data_6HL4 # _model_server_result.job_id tSYK6jVfJLIdpbU72WwPFA _model_server_result.datetime_utc '2024-11-28 12:21:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hl4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":200}' # _entry.id 6HL4 # _exptl.entry_id 6HL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HL4 _cell.length_a 59.741 _cell.length_b 108.117 _cell.length_c 188.181 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,L,M 1 1 C,D,I,J,K,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 86 A CYS 86 1_555 E FE1 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc2 A SG CYS 91 A CYS 91 1_555 E FE1 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A SG CYS 127 A CYS 127 1_555 E FE2 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc4 A SG CYS 131 A CYS 131 1_555 E FE2 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc5 B SG CYS 347 B CYS 347 1_555 F FE1 SF4 . B SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc6 B SG CYS 350 B CYS 350 1_555 F FE4 SF4 . B SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc7 B SG CYS 353 B CYS 353 1_555 F FE2 SF4 . B SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc8 B SG CYS 393 B CYS 393 1_555 F FE3 SF4 . B SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc9 C SG CYS 86 C CYS 86 1_555 I FE1 FES . C FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc10 C SG CYS 91 C CYS 91 1_555 I FE1 FES . C FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc11 C SG CYS 127 C CYS 127 1_555 I FE2 FES . C FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc12 C SG CYS 131 C CYS 131 1_555 I FE2 FES . C FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc13 D SG CYS 347 D CYS 347 1_555 J FE1 SF4 . D SF4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc14 D SG CYS 350 D CYS 350 1_555 J FE4 SF4 . D SF4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc15 D SG CYS 353 D CYS 353 1_555 J FE2 SF4 . D SF4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc16 D SG CYS 393 D CYS 393 1_555 J FE3 SF4 . D SF4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 6HL4 _atom_sites.fract_transf_matrix[1][1] 0.016739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FES A 1 200 200 FES FES . F 4 SF4 B 1 501 500 SF4 SF4 . G 5 FMN B 1 502 501 FMN FMN . H 6 CL B 1 503 1 CL CL . I 3 FES C 1 200 200 FES FES . J 4 SF4 D 1 500 500 SF4 SF4 . K 5 FMN D 1 501 501 FMN FMN . L 7 HOH A 1 301 111 HOH HOH . L 7 HOH A 2 302 60 HOH HOH . L 7 HOH A 3 303 77 HOH HOH . L 7 HOH A 4 304 90 HOH HOH . L 7 HOH A 5 305 26 HOH HOH . L 7 HOH A 6 306 89 HOH HOH . L 7 HOH A 7 307 4 HOH HOH . L 7 HOH A 8 308 80 HOH HOH . L 7 HOH A 9 309 81 HOH HOH . L 7 HOH A 10 310 86 HOH HOH . L 7 HOH A 11 311 88 HOH HOH . L 7 HOH A 12 312 52 HOH HOH . L 7 HOH A 13 313 84 HOH HOH . L 7 HOH A 14 314 76 HOH HOH . L 7 HOH A 15 315 87 HOH HOH . L 7 HOH A 16 316 82 HOH HOH . L 7 HOH A 17 317 127 HOH HOH . L 7 HOH A 18 318 126 HOH HOH . L 7 HOH A 19 319 83 HOH HOH . M 7 HOH B 1 601 33 HOH HOH . M 7 HOH B 2 602 18 HOH HOH . M 7 HOH B 3 603 69 HOH HOH . M 7 HOH B 4 604 92 HOH HOH . M 7 HOH B 5 605 19 HOH HOH . M 7 HOH B 6 606 45 HOH HOH . M 7 HOH B 7 607 30 HOH HOH . M 7 HOH B 8 608 62 HOH HOH . M 7 HOH B 9 609 49 HOH HOH . M 7 HOH B 10 610 7 HOH HOH . M 7 HOH B 11 611 37 HOH HOH . M 7 HOH B 12 612 14 HOH HOH . M 7 HOH B 13 613 29 HOH HOH . M 7 HOH B 14 614 6 HOH HOH . M 7 HOH B 15 615 97 HOH HOH . M 7 HOH B 16 616 16 HOH HOH . M 7 HOH B 17 617 79 HOH HOH . M 7 HOH B 18 618 27 HOH HOH . M 7 HOH B 19 619 23 HOH HOH . M 7 HOH B 20 620 32 HOH HOH . M 7 HOH B 21 621 41 HOH HOH . M 7 HOH B 22 622 85 HOH HOH . M 7 HOH B 23 623 1 HOH HOH . M 7 HOH B 24 624 34 HOH HOH . M 7 HOH B 25 625 72 HOH HOH . M 7 HOH B 26 626 70 HOH HOH . M 7 HOH B 27 627 103 HOH HOH . M 7 HOH B 28 628 100 HOH HOH . M 7 HOH B 29 629 43 HOH HOH . M 7 HOH B 30 630 50 HOH HOH . M 7 HOH B 31 631 94 HOH HOH . M 7 HOH B 32 632 11 HOH HOH . M 7 HOH B 33 633 109 HOH HOH . M 7 HOH B 34 634 106 HOH HOH . M 7 HOH B 35 635 93 HOH HOH . M 7 HOH B 36 636 104 HOH HOH . M 7 HOH B 37 637 102 HOH HOH . M 7 HOH B 38 638 107 HOH HOH . M 7 HOH B 39 639 56 HOH HOH . M 7 HOH B 40 640 96 HOH HOH . M 7 HOH B 41 641 12 HOH HOH . M 7 HOH B 42 642 95 HOH HOH . M 7 HOH B 43 643 61 HOH HOH . M 7 HOH B 44 644 15 HOH HOH . M 7 HOH B 45 645 64 HOH HOH . M 7 HOH B 46 646 105 HOH HOH . M 7 HOH B 47 647 66 HOH HOH . M 7 HOH B 48 648 114 HOH HOH . M 7 HOH B 49 649 120 HOH HOH . M 7 HOH B 50 650 78 HOH HOH . M 7 HOH B 51 651 99 HOH HOH . M 7 HOH B 52 652 101 HOH HOH . M 7 HOH B 53 653 98 HOH HOH . N 7 HOH C 1 301 53 HOH HOH . N 7 HOH C 2 302 124 HOH HOH . N 7 HOH C 3 303 42 HOH HOH . N 7 HOH C 4 304 28 HOH HOH . N 7 HOH C 5 305 9 HOH HOH . N 7 HOH C 6 306 123 HOH HOH . N 7 HOH C 7 307 31 HOH HOH . N 7 HOH C 8 308 25 HOH HOH . N 7 HOH C 9 309 51 HOH HOH . N 7 HOH C 10 310 46 HOH HOH . O 7 HOH D 1 601 40 HOH HOH . O 7 HOH D 2 602 3 HOH HOH . O 7 HOH D 3 603 55 HOH HOH . O 7 HOH D 4 604 39 HOH HOH . O 7 HOH D 5 605 58 HOH HOH . O 7 HOH D 6 606 21 HOH HOH . O 7 HOH D 7 607 2 HOH HOH . O 7 HOH D 8 608 91 HOH HOH . O 7 HOH D 9 609 59 HOH HOH . O 7 HOH D 10 610 74 HOH HOH . O 7 HOH D 11 611 38 HOH HOH . O 7 HOH D 12 612 112 HOH HOH . O 7 HOH D 13 613 24 HOH HOH . O 7 HOH D 14 614 75 HOH HOH . O 7 HOH D 15 615 110 HOH HOH . O 7 HOH D 16 616 22 HOH HOH . O 7 HOH D 17 617 10 HOH HOH . O 7 HOH D 18 618 5 HOH HOH . O 7 HOH D 19 619 20 HOH HOH . O 7 HOH D 20 620 13 HOH HOH . O 7 HOH D 21 621 125 HOH HOH . O 7 HOH D 22 622 44 HOH HOH . O 7 HOH D 23 623 17 HOH HOH . O 7 HOH D 24 624 121 HOH HOH . O 7 HOH D 25 625 108 HOH HOH . O 7 HOH D 26 626 113 HOH HOH . O 7 HOH D 27 627 63 HOH HOH . O 7 HOH D 28 628 36 HOH HOH . O 7 HOH D 29 629 119 HOH HOH . O 7 HOH D 30 630 8 HOH HOH . O 7 HOH D 31 631 47 HOH HOH . O 7 HOH D 32 632 54 HOH HOH . O 7 HOH D 33 633 68 HOH HOH . O 7 HOH D 34 634 117 HOH HOH . O 7 HOH D 35 635 65 HOH HOH . O 7 HOH D 36 636 48 HOH HOH . O 7 HOH D 37 637 71 HOH HOH . O 7 HOH D 38 638 122 HOH HOH . O 7 HOH D 39 639 35 HOH HOH . O 7 HOH D 40 640 57 HOH HOH . O 7 HOH D 41 641 115 HOH HOH . O 7 HOH D 42 642 73 HOH HOH . O 7 HOH D 43 643 116 HOH HOH . O 7 HOH D 44 644 67 HOH HOH . O 7 HOH D 45 645 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . E 3 4.066 -1.172 -14.085 1 25.19 ? FE1 FES 200 A 1 HETATM 2 FE FE2 FES . . . E 3 2.487 -3.212 -14.838 1 28.28 ? FE2 FES 200 A 1 HETATM 3 S S1 FES . . . E 3 2.528 -1.17 -15.664 1 25.74 ? S1 FES 200 A 1 HETATM 4 S S2 FES . . . E 3 4.283 -3.299 -13.569 1 25.04 ? S2 FES 200 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #