data_6HPX # _model_server_result.job_id FxE_czBwj-UQT1sp6QqaZw _model_server_result.datetime_utc '2024-11-13 05:07:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hpx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6HPX # _exptl.entry_id 6HPX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HPX _cell.length_a 48.35 _cell.length_b 48.35 _cell.length_c 137.415 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HPX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6HPX _atom_sites.fract_transf_matrix[1][1] 0.020683 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 151 EDO EDO . C 2 EDO A 1 202 152 EDO EDO . D 2 EDO A 1 203 153 EDO EDO . E 2 EDO A 1 204 154 EDO EDO . F 3 GKQ A 1 205 1 GKQ FFM . G 4 HOH A 1 301 10 HOH HOH . G 4 HOH A 2 302 21 HOH HOH . G 4 HOH A 3 303 36 HOH HOH . G 4 HOH A 4 304 5 HOH HOH . G 4 HOH A 5 305 14 HOH HOH . G 4 HOH A 6 306 11 HOH HOH . G 4 HOH A 7 307 17 HOH HOH . G 4 HOH A 8 308 12 HOH HOH . G 4 HOH A 9 309 8 HOH HOH . G 4 HOH A 10 310 13 HOH HOH . G 4 HOH A 11 311 18 HOH HOH . G 4 HOH A 12 312 22 HOH HOH . G 4 HOH A 13 313 16 HOH HOH . G 4 HOH A 14 314 23 HOH HOH . G 4 HOH A 15 315 7 HOH HOH . G 4 HOH A 16 316 9 HOH HOH . G 4 HOH A 17 317 2 HOH HOH . G 4 HOH A 18 318 29 HOH HOH . G 4 HOH A 19 319 28 HOH HOH . G 4 HOH A 20 320 3 HOH HOH . G 4 HOH A 21 321 19 HOH HOH . G 4 HOH A 22 322 27 HOH HOH . G 4 HOH A 23 323 20 HOH HOH . G 4 HOH A 24 324 32 HOH HOH . G 4 HOH A 25 325 30 HOH HOH . G 4 HOH A 26 326 26 HOH HOH . G 4 HOH A 27 327 4 HOH HOH . G 4 HOH A 28 328 6 HOH HOH . G 4 HOH A 29 329 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 1.791 -3.194 27.925 1 47.91 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 2 0.618 -2.475 28.258 1 52.49 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 2 2.621 -2.507 26.914 1 47.42 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 2 2.506 -1.1 26.953 1 49.21 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #