data_6HUK # _model_server_result.job_id 8bJ5ATrXSBRfBXofn0g8EQ _model_server_result.datetime_utc '2024-10-15 11:23:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6huk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":501}' # _entry.id 6HUK # _exptl.entry_id 6HUK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 367.352 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'bicuculline methochloride' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HUK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 N N N ? 9 Q N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 5 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 5 4 3 MAN BMA C1 O1 . O6 HO6 . sing 4 ? 5 5 4 MAN MAN C1 O1 . O3 HO3 . sing 5 ? 5 6 4 MAN MAN C1 O1 . O6 HO6 . sing 6 ? 5 7 3 MAN BMA C1 O1 . O3 HO3 . sing 7 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 8 ? 7 2 1 NAG NAG C1 O1 . O4 HO4 . sing 9 ? 7 3 2 BMA NAG C1 O1 . O4 HO4 . sing 10 ? 7 4 3 MAN BMA C1 O1 . O6 HO6 . sing 11 ? 7 5 4 MAN MAN C1 O1 . O3 HO3 . sing 12 ? 7 6 3 MAN BMA C1 O1 . O3 HO3 . sing 13 ? 8 2 1 NAG NAG C1 O1 . O4 HO4 . sing 14 ? 8 3 2 BMA NAG C1 O1 . O4 HO4 . sing 15 ? 8 4 3 MAN BMA C1 O1 . O3 HO3 . sing 16 ? 8 5 3 MAN BMA C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 5 n G NAG 1 F 1 NAG R 3000 NAG 5 n G NAG 2 F 2 NAG R 3001 NAG 5 n G BMA 3 F 3 BMA R 3002 BMA 5 n G MAN 4 F 4 MAN R 3003 MAN 5 n G MAN 5 F 5 MAN R 3006 MAN 5 n G MAN 6 F 6 MAN R 3004 MAN 5 n G MAN 7 F 7 MAN R 3008 MAN 6 n H NAG 1 H 1 NAG O 2000 NAG 6 n H NAG 2 H 2 NAG O 2001 NAG 7 n I NAG 1 I 1 NAG S 3000 NAG 7 n I NAG 2 I 2 NAG S 3001 NAG 7 n I BMA 3 I 3 BMA S 3002 BMA 7 n I MAN 4 I 4 MAN S 3003 MAN 7 n I MAN 5 I 5 MAN S 3005 MAN 7 n I MAN 6 I 6 MAN S 3004 MAN 6 n J NAG 1 J 1 NAG T 3000 NAG 6 n J NAG 2 J 2 NAG T 3001 NAG 8 n K NAG 1 K 1 NAG U 3000 NAG 8 n K NAG 2 K 2 NAG U 3001 NAG 8 n K BMA 3 K 3 BMA U 3002 BMA 8 n K MAN 4 K 4 MAN U 3008 MAN 8 n K MAN 5 K 5 MAN U 3003 MAN 6 n L NAG 1 L 1 NAG P 2000 NAG 6 n L NAG 2 L 2 NAG P 2001 NAG 7 n M NAG 1 M 1 NAG V 3000 NAG 7 n M NAG 2 M 2 NAG V 3001 NAG 7 n M BMA 3 M 3 BMA V 3002 BMA 7 n M MAN 4 M 4 MAN V 3003 MAN 7 n M MAN 5 M 5 MAN V 3005 MAN 7 n M MAN 6 M 6 MAN V 3004 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 174 A CYS 139 1_555 A SG CYS 188 A CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 161 B CYS 136 1_555 B SG CYS 175 B CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 C SG CYS 190 C CYS 151 1_555 C SG CYS 204 C CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 174 D CYS 139 1_555 D SG CYS 188 D CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 E SG CYS 161 E CYS 136 1_555 E SG CYS 175 E CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf6 F SG CYS 428 G CYS 428 1_555 F SG CYS 501 G CYS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 146 A ASN 111 1_555 G C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale2 A CD2 LEU 430 A LEU 395 1_555 O C6A PIO . A PIO 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale3 B ND2 ASN 105 B ASN 80 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 B ND2 ASN 174 B ASN 149 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale5 C ND2 ASN 247 C ASN 208 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale6 D ND2 ASN 146 D ASN 111 1_555 K C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale7 E ND2 ASN 105 E ASN 80 1_555 L C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale8 E ND2 ASN 174 E ASN 149 1_555 M C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale9 G O4 NAG . F NAG 1 1_555 G C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale10 G O4 NAG . F NAG 2 1_555 G C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale11 G O6 BMA . F BMA 3 1_555 G C1 MAN . F MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale12 G O3 BMA . F BMA 3 1_555 G C1 MAN . F MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale13 G O3 MAN . F MAN 4 1_555 G C1 MAN . F MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale14 G O6 MAN . F MAN 4 1_555 G C1 MAN . F MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale15 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale16 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale17 I O4 NAG . I NAG 2 1_555 I C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale18 I O6 BMA . I BMA 3 1_555 I C1 MAN . I MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale19 I O3 BMA . I BMA 3 1_555 I C1 MAN . I MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale20 I O3 MAN . I MAN 4 1_555 I C1 MAN . I MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale21 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale22 K O4 NAG . K NAG 1 1_555 K C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale23 K O4 NAG . K NAG 2 1_555 K C1 BMA . K BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale24 K O3 BMA . K BMA 3 1_555 K C1 MAN . K MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale25 K O6 BMA . K BMA 3 1_555 K C1 MAN . K MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale26 L O4 NAG . L NAG 1 1_555 L C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale27 M O4 NAG . M NAG 1 1_555 M C1 NAG . M NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale28 M O4 NAG . M NAG 2 1_555 M C1 BMA . M BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale29 M O6 BMA . M BMA 3 1_555 M C1 MAN . M MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale30 M O3 BMA . M BMA 3 1_555 M C1 MAN . M MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale31 M O3 MAN . M MAN 4 1_555 M C1 MAN . M MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? # _chem_comp.formula 'C20 H17 N O6' _chem_comp.formula_weight 367.352 _chem_comp.id H0Z _chem_comp.mon_nstd_flag . _chem_comp.name 'bicuculline methochloride' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6HUK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code N 9 H0Z A 1 501 1 H0Z BCC . O 10 PIO A 1 502 1 PIO PIO . P 10 PIO D 1 501 1 PIO PIO . Q 9 H0Z E 1 501 1 H0Z BCC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 H0Z . . . N 9 143.235 132.527 148.501 1 45.49 ? C01 H0Z 501 A 1 HETATM 2 N N02 H0Z . . . N 9 144.337 133.458 148.27 1 45.49 ? N02 H0Z 501 A 1 HETATM 3 C C04 H0Z . . . N 9 144.595 134.269 149.461 1 45.49 ? C04 H0Z 501 A 1 HETATM 4 C C05 H0Z . . . N 9 143.454 135.219 149.747 1 45.49 ? C05 H0Z 501 A 1 HETATM 5 C C06 H0Z . . . N 9 143.097 136.021 148.522 1 45.49 ? C06 H0Z 501 A 1 HETATM 6 C C07 H0Z . . . N 9 143.368 135.53 147.236 1 45.49 ? C07 H0Z 501 A 1 HETATM 7 C C08 H0Z . . . N 9 142.953 136.255 146.116 1 45.49 ? C08 H0Z 501 A 1 HETATM 8 C C09 H0Z . . . N 9 142.319 137.46 146.304 1 45.49 ? C09 H0Z 501 A 1 HETATM 9 O O10 H0Z . . . N 9 141.871 138.348 145.353 1 45.49 ? O10 H0Z 501 A 1 HETATM 10 C C11 H0Z . . . N 9 141.289 139.429 146.081 1 45.49 ? C11 H0Z 501 A 1 HETATM 11 O O12 H0Z . . . N 9 141.441 139.164 147.476 1 45.49 ? O12 H0Z 501 A 1 HETATM 12 C C13 H0Z . . . N 9 142.077 137.946 147.555 1 45.49 ? C13 H0Z 501 A 1 HETATM 13 C C14 H0Z . . . N 9 142.45 137.246 148.678 1 45.49 ? C14 H0Z 501 A 1 HETATM 14 C C15 H0Z . . . N 9 144.146 134.241 147.035 1 45.49 ? C15 H0Z 501 A 1 HETATM 15 C C16 H0Z . . . N 9 145.523 134.536 146.396 1 45.49 ? C16 H0Z 501 A 1 HETATM 16 O O17 H0Z . . . N 9 145.988 135.838 146.872 1 45.49 ? O17 H0Z 501 A 1 HETATM 17 C C18 H0Z . . . N 9 146.347 136.64 145.836 1 45.49 ? C18 H0Z 501 A 1 HETATM 18 O O19 H0Z . . . N 9 146.772 137.751 146.022 1 45.49 ? O19 H0Z 501 A 1 HETATM 19 C C20 H0Z . . . N 9 146.117 135.905 144.586 1 45.49 ? C20 H0Z 501 A 1 HETATM 20 C C21 H0Z . . . N 9 146.331 136.247 143.254 1 45.49 ? C21 H0Z 501 A 1 HETATM 21 O O22 H0Z . . . N 9 146.884 137.39 142.72 1 45.49 ? O22 H0Z 501 A 1 HETATM 22 C C23 H0Z . . . N 9 146.878 137.186 141.306 1 45.49 ? C23 H0Z 501 A 1 HETATM 23 O O24 H0Z . . . N 9 146.313 135.902 141.031 1 45.49 ? O24 H0Z 501 A 1 HETATM 24 C C25 H0Z . . . N 9 145.994 135.364 142.256 1 45.49 ? C25 H0Z 501 A 1 HETATM 25 C C26 H0Z . . . N 9 145.439 134.128 142.539 1 45.49 ? C26 H0Z 501 A 1 HETATM 26 C C27 H0Z . . . N 9 145.241 133.789 143.868 1 45.49 ? C27 H0Z 501 A 1 HETATM 27 C C28 H0Z . . . N 9 145.582 134.663 144.896 1 45.49 ? C28 H0Z 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #