data_6HSX # _model_server_result.job_id T6IJz1bNuqOMs5mwF8mXMw _model_server_result.datetime_utc '2024-11-26 04:38:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hsx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 6HSX # _exptl.entry_id 6HSX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.353 _cell.angle_gamma 90 _cell.entry_id 6HSX _cell.length_a 69.997 _cell.length_b 71.726 _cell.length_c 72.634 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? covale ? covale1 B ND2 ASN 53 H ASN 60 1_555 J C1 NAG . H NAG 307 1_555 G ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale2 C C GLU 8 I GLU 562 1_555 C N TYS 9 I TYS 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 C C TYS 9 I TYS 563 1_555 C N LEU 10 I LEU 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 B O LYS 174 H LYS 169 1_555 H NA NA . H NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc2 B O THR 177 H THR 172 1_555 H NA NA . H NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc3 B O PHE 215 H PHE 204 1_555 H NA NA . H NA 305 4_556 A ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc4 B O ARG 233 H ARG 221 1_555 I NA NA . H NA 306 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc5 B O LYS 236 H LYS 224 1_555 I NA NA . H NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc6 H NA NA . H NA 305 1_555 N O HOH . H HOH 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc7 H NA NA . H NA 305 1_555 N O HOH . H HOH 473 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc8 H NA NA . H NA 305 1_555 N O HOH . H HOH 570 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc9 I NA NA . H NA 306 1_555 N O HOH . H HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc10 I NA NA . H NA 306 1_555 N O HOH . H HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc11 I NA NA . H NA 306 1_555 N O HOH . H HOH 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc12 I NA NA . H NA 306 1_555 N O HOH . H HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6HSX _atom_sites.fract_transf_matrix[1][1] 0.014286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00261 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DMS H 1 301 1 DMS DMS . E 4 DMS H 1 302 2 DMS DMS . F 5 GOL H 1 303 3 GOL GOL . G 5 GOL H 1 304 4 GOL GOL . H 6 NA H 1 305 5 NA NA . I 6 NA H 1 306 6 NA NA . J 7 NAG H 1 307 7 NAG NAG . K 8 PO4 H 1 308 8 PO4 PO4 . L 9 GOZ H 1 309 1 GOZ 156 . M 10 HOH L 1 101 268 HOH HOH . M 10 HOH L 2 102 81 HOH HOH . M 10 HOH L 3 103 78 HOH HOH . M 10 HOH L 4 104 73 HOH HOH . M 10 HOH L 5 105 328 HOH HOH . M 10 HOH L 6 106 34 HOH HOH . M 10 HOH L 7 107 264 HOH HOH . M 10 HOH L 8 108 197 HOH HOH . M 10 HOH L 9 109 96 HOH HOH . M 10 HOH L 10 110 32 HOH HOH . M 10 HOH L 11 111 104 HOH HOH . M 10 HOH L 12 112 26 HOH HOH . M 10 HOH L 13 113 83 HOH HOH . M 10 HOH L 14 114 31 HOH HOH . M 10 HOH L 15 115 286 HOH HOH . M 10 HOH L 16 116 316 HOH HOH . M 10 HOH L 17 117 87 HOH HOH . M 10 HOH L 18 118 82 HOH HOH . M 10 HOH L 19 119 76 HOH HOH . M 10 HOH L 20 120 265 HOH HOH . M 10 HOH L 21 121 330 HOH HOH . M 10 HOH L 22 122 145 HOH HOH . M 10 HOH L 23 123 274 HOH HOH . N 10 HOH H 1 401 201 HOH HOH . N 10 HOH H 2 402 334 HOH HOH . N 10 HOH H 3 403 110 HOH HOH . N 10 HOH H 4 404 321 HOH HOH . N 10 HOH H 5 405 287 HOH HOH . N 10 HOH H 6 406 337 HOH HOH . N 10 HOH H 7 407 42 HOH HOH . N 10 HOH H 8 408 13 HOH HOH . N 10 HOH H 9 409 185 HOH HOH . N 10 HOH H 10 410 91 HOH HOH . N 10 HOH H 11 411 252 HOH HOH . N 10 HOH H 12 412 214 HOH HOH . N 10 HOH H 13 413 70 HOH HOH . N 10 HOH H 14 414 336 HOH HOH . N 10 HOH H 15 415 58 HOH HOH . N 10 HOH H 16 416 84 HOH HOH . N 10 HOH H 17 417 331 HOH HOH . N 10 HOH H 18 418 179 HOH HOH . N 10 HOH H 19 419 199 HOH HOH . N 10 HOH H 20 420 45 HOH HOH . N 10 HOH H 21 421 223 HOH HOH . N 10 HOH H 22 422 93 HOH HOH . N 10 HOH H 23 423 92 HOH HOH . N 10 HOH H 24 424 111 HOH HOH . N 10 HOH H 25 425 29 HOH HOH . N 10 HOH H 26 426 294 HOH HOH . N 10 HOH H 27 427 44 HOH HOH . N 10 HOH H 28 428 134 HOH HOH . N 10 HOH H 29 429 4 HOH HOH . N 10 HOH H 30 430 97 HOH HOH . N 10 HOH H 31 431 284 HOH HOH . N 10 HOH H 32 432 94 HOH HOH . N 10 HOH H 33 433 312 HOH HOH . N 10 HOH H 34 434 107 HOH HOH . N 10 HOH H 35 435 102 HOH HOH . N 10 HOH H 36 436 35 HOH HOH . N 10 HOH H 37 437 80 HOH HOH . N 10 HOH H 38 438 22 HOH HOH . N 10 HOH H 39 439 325 HOH HOH . N 10 HOH H 40 440 136 HOH HOH . N 10 HOH H 41 441 99 HOH HOH . N 10 HOH H 42 442 139 HOH HOH . N 10 HOH H 43 443 61 HOH HOH . N 10 HOH H 44 444 47 HOH HOH . N 10 HOH H 45 445 137 HOH HOH . N 10 HOH H 46 446 16 HOH HOH . N 10 HOH H 47 447 11 HOH HOH . N 10 HOH H 48 448 169 HOH HOH . N 10 HOH H 49 449 57 HOH HOH . N 10 HOH H 50 450 217 HOH HOH . N 10 HOH H 51 451 159 HOH HOH . N 10 HOH H 52 452 168 HOH HOH . N 10 HOH H 53 453 53 HOH HOH . N 10 HOH H 54 454 54 HOH HOH . N 10 HOH H 55 455 272 HOH HOH . N 10 HOH H 56 456 6 HOH HOH . N 10 HOH H 57 457 154 HOH HOH . N 10 HOH H 58 458 9 HOH HOH . N 10 HOH H 59 459 72 HOH HOH . N 10 HOH H 60 460 171 HOH HOH . N 10 HOH H 61 461 86 HOH HOH . N 10 HOH H 62 462 1 HOH HOH . N 10 HOH H 63 463 63 HOH HOH . N 10 HOH H 64 464 37 HOH HOH . N 10 HOH H 65 465 10 HOH HOH . N 10 HOH H 66 466 98 HOH HOH . N 10 HOH H 67 467 43 HOH HOH . N 10 HOH H 68 468 142 HOH HOH . N 10 HOH H 69 469 157 HOH HOH . N 10 HOH H 70 470 56 HOH HOH . N 10 HOH H 71 471 324 HOH HOH . N 10 HOH H 72 472 52 HOH HOH . N 10 HOH H 73 473 103 HOH HOH . N 10 HOH H 74 474 17 HOH HOH . N 10 HOH H 75 475 209 HOH HOH . N 10 HOH H 76 476 59 HOH HOH . N 10 HOH H 77 477 20 HOH HOH . N 10 HOH H 78 478 148 HOH HOH . N 10 HOH H 79 479 67 HOH HOH . N 10 HOH H 80 480 30 HOH HOH . N 10 HOH H 81 481 106 HOH HOH . N 10 HOH H 82 482 172 HOH HOH . N 10 HOH H 83 483 292 HOH HOH . N 10 HOH H 84 484 68 HOH HOH . N 10 HOH H 85 485 41 HOH HOH . N 10 HOH H 86 486 50 HOH HOH . N 10 HOH H 87 487 7 HOH HOH . N 10 HOH H 88 488 271 HOH HOH . N 10 HOH H 89 489 224 HOH HOH . N 10 HOH H 90 490 133 HOH HOH . N 10 HOH H 91 491 15 HOH HOH . N 10 HOH H 92 492 27 HOH HOH . N 10 HOH H 93 493 23 HOH HOH . N 10 HOH H 94 494 295 HOH HOH . N 10 HOH H 95 495 333 HOH HOH . N 10 HOH H 96 496 204 HOH HOH . N 10 HOH H 97 497 164 HOH HOH . N 10 HOH H 98 498 12 HOH HOH . N 10 HOH H 99 499 225 HOH HOH . N 10 HOH H 100 500 55 HOH HOH . N 10 HOH H 101 501 71 HOH HOH . N 10 HOH H 102 502 69 HOH HOH . N 10 HOH H 103 503 62 HOH HOH . N 10 HOH H 104 504 173 HOH HOH . N 10 HOH H 105 505 146 HOH HOH . N 10 HOH H 106 506 2 HOH HOH . N 10 HOH H 107 507 24 HOH HOH . N 10 HOH H 108 508 5 HOH HOH . N 10 HOH H 109 509 161 HOH HOH . N 10 HOH H 110 510 95 HOH HOH . N 10 HOH H 111 511 36 HOH HOH . N 10 HOH H 112 512 263 HOH HOH . N 10 HOH H 113 513 25 HOH HOH . N 10 HOH H 114 514 8 HOH HOH . N 10 HOH H 115 515 14 HOH HOH . N 10 HOH H 116 516 258 HOH HOH . N 10 HOH H 117 517 40 HOH HOH . N 10 HOH H 118 518 242 HOH HOH . N 10 HOH H 119 519 327 HOH HOH . N 10 HOH H 120 520 193 HOH HOH . N 10 HOH H 121 521 155 HOH HOH . N 10 HOH H 122 522 184 HOH HOH . N 10 HOH H 123 523 33 HOH HOH . N 10 HOH H 124 524 144 HOH HOH . N 10 HOH H 125 525 212 HOH HOH . N 10 HOH H 126 526 273 HOH HOH . N 10 HOH H 127 527 262 HOH HOH . N 10 HOH H 128 528 181 HOH HOH . N 10 HOH H 129 529 46 HOH HOH . N 10 HOH H 130 530 183 HOH HOH . N 10 HOH H 131 531 19 HOH HOH . N 10 HOH H 132 532 49 HOH HOH . N 10 HOH H 133 533 188 HOH HOH . N 10 HOH H 134 534 109 HOH HOH . N 10 HOH H 135 535 254 HOH HOH . N 10 HOH H 136 536 21 HOH HOH . N 10 HOH H 137 537 28 HOH HOH . N 10 HOH H 138 538 140 HOH HOH . N 10 HOH H 139 539 335 HOH HOH . N 10 HOH H 140 540 239 HOH HOH . N 10 HOH H 141 541 75 HOH HOH . N 10 HOH H 142 542 141 HOH HOH . N 10 HOH H 143 543 203 HOH HOH . N 10 HOH H 144 544 180 HOH HOH . N 10 HOH H 145 545 190 HOH HOH . N 10 HOH H 146 546 314 HOH HOH . N 10 HOH H 147 547 233 HOH HOH . N 10 HOH H 148 548 288 HOH HOH . N 10 HOH H 149 549 228 HOH HOH . N 10 HOH H 150 550 317 HOH HOH . N 10 HOH H 151 551 147 HOH HOH . N 10 HOH H 152 552 65 HOH HOH . N 10 HOH H 153 553 178 HOH HOH . N 10 HOH H 154 554 88 HOH HOH . N 10 HOH H 155 555 3 HOH HOH . N 10 HOH H 156 556 150 HOH HOH . N 10 HOH H 157 557 143 HOH HOH . N 10 HOH H 158 558 332 HOH HOH . N 10 HOH H 159 559 48 HOH HOH . N 10 HOH H 160 560 207 HOH HOH . N 10 HOH H 161 561 245 HOH HOH . N 10 HOH H 162 562 205 HOH HOH . N 10 HOH H 163 563 192 HOH HOH . N 10 HOH H 164 564 322 HOH HOH . N 10 HOH H 165 565 182 HOH HOH . N 10 HOH H 166 566 251 HOH HOH . N 10 HOH H 167 567 256 HOH HOH . N 10 HOH H 168 568 108 HOH HOH . N 10 HOH H 169 569 124 HOH HOH . N 10 HOH H 170 570 160 HOH HOH . N 10 HOH H 171 571 170 HOH HOH . N 10 HOH H 172 572 74 HOH HOH . N 10 HOH H 173 573 149 HOH HOH . N 10 HOH H 174 574 195 HOH HOH . N 10 HOH H 175 575 175 HOH HOH . N 10 HOH H 176 576 152 HOH HOH . N 10 HOH H 177 577 174 HOH HOH . N 10 HOH H 178 578 275 HOH HOH . N 10 HOH H 179 579 163 HOH HOH . N 10 HOH H 180 580 293 HOH HOH . N 10 HOH H 181 581 211 HOH HOH . N 10 HOH H 182 582 79 HOH HOH . N 10 HOH H 183 583 135 HOH HOH . N 10 HOH H 184 584 243 HOH HOH . N 10 HOH H 185 585 232 HOH HOH . N 10 HOH H 186 586 60 HOH HOH . N 10 HOH H 187 587 291 HOH HOH . N 10 HOH H 188 588 248 HOH HOH . N 10 HOH H 189 589 319 HOH HOH . N 10 HOH H 190 590 307 HOH HOH . N 10 HOH H 191 591 234 HOH HOH . N 10 HOH H 192 592 240 HOH HOH . N 10 HOH H 193 593 153 HOH HOH . N 10 HOH H 194 594 85 HOH HOH . N 10 HOH H 195 595 241 HOH HOH . N 10 HOH H 196 596 310 HOH HOH . N 10 HOH H 197 597 309 HOH HOH . N 10 HOH H 198 598 156 HOH HOH . N 10 HOH H 199 599 236 HOH HOH . N 10 HOH H 200 600 235 HOH HOH . O 10 HOH I 1 601 202 HOH HOH . O 10 HOH I 2 602 285 HOH HOH . O 10 HOH I 3 603 308 HOH HOH . O 10 HOH I 4 604 326 HOH HOH . O 10 HOH I 5 605 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 4 11.202 15.737 36.545 1 54.23 ? S DMS 302 H 1 HETATM 2 O O DMS . . . E 4 11.192 14.579 35.592 1 44.42 ? O DMS 302 H 1 HETATM 3 C C1 DMS . . . E 4 10.7 17.235 35.672 1 36.66 ? C1 DMS 302 H 1 HETATM 4 C C2 DMS . . . E 4 9.88 15.59 37.771 1 42.76 ? C2 DMS 302 H 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #