data_6HPP # _model_server_result.job_id l7LFL4blIVDzyF7n3R5kMA _model_server_result.datetime_utc '2024-11-27 20:35:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hpp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":405}' # _entry.id 6HPP # _exptl.entry_id 6HPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 74.079 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROPANOIC ACID' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.38 _cell.angle_gamma 90 _cell.entry_id 6HPP _cell.length_a 180.69 _cell.length_b 133.73 _cell.length_c 158.89 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 N N N ? 5 O N N ? 5 S N N ? 5 T N N ? 5 X N N ? 5 BA N N ? 5 CA N N ? 5 DA N N ? 5 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 71 A ILE 71 1_555 I NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? metalc ? metalc2 B O ILE 71 B ILE 71 1_555 Q NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc3 C O PRO 68 C PRO 68 1_555 V NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc4 C O ILE 71 C ILE 71 1_555 V NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc5 D O ILE 71 D ILE 71 1_555 Z NA NA . D NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc6 E O ILE 71 E ILE 71 1_555 FA NA NA . E NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? # _chem_comp.formula 'C3 H6 O2' _chem_comp.formula_weight 74.079 _chem_comp.id PPI _chem_comp.mon_nstd_flag . _chem_comp.name 'PROPANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PPI sing 342 n n C1 O1 PPI doub 343 n n C1 O2 PPI sing 344 n n C2 C3 PPI sing 345 n n C2 H21 PPI sing 346 n n C2 H22 PPI sing 347 n n C3 H31 PPI sing 348 n n C3 H32 PPI sing 349 n n C3 H33 PPI sing 350 n n O2 HO2 PPI sing 351 n n # _atom_sites.entry_id 6HPP _atom_sites.fract_transf_matrix[1][1] 0.005534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001114 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CL A 1 401 405 CL CL . G 2 CL A 1 402 406 CL CL . H 2 CL A 1 403 407 CL CL . I 3 NA A 1 404 408 NA NA . J 3 NA A 1 405 409 NA NA . K 4 LMT A 1 406 411 LMT LMT . L 4 LMT A 1 407 412 LMT LMT . M 5 PPI A 1 408 1 PPI PPI . N 5 PPI A 1 409 1 PPI PPI . O 5 PPI A 1 410 1 PPI PPI . P 2 CL B 1 401 405 CL CL . Q 3 NA B 1 402 406 NA NA . R 4 LMT B 1 403 408 LMT LMT . S 5 PPI B 1 404 1 PPI PPI . T 5 PPI B 1 405 1 PPI PPI . U 2 CL C 1 401 405 CL CL . V 3 NA C 1 402 406 NA NA . W 4 LMT C 1 403 408 LMT LMT . X 5 PPI C 1 404 1 PPI PPI . Y 2 CL D 1 401 405 CL CL . Z 3 NA D 1 402 406 NA NA . AA 4 LMT D 1 403 408 LMT LMT . BA 5 PPI D 1 404 1 PPI PPI . CA 5 PPI D 1 405 1 PPI PPI . DA 5 PPI D 1 406 1 PPI PPI . EA 2 CL E 1 401 405 CL CL . FA 3 NA E 1 402 406 NA NA . GA 4 LMT E 1 403 408 LMT LMT . HA 5 PPI E 1 404 1 PPI PPI . IA 6 HOH A 1 501 515 HOH HOH . IA 6 HOH A 2 502 597 HOH HOH . IA 6 HOH A 3 503 539 HOH HOH . IA 6 HOH A 4 504 10 HOH HOH . JA 6 HOH B 1 501 556 HOH HOH . JA 6 HOH B 2 502 3 HOH HOH . JA 6 HOH B 3 503 5 HOH HOH . JA 6 HOH B 4 504 512 HOH HOH . KA 6 HOH C 1 501 557 HOH HOH . KA 6 HOH C 2 502 567 HOH HOH . KA 6 HOH C 3 503 8 HOH HOH . KA 6 HOH C 4 504 521 HOH HOH . KA 6 HOH C 5 505 2 HOH HOH . KA 6 HOH C 6 506 4 HOH HOH . KA 6 HOH C 7 507 580 HOH HOH . KA 6 HOH C 8 508 551 HOH HOH . LA 6 HOH D 1 501 564 HOH HOH . LA 6 HOH D 2 502 1 HOH HOH . MA 6 HOH E 1 501 523 HOH HOH . MA 6 HOH E 2 502 9 HOH HOH . MA 6 HOH E 3 503 6 HOH HOH . MA 6 HOH E 4 504 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PPI . . . CA 5 58.085 -22.775 -1.679 1 169.25 ? C1 PPI 405 D 1 HETATM 2 C C2 PPI . . . CA 5 59.604 -22.598 -1.906 1 167.76 ? C2 PPI 405 D 1 HETATM 3 C C3 PPI . . . CA 5 60.487 -22.788 -0.668 1 165.89 ? C3 PPI 405 D 1 HETATM 4 O O1 PPI . . . CA 5 57.413 -22.288 -2.693 1 167.44 ? O1 PPI 405 D 1 HETATM 5 O O2 PPI . . . CA 5 57.546 -23.308 -0.728 1 171.42 ? O2 PPI 405 D 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #