data_6HSB # _model_server_result.job_id aMTjkkUX5R4J9QrGzYxfXw _model_server_result.datetime_utc '2025-03-12 04:46:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hsb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6HSB # _exptl.entry_id 6HSB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HSB _cell.length_a 188.458 _cell.length_b 188.458 _cell.length_c 188.458 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HSB _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 26_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 31_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 36_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 7 'crystal symmetry operation' 52_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 8 'crystal symmetry operation' 54_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 59_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 10 'crystal symmetry operation' 75_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 11 'crystal symmetry operation' 80_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 12 'crystal symmetry operation' 82_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 70 n n N1 C6 EPE sing 71 n n N1 C9 EPE sing 72 n n C2 C3 EPE sing 73 n n C2 H21 EPE sing 74 n n C2 H22 EPE sing 75 n n C3 N4 EPE sing 76 n n C3 H31 EPE sing 77 n n C3 H32 EPE sing 78 n n N4 C5 EPE sing 79 n n N4 C7 EPE sing 80 n n C5 C6 EPE sing 81 n n C5 H51 EPE sing 82 n n C5 H52 EPE sing 83 n n C6 H61 EPE sing 84 n n C6 H62 EPE sing 85 n n C7 C8 EPE sing 86 n n C7 H71 EPE sing 87 n n C7 H72 EPE sing 88 n n C8 O8 EPE sing 89 n n C8 H81 EPE sing 90 n n C8 H82 EPE sing 91 n n O8 HO8 EPE sing 92 n n C9 C10 EPE sing 93 n n C9 H91 EPE sing 94 n n C9 H92 EPE sing 95 n n C10 S EPE sing 96 n n C10 H101 EPE sing 97 n n C10 H102 EPE sing 98 n n S O1S EPE doub 99 n n S O2S EPE doub 100 n n S O3S EPE sing 101 n n O3S HOS3 EPE sing 102 n n # _atom_sites.entry_id 6HSB _atom_sites.fract_transf_matrix[1][1] 0.005306 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005306 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 2 GOL A 1 202 2 GOL GOL . D 3 EPE A 1 203 1 EPE EPE . E 4 HOH A 1 301 11 HOH HOH . E 4 HOH A 2 302 39 HOH HOH . E 4 HOH A 3 303 66 HOH HOH . E 4 HOH A 4 304 100 HOH HOH . E 4 HOH A 5 305 76 HOH HOH . E 4 HOH A 6 306 1 HOH HOH . E 4 HOH A 7 307 32 HOH HOH . E 4 HOH A 8 308 52 HOH HOH . E 4 HOH A 9 309 53 HOH HOH . E 4 HOH A 10 310 9 HOH HOH . E 4 HOH A 11 311 33 HOH HOH . E 4 HOH A 12 312 85 HOH HOH . E 4 HOH A 13 313 5 HOH HOH . E 4 HOH A 14 314 73 HOH HOH . E 4 HOH A 15 315 23 HOH HOH . E 4 HOH A 16 316 72 HOH HOH . E 4 HOH A 17 317 22 HOH HOH . E 4 HOH A 18 318 42 HOH HOH . E 4 HOH A 19 319 29 HOH HOH . E 4 HOH A 20 320 77 HOH HOH . E 4 HOH A 21 321 25 HOH HOH . E 4 HOH A 22 322 86 HOH HOH . E 4 HOH A 23 323 31 HOH HOH . E 4 HOH A 24 324 65 HOH HOH . E 4 HOH A 25 325 87 HOH HOH . E 4 HOH A 26 326 26 HOH HOH . E 4 HOH A 27 327 96 HOH HOH . E 4 HOH A 28 328 49 HOH HOH . E 4 HOH A 29 329 4 HOH HOH . E 4 HOH A 30 330 70 HOH HOH . E 4 HOH A 31 331 61 HOH HOH . E 4 HOH A 32 332 47 HOH HOH . E 4 HOH A 33 333 8 HOH HOH . E 4 HOH A 34 334 101 HOH HOH . E 4 HOH A 35 335 102 HOH HOH . E 4 HOH A 36 336 35 HOH HOH . E 4 HOH A 37 337 15 HOH HOH . E 4 HOH A 38 338 55 HOH HOH . E 4 HOH A 39 339 28 HOH HOH . E 4 HOH A 40 340 24 HOH HOH . E 4 HOH A 41 341 92 HOH HOH . E 4 HOH A 42 342 21 HOH HOH . E 4 HOH A 43 343 51 HOH HOH . E 4 HOH A 44 344 2 HOH HOH . E 4 HOH A 45 345 3 HOH HOH . E 4 HOH A 46 346 59 HOH HOH . E 4 HOH A 47 347 38 HOH HOH . E 4 HOH A 48 348 6 HOH HOH . E 4 HOH A 49 349 18 HOH HOH . E 4 HOH A 50 350 84 HOH HOH . E 4 HOH A 51 351 19 HOH HOH . E 4 HOH A 52 352 80 HOH HOH . E 4 HOH A 53 353 37 HOH HOH . E 4 HOH A 54 354 46 HOH HOH . E 4 HOH A 55 355 54 HOH HOH . E 4 HOH A 56 356 12 HOH HOH . E 4 HOH A 57 357 7 HOH HOH . E 4 HOH A 58 358 43 HOH HOH . E 4 HOH A 59 359 16 HOH HOH . E 4 HOH A 60 360 62 HOH HOH . E 4 HOH A 61 361 74 HOH HOH . E 4 HOH A 62 362 68 HOH HOH . E 4 HOH A 63 363 17 HOH HOH . E 4 HOH A 64 364 45 HOH HOH . E 4 HOH A 65 365 14 HOH HOH . E 4 HOH A 66 366 27 HOH HOH . E 4 HOH A 67 367 34 HOH HOH . E 4 HOH A 68 368 58 HOH HOH . E 4 HOH A 69 369 40 HOH HOH . E 4 HOH A 70 370 69 HOH HOH . E 4 HOH A 71 371 94 HOH HOH . E 4 HOH A 72 372 13 HOH HOH . E 4 HOH A 73 373 20 HOH HOH . E 4 HOH A 74 374 90 HOH HOH . E 4 HOH A 75 375 79 HOH HOH . E 4 HOH A 76 376 93 HOH HOH . E 4 HOH A 77 377 95 HOH HOH . E 4 HOH A 78 378 67 HOH HOH . E 4 HOH A 79 379 71 HOH HOH . E 4 HOH A 80 380 36 HOH HOH . E 4 HOH A 81 381 78 HOH HOH . E 4 HOH A 82 382 57 HOH HOH . E 4 HOH A 83 383 97 HOH HOH . E 4 HOH A 84 384 83 HOH HOH . E 4 HOH A 85 385 99 HOH HOH . E 4 HOH A 86 386 81 HOH HOH . E 4 HOH A 87 387 89 HOH HOH . E 4 HOH A 88 388 75 HOH HOH . E 4 HOH A 89 389 60 HOH HOH . E 4 HOH A 90 390 82 HOH HOH . E 4 HOH A 91 391 91 HOH HOH . E 4 HOH A 92 392 64 HOH HOH . E 4 HOH A 93 393 63 HOH HOH . E 4 HOH A 94 394 88 HOH HOH . E 4 HOH A 95 395 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 3 15.456 25.358 0.485 1 116.27 ? N1 EPE 203 A 1 HETATM 2 C C2 EPE . . . D 3 16.106 26.366 -0.389 1 121.43 ? C2 EPE 203 A 1 HETATM 3 C C3 EPE . . . D 3 17.631 26.341 -0.23 1 125.84 ? C3 EPE 203 A 1 HETATM 4 N N4 EPE . . . D 3 18.068 26.465 1.193 1 116.12 ? N4 EPE 203 A 1 HETATM 5 C C5 EPE . . . D 3 17.505 25.34 1.964 1 117.51 ? C5 EPE 203 A 1 HETATM 6 C C6 EPE . . . D 3 15.986 25.439 1.89 1 118.2 ? C6 EPE 203 A 1 HETATM 7 C C7 EPE . . . D 3 19.528 26.378 1.304 1 95.48 ? C7 EPE 203 A 1 HETATM 8 C C8 EPE . . . D 3 20.256 27.469 0.51 1 92.19 ? C8 EPE 203 A 1 HETATM 9 O O8 EPE . . . D 3 21.075 26.876 -0.514 1 81.82 ? O8 EPE 203 A 1 HETATM 10 C C9 EPE . . . D 3 13.969 25.466 0.365 1 91.05 ? C9 EPE 203 A 1 HETATM 11 C C10 EPE . . . D 3 13.285 25.232 1.72 1 82.98 ? C10 EPE 203 A 1 HETATM 12 S S EPE . . . D 3 11.621 25.406 1.682 1 91.46 ? S EPE 203 A 1 HETATM 13 O O1S EPE . . . D 3 11.084 25.274 0.261 1 58.71 ? O1S EPE 203 A 1 HETATM 14 O O2S EPE . . . D 3 11.416 26.787 2.252 1 54.98 ? O2S EPE 203 A 1 HETATM 15 O O3S EPE . . . D 3 10.896 24.312 2.465 1 69.91 ? O3S EPE 203 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #