data_6HNV
#
_model_server_result.job_id            b5MI2KbB5ZrdjjRzOA8x5A 
_model_server_result.datetime_utc      '2024-11-12 21:46:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hnv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":605}' 
#
_entry.id    6HNV 
#
_exptl.entry_id    6HNV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              160.125 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-OXOADIPIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HNV 
_cell.length_a            74.57 
_cell.length_b            88.54 
_cell.length_c            160.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HNV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             L 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 341 A LYS 341 1_555 C C4A PLP . A PLP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
covale ? covale2 B NZ LYS 341 B LYS 341 1_555 H C4A PLP . B PLP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? 
#
_chem_comp.formula           'C6 H8 O5' 
_chem_comp.formula_weight    160.125 
_chem_comp.id                OOG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-OXOADIPIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 OOG sing 281 n n 
C2 C1 OOG sing 282 n n 
C3 C4 OOG sing 283 n n 
C4 C5 OOG sing 284 n n 
C6 O4 OOG sing 285 n n 
C6 O3 OOG doub 286 n n 
C6 C5 OOG sing 287 n n 
C5 O5 OOG doub 288 n n 
C1 O1 OOG doub 289 n n 
C1 O2 OOG sing 290 n n 
C2 H21C OOG sing 291 n n 
C2 H22C OOG sing 292 n n 
C3 H31C OOG sing 293 n n 
C3 H32C OOG sing 294 n n 
C4 H41C OOG sing 295 n n 
C4 H42C OOG sing 296 n n 
O4 H4 OOG sing 297 n n 
O2 H2 OOG sing 298 n n 
#
_atom_sites.entry_id                     6HNV 
_atom_sites.fract_transf_matrix[1][1]    0.01341 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011294 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006213 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PLP A 1 601 1341 PLP LLP . 
D 3 BCN A 1 602 3 BCN BCN . 
E 4 MPD A 1 603 5 MPD MPD . 
F 5 PHE A 1 604 6 PHE PHE . 
G 6 PPY A 1 605 8 PPY PPY . 
H 2 PLP B 1 601 1341 PLP LLP . 
I 7 UN1 B 1 602 1 UN1 UN1 . 
J 3 BCN B 1 603 2 BCN BCN . 
K 3 BCN B 1 604 4 BCN BCN . 
L 8 OOG B 1 605 7 OOG OOG . 
M 9 HOH A 1 701 195 HOH HOH . 
M 9 HOH A 2 702 158 HOH HOH . 
M 9 HOH A 3 703 145 HOH HOH . 
M 9 HOH A 4 704 70 HOH HOH . 
M 9 HOH A 5 705 58 HOH HOH . 
M 9 HOH A 6 706 15 HOH HOH . 
M 9 HOH A 7 707 180 HOH HOH . 
M 9 HOH A 8 708 119 HOH HOH . 
M 9 HOH A 9 709 64 HOH HOH . 
M 9 HOH A 10 710 93 HOH HOH . 
M 9 HOH A 11 711 90 HOH HOH . 
M 9 HOH A 12 712 68 HOH HOH . 
M 9 HOH A 13 713 54 HOH HOH . 
M 9 HOH A 14 714 130 HOH HOH . 
M 9 HOH A 15 715 194 HOH HOH . 
M 9 HOH A 16 716 6 HOH HOH . 
M 9 HOH A 17 717 32 HOH HOH . 
M 9 HOH A 18 718 23 HOH HOH . 
M 9 HOH A 19 719 34 HOH HOH . 
M 9 HOH A 20 720 108 HOH HOH . 
M 9 HOH A 21 721 14 HOH HOH . 
M 9 HOH A 22 722 157 HOH HOH . 
M 9 HOH A 23 723 170 HOH HOH . 
M 9 HOH A 24 724 61 HOH HOH . 
M 9 HOH A 25 725 187 HOH HOH . 
M 9 HOH A 26 726 12 HOH HOH . 
M 9 HOH A 27 727 172 HOH HOH . 
M 9 HOH A 28 728 96 HOH HOH . 
M 9 HOH A 29 729 22 HOH HOH . 
M 9 HOH A 30 730 84 HOH HOH . 
M 9 HOH A 31 731 67 HOH HOH . 
M 9 HOH A 32 732 18 HOH HOH . 
M 9 HOH A 33 733 154 HOH HOH . 
M 9 HOH A 34 734 20 HOH HOH . 
M 9 HOH A 35 735 43 HOH HOH . 
M 9 HOH A 36 736 193 HOH HOH . 
M 9 HOH A 37 737 121 HOH HOH . 
M 9 HOH A 38 738 137 HOH HOH . 
M 9 HOH A 39 739 163 HOH HOH . 
M 9 HOH A 40 740 178 HOH HOH . 
M 9 HOH A 41 741 37 HOH HOH . 
M 9 HOH A 42 742 92 HOH HOH . 
M 9 HOH A 43 743 107 HOH HOH . 
M 9 HOH A 44 744 181 HOH HOH . 
M 9 HOH A 45 745 85 HOH HOH . 
M 9 HOH A 46 746 95 HOH HOH . 
M 9 HOH A 47 747 115 HOH HOH . 
M 9 HOH A 48 748 155 HOH HOH . 
M 9 HOH A 49 749 11 HOH HOH . 
M 9 HOH A 50 750 184 HOH HOH . 
M 9 HOH A 51 751 134 HOH HOH . 
M 9 HOH A 52 752 79 HOH HOH . 
M 9 HOH A 53 753 88 HOH HOH . 
M 9 HOH A 54 754 109 HOH HOH . 
M 9 HOH A 55 755 30 HOH HOH . 
M 9 HOH A 56 756 131 HOH HOH . 
M 9 HOH A 57 757 47 HOH HOH . 
M 9 HOH A 58 758 105 HOH HOH . 
M 9 HOH A 59 759 146 HOH HOH . 
M 9 HOH A 60 760 186 HOH HOH . 
M 9 HOH A 61 761 190 HOH HOH . 
M 9 HOH A 62 762 166 HOH HOH . 
M 9 HOH A 63 763 144 HOH HOH . 
M 9 HOH A 64 764 191 HOH HOH . 
M 9 HOH A 65 765 120 HOH HOH . 
M 9 HOH A 66 766 78 HOH HOH . 
M 9 HOH A 67 767 42 HOH HOH . 
M 9 HOH A 68 768 9 HOH HOH . 
M 9 HOH A 69 769 91 HOH HOH . 
M 9 HOH A 70 770 98 HOH HOH . 
M 9 HOH A 71 771 103 HOH HOH . 
M 9 HOH A 72 772 116 HOH HOH . 
M 9 HOH A 73 773 159 HOH HOH . 
M 9 HOH A 74 774 49 HOH HOH . 
M 9 HOH A 75 775 60 HOH HOH . 
M 9 HOH A 76 776 173 HOH HOH . 
M 9 HOH A 77 777 7 HOH HOH . 
M 9 HOH A 78 778 66 HOH HOH . 
M 9 HOH A 79 779 128 HOH HOH . 
M 9 HOH A 80 780 174 HOH HOH . 
M 9 HOH A 81 781 71 HOH HOH . 
M 9 HOH A 82 782 81 HOH HOH . 
M 9 HOH A 83 783 175 HOH HOH . 
M 9 HOH A 84 784 171 HOH HOH . 
M 9 HOH A 85 785 65 HOH HOH . 
M 9 HOH A 86 786 75 HOH HOH . 
M 9 HOH A 87 787 86 HOH HOH . 
M 9 HOH A 88 788 77 HOH HOH . 
M 9 HOH A 89 789 82 HOH HOH . 
N 9 HOH B 1 701 141 HOH HOH . 
N 9 HOH B 2 702 140 HOH HOH . 
N 9 HOH B 3 703 122 HOH HOH . 
N 9 HOH B 4 704 150 HOH HOH . 
N 9 HOH B 5 705 1 HOH HOH . 
N 9 HOH B 6 706 151 HOH HOH . 
N 9 HOH B 7 707 147 HOH HOH . 
N 9 HOH B 8 708 139 HOH HOH . 
N 9 HOH B 9 709 152 HOH HOH . 
N 9 HOH B 10 710 19 HOH HOH . 
N 9 HOH B 11 711 89 HOH HOH . 
N 9 HOH B 12 712 153 HOH HOH . 
N 9 HOH B 13 713 33 HOH HOH . 
N 9 HOH B 14 714 35 HOH HOH . 
N 9 HOH B 15 715 149 HOH HOH . 
N 9 HOH B 16 716 118 HOH HOH . 
N 9 HOH B 17 717 169 HOH HOH . 
N 9 HOH B 18 718 132 HOH HOH . 
N 9 HOH B 19 719 192 HOH HOH . 
N 9 HOH B 20 720 29 HOH HOH . 
N 9 HOH B 21 721 143 HOH HOH . 
N 9 HOH B 22 722 52 HOH HOH . 
N 9 HOH B 23 723 100 HOH HOH . 
N 9 HOH B 24 724 53 HOH HOH . 
N 9 HOH B 25 725 62 HOH HOH . 
N 9 HOH B 26 726 44 HOH HOH . 
N 9 HOH B 27 727 10 HOH HOH . 
N 9 HOH B 28 728 63 HOH HOH . 
N 9 HOH B 29 729 4 HOH HOH . 
N 9 HOH B 30 730 46 HOH HOH . 
N 9 HOH B 31 731 168 HOH HOH . 
N 9 HOH B 32 732 24 HOH HOH . 
N 9 HOH B 33 733 17 HOH HOH . 
N 9 HOH B 34 734 74 HOH HOH . 
N 9 HOH B 35 735 179 HOH HOH . 
N 9 HOH B 36 736 183 HOH HOH . 
N 9 HOH B 37 737 41 HOH HOH . 
N 9 HOH B 38 738 3 HOH HOH . 
N 9 HOH B 39 739 185 HOH HOH . 
N 9 HOH B 40 740 40 HOH HOH . 
N 9 HOH B 41 741 31 HOH HOH . 
N 9 HOH B 42 742 13 HOH HOH . 
N 9 HOH B 43 743 124 HOH HOH . 
N 9 HOH B 44 744 167 HOH HOH . 
N 9 HOH B 45 745 50 HOH HOH . 
N 9 HOH B 46 746 69 HOH HOH . 
N 9 HOH B 47 747 26 HOH HOH . 
N 9 HOH B 48 748 123 HOH HOH . 
N 9 HOH B 49 749 142 HOH HOH . 
N 9 HOH B 50 750 102 HOH HOH . 
N 9 HOH B 51 751 16 HOH HOH . 
N 9 HOH B 52 752 161 HOH HOH . 
N 9 HOH B 53 753 114 HOH HOH . 
N 9 HOH B 54 754 2 HOH HOH . 
N 9 HOH B 55 755 160 HOH HOH . 
N 9 HOH B 56 756 188 HOH HOH . 
N 9 HOH B 57 757 106 HOH HOH . 
N 9 HOH B 58 758 38 HOH HOH . 
N 9 HOH B 59 759 51 HOH HOH . 
N 9 HOH B 60 760 5 HOH HOH . 
N 9 HOH B 61 761 94 HOH HOH . 
N 9 HOH B 62 762 28 HOH HOH . 
N 9 HOH B 63 763 45 HOH HOH . 
N 9 HOH B 64 764 189 HOH HOH . 
N 9 HOH B 65 765 72 HOH HOH . 
N 9 HOH B 66 766 126 HOH HOH . 
N 9 HOH B 67 767 25 HOH HOH . 
N 9 HOH B 68 768 104 HOH HOH . 
N 9 HOH B 69 769 162 HOH HOH . 
N 9 HOH B 70 770 156 HOH HOH . 
N 9 HOH B 71 771 27 HOH HOH . 
N 9 HOH B 72 772 182 HOH HOH . 
N 9 HOH B 73 773 164 HOH HOH . 
N 9 HOH B 74 774 125 HOH HOH . 
N 9 HOH B 75 775 133 HOH HOH . 
N 9 HOH B 76 776 36 HOH HOH . 
N 9 HOH B 77 777 135 HOH HOH . 
N 9 HOH B 78 778 101 HOH HOH . 
N 9 HOH B 79 779 48 HOH HOH . 
N 9 HOH B 80 780 136 HOH HOH . 
N 9 HOH B 81 781 8 HOH HOH . 
N 9 HOH B 82 782 127 HOH HOH . 
N 9 HOH B 83 783 21 HOH HOH . 
N 9 HOH B 84 784 73 HOH HOH . 
N 9 HOH B 85 785 129 HOH HOH . 
N 9 HOH B 86 786 57 HOH HOH . 
N 9 HOH B 87 787 177 HOH HOH . 
N 9 HOH B 88 788 39 HOH HOH . 
N 9 HOH B 89 789 99 HOH HOH . 
N 9 HOH B 90 790 138 HOH HOH . 
N 9 HOH B 91 791 165 HOH HOH . 
N 9 HOH B 92 792 83 HOH HOH . 
N 9 HOH B 93 793 148 HOH HOH . 
N 9 HOH B 94 794 112 HOH HOH . 
N 9 HOH B 95 795 176 HOH HOH . 
N 9 HOH B 96 796 87 HOH HOH . 
N 9 HOH B 97 797 110 HOH HOH . 
N 9 HOH B 98 798 97 HOH HOH . 
N 9 HOH B 99 799 80 HOH HOH . 
N 9 HOH B 100 800 55 HOH HOH . 
N 9 HOH B 101 801 59 HOH HOH . 
N 9 HOH B 102 802 117 HOH HOH . 
N 9 HOH B 103 803 111 HOH HOH . 
N 9 HOH B 104 804 113 HOH HOH . 
N 9 HOH B 105 805 56 HOH HOH . 
N 9 HOH B 106 806 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 OOG . B . L 8 64.789 35.211 -5.872 0.5 56.4 ? C2 OOG 605 B 1 
HETATM 2 C C3 OOG . B . L 8 65.368 35.658 -7.221 0.5 59.9 ? C3 OOG 605 B 1 
HETATM 3 C C4 OOG . B . L 8 64.546 35.198 -8.434 0.5 59.76 ? C4 OOG 605 B 1 
HETATM 4 C C6 OOG . B . L 8 66.015 33.937 -9.968 0.5 65.85 ? C6 OOG 605 B 1 
HETATM 5 O O4 OOG . B . L 8 65.463 32.855 -9.737 0.5 66.5 ? O4 OOG 605 B 1 
HETATM 6 O O3 OOG . B . L 8 67.137 34.021 -10.482 0.5 66.89 ? O3 OOG 605 B 1 
HETATM 7 C C5 OOG . B . L 8 65.374 35.036 -9.687 0.5 61.46 ? C5 OOG 605 B 1 
HETATM 8 C C1 OOG . B . L 8 65.779 34.726 -4.82 0.5 54.96 ? C1 OOG 605 B 1 
HETATM 9 O O1 OOG . B . L 8 66.997 34.755 -5.094 0.5 53.27 ? O1 OOG 605 B 1 
HETATM 10 O O2 OOG . B . L 8 65.328 34.329 -3.714 0.5 47.97 ? O2 OOG 605 B 1 
HETATM 11 O O5 OOG . B . L 8 65.422 35.976 -10.488 0.5 57.14 ? O5 OOG 605 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           355 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#