A 1 HETATM 60 H H382 G7T . . . B 2 3.797 -29.215 -1.994 0.79 77.49 ? H382 G7T 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 60 #