data_6HK7 # _model_server_result.job_id ltWyXEBg1KmERxx6D37-5Q _model_server_result.datetime_utc '2024-11-19 14:51:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hk7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6HK7 # _exptl.entry_id 6HK7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 434.513 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-~{N}-(2-methoxyethyl)-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HK7 _cell.length_a 85.979 _cell.length_b 103.727 _cell.length_c 108.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 180 A SER 215 1_555 A N PTR 181 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 A C PTR 181 A PTR 216 1_555 A N ILE 182 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C19 H26 N6 O4 S' _chem_comp.formula_weight 434.513 _chem_comp.id G8N _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-~{N}-(2-methoxyethyl)-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 G8N sing 92 n n N1 C3 G8N sing 93 n n N1 C2 G8N sing 94 n n C3 C4 G8N sing 95 n n C2 C18 G8N sing 96 n n C4 N2 G8N sing 97 n n C18 N2 G8N sing 98 n n N2 S1 G8N sing 99 n n S1 O2 G8N doub 100 n n S1 C5 G8N sing 101 n n S1 O1 G8N doub 102 n n C10 C5 G8N doub 103 n y C10 C9 G8N sing 104 n y C5 C6 G8N sing 105 n y C9 C8 G8N doub 106 n y C6 C7 G8N doub 107 n y C8 C7 G8N sing 108 n y C8 C11 G8N sing 109 n n C11 N4 G8N doub 110 n y C11 C12 G8N sing 111 n y N4 C14 G8N sing 112 n y C12 N3 G8N doub 113 n y N5 C16 G8N sing 114 n n N5 C15 G8N sing 115 n n C16 C17 G8N sing 116 n n C14 C15 G8N sing 117 n n C14 C13 G8N doub 118 n y N3 C13 G8N sing 119 n y C15 O3 G8N doub 120 n n C13 N6 G8N sing 121 n n C19 O4 G8N sing 122 n n C17 O4 G8N sing 123 n n C2 H2 G8N sing 124 n n C2 H3 G8N sing 125 n n C4 H4 G8N sing 126 n n C4 H5 G8N sing 127 n n N5 H6 G8N sing 128 n n C6 H7 G8N sing 129 n n C10 H8 G8N sing 130 n n C12 H9 G8N sing 131 n n C16 H10 G8N sing 132 n n C16 H11 G8N sing 133 n n C17 H12 G8N sing 134 n n C17 H13 G8N sing 135 n n C18 H14 G8N sing 136 n n C18 H15 G8N sing 137 n n C19 H16 G8N sing 138 n n C19 H17 G8N sing 139 n n C19 H18 G8N sing 140 n n C1 H19 G8N sing 141 n n C1 H20 G8N sing 142 n n C1 H21 G8N sing 143 n n C3 H22 G8N sing 144 n n C3 H23 G8N sing 145 n n C7 H24 G8N sing 146 n n C9 H25 G8N sing 147 n n N6 H26 G8N sing 148 n n N6 H27 G8N sing 149 n n # _atom_sites.entry_id 6HK7 _atom_sites.fract_transf_matrix[1][1] 0.011631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 5 GOL GOL . C 3 DMS A 1 402 7 DMS DMS . D 4 G8N A 1 403 2 G8N C50 . E 5 HOH A 1 501 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 G8N . . . D 4 -14.881 -17.103 -63.734 1 32.13 ? N1 G8N 403 A 1 HETATM 2 C C2 G8N . . . D 4 -15.518 -17.865 -62.831 1 31.2 ? C2 G8N 403 A 1 HETATM 3 N N3 G8N . . . D 4 -9.117 -20.055 -56.181 1 24.82 ? N3 G8N 403 A 1 HETATM 4 C C4 G8N . . . D 4 -14.704 -15.519 -61.794 1 26.02 ? C4 G8N 403 A 1 HETATM 5 N N5 G8N . . . D 4 -7.236 -15.575 -56.547 1 25.37 ? N5 G8N 403 A 1 HETATM 6 C C6 G8N . . . D 4 -13.843 -17.546 -57.828 1 33.08 ? C6 G8N 403 A 1 HETATM 7 C C10 G8N . . . D 4 -12.487 -16.064 -59.213 1 29.85 ? C10 G8N 403 A 1 HETATM 8 C C11 G8N . . . D 4 -10.193 -18.135 -56.983 1 28.93 ? C11 G8N 403 A 1 HETATM 9 C C12 G8N . . . D 4 -10.205 -19.495 -56.695 1 27.19 ? C12 G8N 403 A 1 HETATM 10 C C14 G8N . . . D 4 -8.007 -17.988 -56.258 1 25.51 ? C14 G8N 403 A 1 HETATM 11 C C15 G8N . . . D 4 -6.844 -17.005 -56.108 1 23.74 ? C15 G8N 403 A 1 HETATM 12 C C16 G8N . . . D 4 -6.321 -14.408 -56.507 1 23.96 ? C16 G8N 403 A 1 HETATM 13 C C17 G8N . . . D 4 -5.596 -14.434 -55.097 1 21.59 ? C17 G8N 403 A 1 HETATM 14 C C18 G8N . . . D 4 -15.006 -17.641 -61.395 1 29.46 ? C18 G8N 403 A 1 HETATM 15 C C19 G8N . . . D 4 -4.405 -12.552 -55.727 1 20.67 ? C19 G8N 403 A 1 HETATM 16 C C1 G8N . . . D 4 -15.304 -17.255 -64.984 1 33.37 ? C1 G8N 403 A 1 HETATM 17 C C3 G8N . . . D 4 -14.733 -15.816 -63.321 1 28.37 ? C3 G8N 403 A 1 HETATM 18 N N2 G8N . . . D 4 -15.312 -16.401 -60.981 1 28.2 ? N2 G8N 403 A 1 HETATM 19 S S1 G8N . . . D 4 -15.254 -16.074 -59.474 1 27.69 ? S1 G8N 403 A 1 HETATM 20 O O1 G8N . . . D 4 -16.444 -16.797 -58.469 1 35.96 ? O1 G8N 403 A 1 HETATM 21 O O2 G8N . . . D 4 -15.463 -14.457 -59.326 1 42.14 ? O2 G8N 403 A 1 HETATM 22 C C5 G8N . . . D 4 -13.697 -16.56 -58.79 1 28.16 ? C5 G8N 403 A 1 HETATM 23 C C7 G8N . . . D 4 -12.685 -18.049 -57.246 1 39.83 ? C7 G8N 403 A 1 HETATM 24 C C8 G8N . . . D 4 -11.449 -17.546 -57.606 1 33.46 ? C8 G8N 403 A 1 HETATM 25 C C9 G8N . . . D 4 -11.312 -16.564 -58.621 1 35.93 ? C9 G8N 403 A 1 HETATM 26 C C13 G8N . . . D 4 -7.99 -19.378 -55.958 1 23.32 ? C13 G8N 403 A 1 HETATM 27 N N4 G8N . . . D 4 -9.117 -17.409 -56.779 1 27.5 ? N4 G8N 403 A 1 HETATM 28 O O3 G8N . . . D 4 -5.744 -17.378 -55.734 1 26.14 ? O3 G8N 403 A 1 HETATM 29 N N6 G8N . . . D 4 -6.867 -20.188 -55.439 1 28.94 ? N6 G8N 403 A 1 HETATM 30 O O4 G8N . . . D 4 -5.067 -13.206 -54.664 1 20.56 ? O4 G8N 403 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #