data_6HT6 # _model_server_result.job_id ILzsRo92iuUGdfICa7901Q _model_server_result.datetime_utc '2024-11-24 08:54:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ht6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6HT6 # _exptl.entry_id 6HT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 214.217 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2,4-bis(oxidanyl)phenyl]-phenyl-methanone' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HT6 _cell.length_a 58.999 _cell.length_b 93.128 _cell.length_c 95.548 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 69 A ASP 69 1_555 D MG MG . B MG 301 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc2 A OD2 ASP 69 A ASP 69 1_555 D MG MG . B MG 301 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.713 ? metalc ? metalc3 B OD2 ASP 125 B ASP 125 1_555 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc4 B OE1 GLU 131 B GLU 131 1_555 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? # _chem_comp.formula 'C13 H10 O3' _chem_comp.formula_weight 214.217 _chem_comp.id CUT _chem_comp.mon_nstd_flag . _chem_comp.name '[2,4-bis(oxidanyl)phenyl]-phenyl-methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C12 CUT sing 70 n n C12 C13 CUT doub 71 n y C12 C11 CUT sing 72 n y C13 C14 CUT sing 73 n y C11 C10 CUT doub 74 n y C14 C09 CUT doub 75 n y C10 C09 CUT sing 76 n y C10 O16 CUT sing 77 n n C09 C07 CUT sing 78 n n C06 C05 CUT doub 79 n y C06 C01 CUT sing 80 n y C05 C04 CUT sing 81 n y C01 C02 CUT doub 82 n y C07 C04 CUT sing 83 n n C07 O08 CUT doub 84 n n C04 C03 CUT doub 85 n y C02 C03 CUT sing 86 n y C13 H131 CUT sing 87 n n C01 H011 CUT sing 88 n n C02 H021 CUT sing 89 n n C03 H031 CUT sing 90 n n C05 H051 CUT sing 91 n n C06 H061 CUT sing 92 n n C11 H111 CUT sing 93 n n C14 H141 CUT sing 94 n n O15 H151 CUT sing 95 n n O16 H161 CUT sing 96 n n # _atom_sites.entry_id 6HT6 _atom_sites.fract_transf_matrix[1][1] 0.016949 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CUT A 1 301 1 CUT LIG . D 3 MG B 1 301 1 MG MG . E 2 CUT B 1 302 2 CUT LIG . F 4 HOH A 1 401 8 HOH HOH . F 4 HOH A 2 402 11 HOH HOH . F 4 HOH A 3 403 17 HOH HOH . F 4 HOH A 4 404 10 HOH HOH . F 4 HOH A 5 405 9 HOH HOH . F 4 HOH A 6 406 13 HOH HOH . F 4 HOH A 7 407 18 HOH HOH . F 4 HOH A 8 408 6 HOH HOH . F 4 HOH A 9 409 1 HOH HOH . F 4 HOH A 10 410 5 HOH HOH . G 4 HOH B 1 401 15 HOH HOH . G 4 HOH B 2 402 12 HOH HOH . G 4 HOH B 3 403 4 HOH HOH . G 4 HOH B 4 404 16 HOH HOH . G 4 HOH B 5 405 19 HOH HOH . G 4 HOH B 6 406 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 CUT . . . C 2 -11.096 2.464 -3.985 1 39.73 ? C10 CUT 301 A 1 HETATM 2 C C13 CUT . . . C 2 -11.124 4.411 -5.967 1 40.47 ? C13 CUT 301 A 1 HETATM 3 C C01 CUT . . . C 2 -4.826 3.707 -4.405 1 37.39 ? C01 CUT 301 A 1 HETATM 4 C C02 CUT . . . C 2 -4.942 2.331 -4.285 1 37.61 ? C02 CUT 301 A 1 HETATM 5 C C03 CUT . . . C 2 -6.19 1.721 -4.292 1 33.34 ? C03 CUT 301 A 1 HETATM 6 C C04 CUT . . . C 2 -7.337 2.482 -4.437 1 41.17 ? C04 CUT 301 A 1 HETATM 7 C C05 CUT . . . C 2 -7.206 3.87 -4.545 1 43.69 ? C05 CUT 301 A 1 HETATM 8 C C06 CUT . . . C 2 -5.964 4.465 -4.532 1 38.05 ? C06 CUT 301 A 1 HETATM 9 C C07 CUT . . . C 2 -8.726 1.805 -4.482 1 34.58 ? C07 CUT 301 A 1 HETATM 10 O O08 CUT . . . C 2 -8.842 0.64 -4.299 1 36.54 ? O08 CUT 301 A 1 HETATM 11 C C09 CUT . . . C 2 -9.973 2.655 -4.757 1 35.51 ? C09 CUT 301 A 1 HETATM 12 C C11 CUT . . . C 2 -12.231 3.23 -4.179 1 45.43 ? C11 CUT 301 A 1 HETATM 13 C C12 CUT . . . C 2 -12.245 4.198 -5.17 1 49.8 ? C12 CUT 301 A 1 HETATM 14 C C14 CUT . . . C 2 -9.99 3.635 -5.747 1 41.62 ? C14 CUT 301 A 1 HETATM 15 O O15 CUT . . . C 2 -13.411 4.942 -5.352 1 49.51 ? O15 CUT 301 A 1 HETATM 16 O O16 CUT . . . C 2 -11.07 1.495 -2.988 1 54.19 ? O16 CUT 301 A 1 HETATM 17 H H131 CUT . . . C 2 -11.131 5.061 -6.632 1 48.57 ? H131 CUT 301 A 1 HETATM 18 H H011 CUT . . . C 2 -3.99 4.114 -4.379 1 44.87 ? H011 CUT 301 A 1 HETATM 19 H H021 CUT . . . C 2 -4.176 1.812 -4.189 1 45.13 ? H021 CUT 301 A 1 HETATM 20 H H031 CUT . . . C 2 -6.254 0.795 -4.228 1 40.01 ? H031 CUT 301 A 1 HETATM 21 H H051 CUT . . . C 2 -7.966 4.396 -4.648 1 52.43 ? H051 CUT 301 A 1 HETATM 22 H H061 CUT . . . C 2 -5.895 5.389 -4.607 1 45.66 ? H061 CUT 301 A 1 HETATM 23 H H111 CUT . . . C 2 -12.986 3.087 -3.656 1 54.51 ? H111 CUT 301 A 1 HETATM 24 H H141 CUT . . . C 2 -9.232 3.772 -6.269 1 49.94 ? H141 CUT 301 A 1 HETATM 25 H H151 CUT . . . C 2 -14.087 4.434 -5.272 1 59.41 ? H151 CUT 301 A 1 HETATM 26 H H161 CUT . . . C 2 -10.737 0.777 -3.3 1 65.03 ? H161 CUT 301 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #