data_6HOD # _model_server_result.job_id BNYHfZ7FhsXztbReapx9Mw _model_server_result.datetime_utc '2024-11-05 08:01:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hod # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6HOD # _exptl.entry_id 6HOD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 350.413 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[3-(phenylsulfonylamino)prop-1-ynyl]benzenesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HOD _cell.length_a 121.535 _cell.length_b 121.535 _cell.length_c 33.717 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HOD _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H14 N2 O4 S2' _chem_comp.formula_weight 350.413 _chem_comp.id GHK _chem_comp.mon_nstd_flag . _chem_comp.name 4-[3-(phenylsulfonylamino)prop-1-ynyl]benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 S1 GHK doub 70 n n C2 C3 GHK doub 71 n y C2 C1 GHK sing 72 n y S1 O1 GHK doub 73 n n S1 C1 GHK sing 74 n n S1 N1 GHK sing 75 n n O4 S2 GHK doub 76 n n C3 C4 GHK sing 77 n y C1 C6 GHK doub 78 n y O3 S2 GHK doub 79 n n S2 C10 GHK sing 80 n n S2 N2 GHK sing 81 n n C11 C12 GHK doub 82 n y C11 C10 GHK sing 83 n y C4 C7 GHK sing 84 n n C4 C5 GHK doub 85 n y C12 C13 GHK sing 86 n y C10 C15 GHK doub 87 n y C7 C8 GHK trip 88 n n C6 C5 GHK sing 89 n y C8 C9 GHK sing 90 n n N2 C9 GHK sing 91 n n C13 C14 GHK doub 92 n y C15 C14 GHK sing 93 n y C14 H1 GHK sing 94 n n C5 H2 GHK sing 95 n n C6 H3 GHK sing 96 n n C11 H4 GHK sing 97 n n C9 H5 GHK sing 98 n n C9 H6 GHK sing 99 n n C12 H7 GHK sing 100 n n C13 H8 GHK sing 101 n n N1 H9 GHK sing 102 n n N1 H10 GHK sing 103 n n N2 H11 GHK sing 104 n n C3 H12 GHK sing 105 n n C2 H13 GHK sing 106 n n C15 H14 GHK sing 107 n n # _atom_sites.entry_id 6HOD _atom_sites.fract_transf_matrix[1][1] 0.008228 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GHK A 1 301 1 GHK DRG . C 3 HOH A 1 401 12 HOH HOH . C 3 HOH A 2 402 2 HOH HOH . C 3 HOH A 3 403 5 HOH HOH . C 3 HOH A 4 404 24 HOH HOH . C 3 HOH A 5 405 9 HOH HOH . C 3 HOH A 6 406 27 HOH HOH . C 3 HOH A 7 407 34 HOH HOH . C 3 HOH A 8 408 14 HOH HOH . C 3 HOH A 9 409 25 HOH HOH . C 3 HOH A 10 410 10 HOH HOH . C 3 HOH A 11 411 15 HOH HOH . C 3 HOH A 12 412 20 HOH HOH . C 3 HOH A 13 413 32 HOH HOH . C 3 HOH A 14 414 3 HOH HOH . C 3 HOH A 15 415 7 HOH HOH . C 3 HOH A 16 416 17 HOH HOH . C 3 HOH A 17 417 1 HOH HOH . C 3 HOH A 18 418 30 HOH HOH . C 3 HOH A 19 419 26 HOH HOH . C 3 HOH A 20 420 31 HOH HOH . C 3 HOH A 21 421 22 HOH HOH . C 3 HOH A 22 422 35 HOH HOH . C 3 HOH A 23 423 6 HOH HOH . C 3 HOH A 24 424 33 HOH HOH . C 3 HOH A 25 425 11 HOH HOH . C 3 HOH A 26 426 13 HOH HOH . C 3 HOH A 27 427 18 HOH HOH . C 3 HOH A 28 428 4 HOH HOH . C 3 HOH A 29 429 16 HOH HOH . C 3 HOH A 30 430 8 HOH HOH . C 3 HOH A 31 431 21 HOH HOH . C 3 HOH A 32 432 29 HOH HOH . C 3 HOH A 33 433 23 HOH HOH . C 3 HOH A 34 434 28 HOH HOH . C 3 HOH A 35 435 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 GHK . . . B 2 -9.644 -27.488 3.672 1 23.18 ? C4 GHK 301 A 1 HETATM 2 C C14 GHK . . . B 2 -1.092 -24.561 5.234 1 34.19 ? C14 GHK 301 A 1 HETATM 3 C C5 GHK . . . B 2 -10.628 -27.82 4.568 1 22.01 ? C5 GHK 301 A 1 HETATM 4 C C6 GHK . . . B 2 -11.944 -27.988 4.147 1 22.5 ? C6 GHK 301 A 1 HETATM 5 C C11 GHK . . . B 2 -3.197 -24.147 3.499 1 36.69 ? C11 GHK 301 A 1 HETATM 6 C C7 GHK . . . B 2 -8.336 -27.259 4.099 1 29.31 ? C7 GHK 301 A 1 HETATM 7 C C8 GHK . . . B 2 -7.282 -26.921 4.444 1 31.73 ? C8 GHK 301 A 1 HETATM 8 C C9 GHK . . . B 2 -6.018 -26.348 4.893 1 39.59 ? C9 GHK 301 A 1 HETATM 9 C C10 GHK . . . B 2 -2.939 -25.451 3.961 1 40.95 ? C10 GHK 301 A 1 HETATM 10 C C12 GHK . . . B 2 -2.411 -23.053 3.913 1 37.22 ? C12 GHK 301 A 1 HETATM 11 C C13 GHK . . . B 2 -1.329 -23.29 4.747 1 31.54 ? C13 GHK 301 A 1 HETATM 12 N N1 GHK . . . B 2 -14.46 -29.459 2.87 1 26.62 ? N1 GHK 301 A 1 HETATM 13 N N2 GHK . . . B 2 -5.006 -27.356 4.662 1 36.77 ? N2 GHK 301 A 1 HETATM 14 C C3 GHK . . . B 2 -9.959 -27.308 2.339 1 22.89 ? C3 GHK 301 A 1 HETATM 15 S S1 GHK . . . B 2 -13.882 -28.002 2.147 1 23.92 ? S1 GHK 301 A 1 HETATM 16 O O1 GHK . . . B 2 -14.601 -26.749 2.561 1 23 ? O1 GHK 301 A 1 HETATM 17 O O2 GHK . . . B 2 -13.81 -28.203 0.686 1 24.21 ? O2 GHK 301 A 1 HETATM 18 C C1 GHK . . . B 2 -12.255 -27.763 2.771 1 22.86 ? C1 GHK 301 A 1 HETATM 19 C C2 GHK . . . B 2 -11.268 -27.463 1.909 1 24.49 ? C2 GHK 301 A 1 HETATM 20 S S2 GHK . . . B 2 -3.959 -26.821 3.437 1 40.6 ? S2 GHK 301 A 1 HETATM 21 O O3 GHK . . . B 2 -3.018 -27.978 3.319 1 39.34 ? O3 GHK 301 A 1 HETATM 22 O O4 GHK . . . B 2 -4.803 -26.499 2.232 1 39.09 ? O4 GHK 301 A 1 HETATM 23 C C15 GHK . . . B 2 -1.865 -25.669 4.858 1 37.7 ? C15 GHK 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #