data_6HL1 # _model_server_result.job_id o09YVHEH5RTkzjC8cqUdbQ _model_server_result.datetime_utc '2024-11-25 19:55:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hl1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6HL1 # _exptl.entry_id 6HL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.572 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHENODEOXYCHOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.47 _cell.angle_gamma 90 _cell.entry_id 6HL1 _cell.length_a 84.444 _cell.length_b 33.815 _cell.length_c 83.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H40 O4' _chem_comp.formula_weight 392.572 _chem_comp.id JN3 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHENODEOXYCHOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(3ALPHA,5ALPHA,7BETA,8ALPHA,17ALPHA)-3,7-DIHYDROXYCHOLAN-24-OIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 JN3 sing 173 n n C1 C10 JN3 sing 174 n n C1 H11 JN3 sing 175 n n C1 H12 JN3 sing 176 n n C2 C3 JN3 sing 177 n n C2 H21 JN3 sing 178 n n C2 H22 JN3 sing 179 n n C3 O3 JN3 sing 180 n n C3 C4 JN3 sing 181 n n C3 H3 JN3 sing 182 n n O3 HO3 JN3 sing 183 n n C4 C5 JN3 sing 184 n n C4 H41 JN3 sing 185 n n C4 H42 JN3 sing 186 n n C5 C10 JN3 sing 187 n n C5 C6 JN3 sing 188 n n C5 H5 JN3 sing 189 n n C6 C7 JN3 sing 190 n n C6 H61 JN3 sing 191 n n C6 H62 JN3 sing 192 n n C7 C8 JN3 sing 193 n n C7 O7 JN3 sing 194 n n C7 H7 JN3 sing 195 n n O7 HO7 JN3 sing 196 n n C8 C9 JN3 sing 197 n n C8 C14 JN3 sing 198 n n C8 H8 JN3 sing 199 n n C9 C11 JN3 sing 200 n n C9 C10 JN3 sing 201 n n C9 H9 JN3 sing 202 n n C10 C19 JN3 sing 203 n n C11 C12 JN3 sing 204 n n C11 H111 JN3 sing 205 n n C11 H112 JN3 sing 206 n n C12 C13 JN3 sing 207 n n C12 H121 JN3 sing 208 n n C12 H122 JN3 sing 209 n n C13 C18 JN3 sing 210 n n C13 C17 JN3 sing 211 n n C13 C14 JN3 sing 212 n n C14 C15 JN3 sing 213 n n C14 H14 JN3 sing 214 n n C15 C16 JN3 sing 215 n n C15 H151 JN3 sing 216 n n C15 H152 JN3 sing 217 n n C16 C17 JN3 sing 218 n n C16 H161 JN3 sing 219 n n C16 H162 JN3 sing 220 n n C17 C20 JN3 sing 221 n n C17 H17 JN3 sing 222 n n C18 H181 JN3 sing 223 n n C18 H182 JN3 sing 224 n n C18 H183 JN3 sing 225 n n C19 H191 JN3 sing 226 n n C19 H192 JN3 sing 227 n n C19 H193 JN3 sing 228 n n C20 C21 JN3 sing 229 n n C20 C22 JN3 sing 230 n n C20 H20 JN3 sing 231 n n C21 H211 JN3 sing 232 n n C21 H212 JN3 sing 233 n n C21 H213 JN3 sing 234 n n C22 C23 JN3 sing 235 n n C22 H221 JN3 sing 236 n n C22 H222 JN3 sing 237 n n C23 C24 JN3 sing 238 n n C23 H231 JN3 sing 239 n n C23 H232 JN3 sing 240 n n O25 C24 JN3 doub 241 n n C24 O26 JN3 sing 242 n n O26 HO26 JN3 sing 243 n n # _atom_sites.entry_id 6HL1 _atom_sites.fract_transf_matrix[1][1] 0.011842 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002403 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029573 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 JN3 A 1 501 501 JN3 JN3 . D 4 HOH A 1 601 136 HOH HOH . D 4 HOH A 2 602 148 HOH HOH . D 4 HOH A 3 603 124 HOH HOH . D 4 HOH A 4 604 83 HOH HOH . D 4 HOH A 5 605 173 HOH HOH . D 4 HOH A 6 606 181 HOH HOH . D 4 HOH A 7 607 99 HOH HOH . D 4 HOH A 8 608 51 HOH HOH . D 4 HOH A 9 609 183 HOH HOH . D 4 HOH A 10 610 40 HOH HOH . D 4 HOH A 11 611 150 HOH HOH . D 4 HOH A 12 612 53 HOH HOH . D 4 HOH A 13 613 17 HOH HOH . D 4 HOH A 14 614 149 HOH HOH . D 4 HOH A 15 615 58 HOH HOH . D 4 HOH A 16 616 86 HOH HOH . D 4 HOH A 17 617 46 HOH HOH . D 4 HOH A 18 618 65 HOH HOH . D 4 HOH A 19 619 78 HOH HOH . D 4 HOH A 20 620 97 HOH HOH . D 4 HOH A 21 621 25 HOH HOH . D 4 HOH A 22 622 89 HOH HOH . D 4 HOH A 23 623 43 HOH HOH . D 4 HOH A 24 624 60 HOH HOH . D 4 HOH A 25 625 80 HOH HOH . D 4 HOH A 26 626 171 HOH HOH . D 4 HOH A 27 627 57 HOH HOH . D 4 HOH A 28 628 63 HOH HOH . D 4 HOH A 29 629 134 HOH HOH . D 4 HOH A 30 630 115 HOH HOH . D 4 HOH A 31 631 96 HOH HOH . D 4 HOH A 32 632 75 HOH HOH . D 4 HOH A 33 633 45 HOH HOH . D 4 HOH A 34 634 165 HOH HOH . D 4 HOH A 35 635 33 HOH HOH . D 4 HOH A 36 636 126 HOH HOH . D 4 HOH A 37 637 158 HOH HOH . D 4 HOH A 38 638 23 HOH HOH . D 4 HOH A 39 639 27 HOH HOH . D 4 HOH A 40 640 120 HOH HOH . D 4 HOH A 41 641 16 HOH HOH . D 4 HOH A 42 642 38 HOH HOH . D 4 HOH A 43 643 28 HOH HOH . D 4 HOH A 44 644 31 HOH HOH . D 4 HOH A 45 645 30 HOH HOH . D 4 HOH A 46 646 145 HOH HOH . D 4 HOH A 47 647 3 HOH HOH . D 4 HOH A 48 648 49 HOH HOH . D 4 HOH A 49 649 179 HOH HOH . D 4 HOH A 50 650 6 HOH HOH . D 4 HOH A 51 651 116 HOH HOH . D 4 HOH A 52 652 108 HOH HOH . D 4 HOH A 53 653 119 HOH HOH . D 4 HOH A 54 654 36 HOH HOH . D 4 HOH A 55 655 114 HOH HOH . D 4 HOH A 56 656 29 HOH HOH . D 4 HOH A 57 657 101 HOH HOH . D 4 HOH A 58 658 127 HOH HOH . D 4 HOH A 59 659 144 HOH HOH . D 4 HOH A 60 660 5 HOH HOH . D 4 HOH A 61 661 160 HOH HOH . D 4 HOH A 62 662 19 HOH HOH . D 4 HOH A 63 663 68 HOH HOH . D 4 HOH A 64 664 133 HOH HOH . D 4 HOH A 65 665 42 HOH HOH . D 4 HOH A 66 666 91 HOH HOH . D 4 HOH A 67 667 14 HOH HOH . D 4 HOH A 68 668 69 HOH HOH . D 4 HOH A 69 669 50 HOH HOH . D 4 HOH A 70 670 182 HOH HOH . D 4 HOH A 71 671 55 HOH HOH . D 4 HOH A 72 672 34 HOH HOH . D 4 HOH A 73 673 11 HOH HOH . D 4 HOH A 74 674 157 HOH HOH . D 4 HOH A 75 675 37 HOH HOH . D 4 HOH A 76 676 121 HOH HOH . D 4 HOH A 77 677 70 HOH HOH . D 4 HOH A 78 678 47 HOH HOH . D 4 HOH A 79 679 21 HOH HOH . D 4 HOH A 80 680 12 HOH HOH . D 4 HOH A 81 681 52 HOH HOH . D 4 HOH A 82 682 143 HOH HOH . D 4 HOH A 83 683 2 HOH HOH . D 4 HOH A 84 684 113 HOH HOH . D 4 HOH A 85 685 15 HOH HOH . D 4 HOH A 86 686 18 HOH HOH . D 4 HOH A 87 687 109 HOH HOH . D 4 HOH A 88 688 26 HOH HOH . D 4 HOH A 89 689 81 HOH HOH . D 4 HOH A 90 690 79 HOH HOH . D 4 HOH A 91 691 24 HOH HOH . D 4 HOH A 92 692 8 HOH HOH . D 4 HOH A 93 693 1 HOH HOH . D 4 HOH A 94 694 7 HOH HOH . D 4 HOH A 95 695 56 HOH HOH . D 4 HOH A 96 696 44 HOH HOH . D 4 HOH A 97 697 22 HOH HOH . D 4 HOH A 98 698 123 HOH HOH . D 4 HOH A 99 699 9 HOH HOH . D 4 HOH A 100 700 87 HOH HOH . D 4 HOH A 101 701 82 HOH HOH . D 4 HOH A 102 702 32 HOH HOH . D 4 HOH A 103 703 4 HOH HOH . D 4 HOH A 104 704 170 HOH HOH . D 4 HOH A 105 705 139 HOH HOH . D 4 HOH A 106 706 129 HOH HOH . D 4 HOH A 107 707 73 HOH HOH . D 4 HOH A 108 708 152 HOH HOH . D 4 HOH A 109 709 67 HOH HOH . D 4 HOH A 110 710 10 HOH HOH . D 4 HOH A 111 711 154 HOH HOH . D 4 HOH A 112 712 62 HOH HOH . D 4 HOH A 113 713 41 HOH HOH . D 4 HOH A 114 714 72 HOH HOH . D 4 HOH A 115 715 130 HOH HOH . D 4 HOH A 116 716 163 HOH HOH . D 4 HOH A 117 717 88 HOH HOH . D 4 HOH A 118 718 107 HOH HOH . D 4 HOH A 119 719 161 HOH HOH . D 4 HOH A 120 720 131 HOH HOH . D 4 HOH A 121 721 98 HOH HOH . D 4 HOH A 122 722 104 HOH HOH . D 4 HOH A 123 723 146 HOH HOH . D 4 HOH A 124 724 74 HOH HOH . D 4 HOH A 125 725 13 HOH HOH . D 4 HOH A 126 726 176 HOH HOH . D 4 HOH A 127 727 85 HOH HOH . D 4 HOH A 128 728 35 HOH HOH . D 4 HOH A 129 729 20 HOH HOH . D 4 HOH A 130 730 77 HOH HOH . D 4 HOH A 131 731 112 HOH HOH . D 4 HOH A 132 732 125 HOH HOH . D 4 HOH A 133 733 137 HOH HOH . D 4 HOH A 134 734 76 HOH HOH . D 4 HOH A 135 735 168 HOH HOH . D 4 HOH A 136 736 122 HOH HOH . D 4 HOH A 137 737 166 HOH HOH . D 4 HOH A 138 738 117 HOH HOH . D 4 HOH A 139 739 111 HOH HOH . D 4 HOH A 140 740 174 HOH HOH . D 4 HOH A 141 741 103 HOH HOH . D 4 HOH A 142 742 175 HOH HOH . D 4 HOH A 143 743 64 HOH HOH . D 4 HOH A 144 744 54 HOH HOH . D 4 HOH A 145 745 155 HOH HOH . D 4 HOH A 146 746 141 HOH HOH . D 4 HOH A 147 748 66 HOH HOH . D 4 HOH A 148 749 93 HOH HOH . D 4 HOH A 149 750 167 HOH HOH . D 4 HOH A 150 751 135 HOH HOH . D 4 HOH A 151 752 48 HOH HOH . D 4 HOH A 152 753 178 HOH HOH . D 4 HOH A 153 754 156 HOH HOH . D 4 HOH A 154 755 180 HOH HOH . D 4 HOH A 155 756 164 HOH HOH . D 4 HOH A 156 757 71 HOH HOH . D 4 HOH A 157 758 95 HOH HOH . D 4 HOH A 158 759 138 HOH HOH . D 4 HOH A 159 760 59 HOH HOH . D 4 HOH A 160 761 153 HOH HOH . D 4 HOH A 161 762 61 HOH HOH . D 4 HOH A 162 763 132 HOH HOH . D 4 HOH A 163 764 102 HOH HOH . D 4 HOH A 164 765 94 HOH HOH . D 4 HOH A 165 766 118 HOH HOH . D 4 HOH A 166 767 110 HOH HOH . D 4 HOH A 167 768 105 HOH HOH . D 4 HOH A 168 769 142 HOH HOH . D 4 HOH A 169 770 140 HOH HOH . D 4 HOH A 170 771 128 HOH HOH . D 4 HOH A 171 772 162 HOH HOH . D 4 HOH A 172 773 151 HOH HOH . D 4 HOH A 173 774 169 HOH HOH . D 4 HOH A 174 775 39 HOH HOH . D 4 HOH A 175 776 172 HOH HOH . D 4 HOH A 176 777 106 HOH HOH . D 4 HOH A 177 778 159 HOH HOH . D 4 HOH A 178 779 177 HOH HOH . D 4 HOH A 179 780 147 HOH HOH . E 4 HOH B 1 801 100 HOH HOH . E 4 HOH B 2 802 90 HOH HOH . E 4 HOH B 3 803 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JN3 . . . C 3 12.025 -9.879 10.908 1 26.85 ? C1 JN3 501 A 1 HETATM 2 C C2 JN3 . . . C 3 11.437 -9.173 12.152 1 25.05 ? C2 JN3 501 A 1 HETATM 3 C C3 JN3 . . . C 3 12.608 -8.701 13.006 1 28.37 ? C3 JN3 501 A 1 HETATM 4 O O3 JN3 . . . C 3 12.148 -7.885 14.117 1 29.2 ? O3 JN3 501 A 1 HETATM 5 C C4 JN3 . . . C 3 13.375 -9.925 13.512 1 24.37 ? C4 JN3 501 A 1 HETATM 6 C C5 JN3 . . . C 3 13.966 -10.696 12.308 1 25.81 ? C5 JN3 501 A 1 HETATM 7 C C6 JN3 . . . C 3 14.819 -11.924 12.725 1 26.08 ? C6 JN3 501 A 1 HETATM 8 C C7 JN3 . . . C 3 14 -13.104 13.242 1 28.88 ? C7 JN3 501 A 1 HETATM 9 O O7 JN3 . . . C 3 13.468 -12.775 14.549 1 27.33 ? O7 JN3 501 A 1 HETATM 10 C C8 JN3 . . . C 3 12.861 -13.448 12.247 1 26.29 ? C8 JN3 501 A 1 HETATM 11 C C9 JN3 . . . C 3 11.982 -12.215 11.964 1 25.16 ? C9 JN3 501 A 1 HETATM 12 C C10 JN3 . . . C 3 12.853 -11.112 11.318 1 24.89 ? C10 JN3 501 A 1 HETATM 13 C C11 JN3 . . . C 3 10.811 -12.621 11.039 1 25.02 ? C11 JN3 501 A 1 HETATM 14 C C12 JN3 . . . C 3 10.003 -13.824 11.605 1 21.54 ? C12 JN3 501 A 1 HETATM 15 C C13 JN3 . . . C 3 10.909 -15.028 11.886 1 18.84 ? C13 JN3 501 A 1 HETATM 16 C C14 JN3 . . . C 3 11.987 -14.575 12.829 1 24.2 ? C14 JN3 501 A 1 HETATM 17 C C15 JN3 . . . C 3 12.717 -15.875 13.053 1 25.07 ? C15 JN3 501 A 1 HETATM 18 C C16 JN3 . . . C 3 11.581 -16.881 13.285 1 28.13 ? C16 JN3 501 A 1 HETATM 19 C C17 JN3 . . . C 3 10.309 -16.131 12.799 1 23.18 ? C17 JN3 501 A 1 HETATM 20 C C18 JN3 . . . C 3 11.488 -15.628 10.588 1 23.61 ? C18 JN3 501 A 1 HETATM 21 C C19 JN3 . . . C 3 13.507 -11.669 10.035 1 30.91 ? C19 JN3 501 A 1 HETATM 22 C C20 JN3 . . . C 3 9.369 -17.159 12.143 1 22.47 ? C20 JN3 501 A 1 HETATM 23 C C21 JN3 . . . C 3 8.098 -16.544 11.527 1 23.73 ? C21 JN3 501 A 1 HETATM 24 C C22 JN3 . . . C 3 8.928 -18.19 13.206 1 30.81 ? C22 JN3 501 A 1 HETATM 25 C C23 JN3 . . . C 3 8.348 -19.401 12.468 1 29.79 ? C23 JN3 501 A 1 HETATM 26 O O25 JN3 . . . C 3 8.436 -21.592 13.346 1 47.45 ? O25 JN3 501 A 1 HETATM 27 C C24 JN3 . . . C 3 7.856 -20.489 13.411 1 38.06 ? C24 JN3 501 A 1 HETATM 28 O O26 JN3 . . . C 3 6.888 -20.214 14.143 1 33.8 ? O26 JN3 501 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #