data_6HKS # _model_server_result.job_id RVabC7DrbtjJuRoLVooGlA _model_server_result.datetime_utc '2024-11-04 22:39:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hks # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":601}' # _entry.id 6HKS # _exptl.entry_id 6HKS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.14 _cell.angle_gamma 90 _cell.entry_id 6HKS _cell.length_a 46.62 _cell.length_b 77.43 _cell.length_c 130.03 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HKS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M,S,Y 1 1 B,H,N,T,Z 2 1 C,I,O,U,AA 3 1 D,J,V,BA 4 1 E,K,P,W,CA 5 1 F,L,Q,R,X,DA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6HKS _atom_sites.fract_transf_matrix[1][1] 0.02145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000052 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IOD A 1 601 5 IOD I . N 3 IOD B 1 601 3 IOD I . O 3 IOD C 1 601 6 IOD I . P 3 IOD E 1 601 2 IOD I . Q 3 IOD F 1 601 1 IOD I . R 3 IOD F 1 602 4 IOD I . S 4 HOH A 1 701 93 HOH HOH . S 4 HOH A 2 702 5 HOH HOH . S 4 HOH A 3 703 21 HOH HOH . S 4 HOH A 4 704 14 HOH HOH . S 4 HOH A 5 705 6 HOH HOH . S 4 HOH A 6 706 17 HOH HOH . S 4 HOH A 7 707 43 HOH HOH . S 4 HOH A 8 708 27 HOH HOH . S 4 HOH A 9 709 67 HOH HOH . S 4 HOH A 10 710 212 HOH HOH . S 4 HOH A 11 711 174 HOH HOH . S 4 HOH A 12 712 188 HOH HOH . S 4 HOH A 13 713 9 HOH HOH . S 4 HOH A 14 714 160 HOH HOH . S 4 HOH A 15 715 76 HOH HOH . S 4 HOH A 16 716 148 HOH HOH . S 4 HOH A 17 717 207 HOH HOH . S 4 HOH A 18 718 115 HOH HOH . S 4 HOH A 19 719 142 HOH HOH . S 4 HOH A 20 720 94 HOH HOH . S 4 HOH A 21 721 179 HOH HOH . S 4 HOH A 22 722 56 HOH HOH . S 4 HOH A 23 723 84 HOH HOH . S 4 HOH A 24 724 184 HOH HOH . S 4 HOH A 25 725 166 HOH HOH . S 4 HOH A 26 726 185 HOH HOH . S 4 HOH A 27 727 144 HOH HOH . S 4 HOH A 28 728 222 HOH HOH . S 4 HOH A 29 729 170 HOH HOH . S 4 HOH A 30 730 178 HOH HOH . S 4 HOH A 31 731 149 HOH HOH . S 4 HOH A 32 732 57 HOH HOH . S 4 HOH A 33 733 214 HOH HOH . S 4 HOH A 34 734 29 HOH HOH . S 4 HOH A 35 735 90 HOH HOH . S 4 HOH A 36 736 228 HOH HOH . S 4 HOH A 37 737 180 HOH HOH . S 4 HOH A 38 738 171 HOH HOH . S 4 HOH A 39 739 71 HOH HOH . S 4 HOH A 40 740 215 HOH HOH . T 4 HOH B 1 701 52 HOH HOH . T 4 HOH B 2 702 224 HOH HOH . T 4 HOH B 3 703 213 HOH HOH . T 4 HOH B 4 704 59 HOH HOH . T 4 HOH B 5 705 26 HOH HOH . T 4 HOH B 6 706 95 HOH HOH . T 4 HOH B 7 707 226 HOH HOH . T 4 HOH B 8 708 42 HOH HOH . T 4 HOH B 9 709 55 HOH HOH . T 4 HOH B 10 710 50 HOH HOH . T 4 HOH B 11 711 168 HOH HOH . T 4 HOH B 12 712 181 HOH HOH . T 4 HOH B 13 713 132 HOH HOH . T 4 HOH B 14 714 201 HOH HOH . T 4 HOH B 15 715 77 HOH HOH . T 4 HOH B 16 716 151 HOH HOH . T 4 HOH B 17 717 64 HOH HOH . T 4 HOH B 18 718 211 HOH HOH . T 4 HOH B 19 719 47 HOH HOH . T 4 HOH B 20 720 138 HOH HOH . T 4 HOH B 21 721 137 HOH HOH . T 4 HOH B 22 722 104 HOH HOH . T 4 HOH B 23 723 154 HOH HOH . T 4 HOH B 24 724 108 HOH HOH . T 4 HOH B 25 725 85 HOH HOH . T 4 HOH B 26 726 54 HOH HOH . T 4 HOH B 27 727 147 HOH HOH . T 4 HOH B 28 728 25 HOH HOH . T 4 HOH B 29 729 146 HOH HOH . T 4 HOH B 30 730 7 HOH HOH . T 4 HOH B 31 731 112 HOH HOH . T 4 HOH B 32 732 72 HOH HOH . T 4 HOH B 33 733 162 HOH HOH . T 4 HOH B 34 734 126 HOH HOH . U 4 HOH C 1 701 102 HOH HOH . U 4 HOH C 2 702 125 HOH HOH . U 4 HOH C 3 703 12 HOH HOH . U 4 HOH C 4 704 36 HOH HOH . U 4 HOH C 5 705 15 HOH HOH . U 4 HOH C 6 706 41 HOH HOH . U 4 HOH C 7 707 165 HOH HOH . U 4 HOH C 8 708 68 HOH HOH . U 4 HOH C 9 709 223 HOH HOH . U 4 HOH C 10 710 118 HOH HOH . U 4 HOH C 11 711 63 HOH HOH . U 4 HOH C 12 712 13 HOH HOH . U 4 HOH C 13 713 78 HOH HOH . U 4 HOH C 14 714 28 HOH HOH . U 4 HOH C 15 715 143 HOH HOH . U 4 HOH C 16 716 114 HOH HOH . U 4 HOH C 17 717 86 HOH HOH . U 4 HOH C 18 718 140 HOH HOH . U 4 HOH C 19 719 109 HOH HOH . U 4 HOH C 20 720 18 HOH HOH . U 4 HOH C 21 721 139 HOH HOH . U 4 HOH C 22 722 183 HOH HOH . U 4 HOH C 23 723 51 HOH HOH . U 4 HOH C 24 724 113 HOH HOH . U 4 HOH C 25 725 119 HOH HOH . U 4 HOH C 26 726 61 HOH HOH . U 4 HOH C 27 727 208 HOH HOH . U 4 HOH C 28 728 232 HOH HOH . U 4 HOH C 29 729 131 HOH HOH . U 4 HOH C 30 730 219 HOH HOH . U 4 HOH C 31 731 124 HOH HOH . U 4 HOH C 32 732 175 HOH HOH . U 4 HOH C 33 733 197 HOH HOH . U 4 HOH C 34 734 79 HOH HOH . U 4 HOH C 35 735 221 HOH HOH . V 4 HOH D 1 601 231 HOH HOH . V 4 HOH D 2 602 20 HOH HOH . V 4 HOH D 3 603 1 HOH HOH . V 4 HOH D 4 604 16 HOH HOH . V 4 HOH D 5 605 205 HOH HOH . V 4 HOH D 6 606 116 HOH HOH . V 4 HOH D 7 607 45 HOH HOH . V 4 HOH D 8 608 203 HOH HOH . V 4 HOH D 9 609 189 HOH HOH . V 4 HOH D 10 610 135 HOH HOH . V 4 HOH D 11 611 128 HOH HOH . V 4 HOH D 12 612 169 HOH HOH . V 4 HOH D 13 613 159 HOH HOH . V 4 HOH D 14 614 89 HOH HOH . V 4 HOH D 15 615 196 HOH HOH . V 4 HOH D 16 616 152 HOH HOH . V 4 HOH D 17 617 155 HOH HOH . V 4 HOH D 18 618 100 HOH HOH . V 4 HOH D 19 619 99 HOH HOH . V 4 HOH D 20 620 44 HOH HOH . V 4 HOH D 21 621 33 HOH HOH . V 4 HOH D 22 622 123 HOH HOH . V 4 HOH D 23 623 83 HOH HOH . V 4 HOH D 24 624 187 HOH HOH . V 4 HOH D 25 625 202 HOH HOH . V 4 HOH D 26 626 172 HOH HOH . V 4 HOH D 27 627 167 HOH HOH . V 4 HOH D 28 628 101 HOH HOH . W 4 HOH E 1 701 24 HOH HOH . W 4 HOH E 2 702 34 HOH HOH . W 4 HOH E 3 703 32 HOH HOH . W 4 HOH E 4 704 194 HOH HOH . W 4 HOH E 5 705 220 HOH HOH . W 4 HOH E 6 706 60 HOH HOH . W 4 HOH E 7 707 35 HOH HOH . W 4 HOH E 8 708 39 HOH HOH . W 4 HOH E 9 709 48 HOH HOH . W 4 HOH E 10 710 233 HOH HOH . W 4 HOH E 11 711 53 HOH HOH . W 4 HOH E 12 712 133 HOH HOH . W 4 HOH E 13 713 193 HOH HOH . W 4 HOH E 14 714 145 HOH HOH . W 4 HOH E 15 715 4 HOH HOH . W 4 HOH E 16 716 158 HOH HOH . W 4 HOH E 17 717 153 HOH HOH . W 4 HOH E 18 718 110 HOH HOH . W 4 HOH E 19 719 69 HOH HOH . W 4 HOH E 20 720 164 HOH HOH . W 4 HOH E 21 721 141 HOH HOH . W 4 HOH E 22 722 173 HOH HOH . W 4 HOH E 23 723 156 HOH HOH . W 4 HOH E 24 724 204 HOH HOH . W 4 HOH E 25 725 176 HOH HOH . W 4 HOH E 26 726 218 HOH HOH . W 4 HOH E 27 727 127 HOH HOH . W 4 HOH E 28 728 120 HOH HOH . W 4 HOH E 29 729 161 HOH HOH . W 4 HOH E 30 730 136 HOH HOH . X 4 HOH F 1 701 191 HOH HOH . X 4 HOH F 2 702 130 HOH HOH . X 4 HOH F 3 703 98 HOH HOH . X 4 HOH F 4 704 62 HOH HOH . X 4 HOH F 5 705 230 HOH HOH . X 4 HOH F 6 706 192 HOH HOH . X 4 HOH F 7 707 97 HOH HOH . X 4 HOH F 8 708 177 HOH HOH . X 4 HOH F 9 709 199 HOH HOH . X 4 HOH F 10 710 22 HOH HOH . X 4 HOH F 11 711 74 HOH HOH . X 4 HOH F 12 712 46 HOH HOH . X 4 HOH F 13 713 225 HOH HOH . X 4 HOH F 14 714 134 HOH HOH . X 4 HOH F 15 715 40 HOH HOH . X 4 HOH F 16 716 200 HOH HOH . X 4 HOH F 17 717 38 HOH HOH . X 4 HOH F 18 718 157 HOH HOH . X 4 HOH F 19 719 11 HOH HOH . X 4 HOH F 20 720 88 HOH HOH . X 4 HOH F 21 721 163 HOH HOH . X 4 HOH F 22 722 217 HOH HOH . X 4 HOH F 23 723 150 HOH HOH . X 4 HOH F 24 724 31 HOH HOH . X 4 HOH F 25 725 107 HOH HOH . X 4 HOH F 26 726 117 HOH HOH . X 4 HOH F 27 727 195 HOH HOH . X 4 HOH F 28 728 49 HOH HOH . X 4 HOH F 29 729 216 HOH HOH . X 4 HOH F 30 730 91 HOH HOH . X 4 HOH F 31 731 82 HOH HOH . X 4 HOH F 32 732 80 HOH HOH . X 4 HOH F 33 733 198 HOH HOH . X 4 HOH F 34 734 70 HOH HOH . X 4 HOH F 35 735 209 HOH HOH . X 4 HOH F 36 736 106 HOH HOH . X 4 HOH F 37 737 210 HOH HOH . X 4 HOH F 38 738 227 HOH HOH . X 4 HOH F 39 739 229 HOH HOH . X 4 HOH F 40 740 206 HOH HOH . X 4 HOH F 41 741 129 HOH HOH . Y 4 HOH G 1 101 8 HOH HOH . Y 4 HOH G 2 102 190 HOH HOH . Y 4 HOH G 3 103 37 HOH HOH . Y 4 HOH G 4 104 111 HOH HOH . Y 4 HOH G 5 105 182 HOH HOH . Z 4 HOH H 1 101 58 HOH HOH . Z 4 HOH H 2 102 96 HOH HOH . Z 4 HOH H 3 103 3 HOH HOH . AA 4 HOH I 1 101 121 HOH HOH . AA 4 HOH I 2 102 73 HOH HOH . AA 4 HOH I 3 103 105 HOH HOH . BA 4 HOH J 1 101 30 HOH HOH . CA 4 HOH K 1 101 19 HOH HOH . CA 4 HOH K 2 102 23 HOH HOH . CA 4 HOH K 3 103 81 HOH HOH . CA 4 HOH K 4 104 103 HOH HOH . CA 4 HOH K 5 105 75 HOH HOH . CA 4 HOH K 6 106 122 HOH HOH . CA 4 HOH K 7 107 87 HOH HOH . CA 4 HOH K 8 108 65 HOH HOH . DA 4 HOH L 1 101 10 HOH HOH . DA 4 HOH L 2 102 186 HOH HOH . DA 4 HOH L 3 103 2 HOH HOH . DA 4 HOH L 4 104 66 HOH HOH . DA 4 HOH L 5 105 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 I I IOD . A . N 3 6.381 36.07 13.872 0.46 42.72 ? I IOD 601 B 1 HETATM 2 I I IOD . B . N 3 6.531 37.098 13.341 0.55 52.17 ? I IOD 601 B 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #