data_6HQ5
#
_model_server_result.job_id            C3oJgOtOruWq_UoKAyPGQA 
_model_server_result.datetime_utc      '2024-10-25 20:23:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hq5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":802}' 
#
_entry.id    6HQ5 
#
_exptl.entry_id    6HQ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.206 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6HQ5 
_cell.length_a            83.857 
_cell.length_b            83.857 
_cell.length_c            138.454 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HQ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 174 A GLU 178 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc2 A OD1 ASN 241 A ASN 245 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc3 A OE2 GLU 273 A GLU 277 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc4 A OD2 ASP 302 A ASP 306 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc5 A OD1 ASP 302 A ASP 306 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? 
metalc ? metalc6 A OD1 ASP 303 A ASP 307 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc7 A OD1 ASP 325 A ASP 329 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc8 A OE1 GLU 359 A GLU 363 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc9 A OE2 GLU 359 A GLU 363 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? 
metalc ? metalc10 C O11 C2E . A C2E 801 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc11 C O21 C2E . A C2E 801 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc12 E CA CA . A CA 803 1_555 K O HOH . A HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc13 B OE2 GLU 174 B GLU 178 1_555 I CA CA . B CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc14 B OD1 ASN 241 B ASN 245 1_555 I CA CA . B CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc15 B OE2 GLU 273 B GLU 277 1_555 I CA CA . B CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc16 B OD2 ASP 302 B ASP 306 1_555 I CA CA . B CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc17 B OD1 ASP 302 B ASP 306 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? 
metalc ? metalc18 B OD1 ASP 303 B ASP 307 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc19 B OD1 ASP 325 B ASP 329 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc20 B OE1 GLU 359 B GLU 363 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc21 B OE2 GLU 359 B GLU 363 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? 
metalc ? metalc22 G O11 C2E . B C2E 801 1_555 I CA CA . B CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc23 G O21 C2E . B C2E 801 1_555 J CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc24 I CA CA . B CA 803 1_555 L O HOH . B HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
#
_chem_comp.formula           'C10 H12 N5 O6 P' 
_chem_comp.formula_weight    329.206 
_chem_comp.id                CMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'CYCLIC AMP;CAMP' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P CMP doub 146 n n 
P O2P CMP sing 147 n n 
P O5' CMP sing 148 n n 
P O3' CMP sing 149 n n 
O2P HOP2 CMP sing 150 n n 
O5' C5' CMP sing 151 n n 
C5' C4' CMP sing 152 n n 
C5' "H5'1" CMP sing 153 n n 
C5' "H5'2" CMP sing 154 n n 
C4' O4' CMP sing 155 n n 
C4' C3' CMP sing 156 n n 
C4' H4' CMP sing 157 n n 
O4' C1' CMP sing 158 n n 
C3' O3' CMP sing 159 n n 
C3' C2' CMP sing 160 n n 
C3' H3' CMP sing 161 n n 
C2' O2' CMP sing 162 n n 
C2' C1' CMP sing 163 n n 
C2' H2' CMP sing 164 n n 
O2' HO2' CMP sing 165 n n 
C1' N9 CMP sing 166 n n 
C1' H1' CMP sing 167 n n 
N9 C8 CMP sing 168 n y 
N9 C4 CMP sing 169 n y 
C8 N7 CMP doub 170 n y 
C8 H8 CMP sing 171 n n 
N7 C5 CMP sing 172 n y 
C5 C6 CMP sing 173 n y 
C5 C4 CMP doub 174 n y 
C6 N6 CMP sing 175 n n 
C6 N1 CMP doub 176 n y 
N6 HN61 CMP sing 177 n n 
N6 HN62 CMP sing 178 n n 
N1 C2 CMP sing 179 n y 
C2 N3 CMP doub 180 n y 
C2 H2 CMP sing 181 n n 
N3 C4 CMP sing 182 n y 
#
_atom_sites.entry_id                     6HQ5 
_atom_sites.fract_transf_matrix[1][1]    0.011925 
_atom_sites.fract_transf_matrix[1][2]    0.006885 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01377 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 C2E A 1 801 801 C2E C2E . 
D 3 CMP A 1 802 901 CMP CMP . 
E 4 CA A 1 803 802 CA CA . 
F 4 CA A 1 804 803 CA CA . 
G 2 C2E B 1 801 801 C2E C2E . 
H 3 CMP B 1 802 901 CMP CMP . 
I 4 CA B 1 803 802 CA CA . 
J 4 CA B 1 804 803 CA CA . 
K 5 HOH A 1 901 1 HOH HOH . 
L 5 HOH B 1 901 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P CMP . . . H 3 119.635 -26.681 -8.544 1 108.86 ? P CMP 802 B 1 
HETATM 2 O O1P CMP . . . H 3 119.426 -25.236 -8.737 1 111.38 ? O1P CMP 802 B 1 
HETATM 3 O O2P CMP . . . H 3 119.482 -27.253 -7.189 1 109.33 ? O2P CMP 802 B 1 
HETATM 4 O O5' CMP . . . H 3 121.137 -27.056 -9.079 1 106.11 ? O5' CMP 802 B 1 
HETATM 5 C C5' CMP . . . H 3 121.419 -28.448 -9.156 1 100.63 ? C5' CMP 802 B 1 
HETATM 6 C C4' CMP . . . H 3 120.413 -28.937 -10.185 1 99.52 ? C4' CMP 802 B 1 
HETATM 7 O O4' CMP . . . H 3 120.529 -30.348 -10.449 1 100.28 ? O4' CMP 802 B 1 
HETATM 8 C C3' CMP . . . H 3 119.028 -28.799 -9.608 1 98.41 ? C3' CMP 802 B 1 
HETATM 9 O O3' CMP . . . H 3 118.659 -27.429 -9.592 1 100.49 ? O3' CMP 802 B 1 
HETATM 10 C C2' CMP . . . H 3 118.237 -29.626 -10.577 1 97.47 ? C2' CMP 802 B 1 
HETATM 11 O O2' CMP . . . H 3 118.033 -28.919 -11.805 1 93.98 ? O2' CMP 802 B 1 
HETATM 12 C C1' CMP . . . H 3 119.185 -30.811 -10.784 1 99.98 ? C1' CMP 802 B 1 
HETATM 13 N N9 CMP . . . H 3 118.829 -31.937 -9.883 1 97.91 ? N9 CMP 802 B 1 
HETATM 14 C C8 CMP . . . H 3 118.871 -31.927 -8.554 1 95.74 ? C8 CMP 802 B 1 
HETATM 15 N N7 CMP . . . H 3 118.478 -33.118 -8.122 1 97.32 ? N7 CMP 802 B 1 
HETATM 16 C C5 CMP . . . H 3 118.19 -33.876 -9.175 1 94.9 ? C5 CMP 802 B 1 
HETATM 17 C C6 CMP . . . H 3 117.755 -35.14 -9.265 1 94.83 ? C6 CMP 802 B 1 
HETATM 18 N N6 CMP . . . H 3 117.567 -35.797 -8.118 1 97.65 ? N6 CMP 802 B 1 
HETATM 19 N N1 CMP . . . H 3 117.521 -35.723 -10.449 1 90.99 ? N1 CMP 802 B 1 
HETATM 20 C C2 CMP . . . H 3 117.746 -34.976 -11.612 1 94.55 ? C2 CMP 802 B 1 
HETATM 21 N N3 CMP . . . H 3 118.197 -33.654 -11.491 1 95.92 ? N3 CMP 802 B 1 
HETATM 22 C C4 CMP . . . H 3 118.409 -33.139 -10.27 1 95.47 ? C4 CMP 802 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#