data_6HUO # _model_server_result.job_id AQ4xv6zIW8c8xCxcoDOrVQ _model_server_result.datetime_utc '2024-11-19 09:50:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6huo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":501}' # _entry.id 6HUO # _exptl.entry_id 6HUO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 308.765 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-chloro-1-methyl-6-phenyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HUO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 5 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 5 4 3 MAN BMA C1 O1 . O6 HO6 . sing 4 ? 5 5 4 MAN MAN C1 O1 . O3 HO3 . sing 5 ? 5 6 4 MAN MAN C1 O1 . O6 HO6 . sing 6 ? 5 7 3 MAN BMA C1 O1 . O3 HO3 . sing 7 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 8 ? 7 2 1 NAG NAG C1 O1 . O4 HO4 . sing 9 ? 7 3 2 BMA NAG C1 O1 . O4 HO4 . sing 10 ? 7 4 3 MAN BMA C1 O1 . O6 HO6 . sing 11 ? 7 5 4 MAN MAN C1 O1 . O3 HO3 . sing 12 ? 7 6 3 MAN BMA C1 O1 . O3 HO3 . sing 13 ? 8 2 1 NAG NAG C1 O1 . O4 HO4 . sing 14 ? 8 3 2 BMA NAG C1 O1 . O4 HO4 . sing 15 ? 8 4 3 MAN BMA C1 O1 . O3 HO3 . sing 16 ? 8 5 3 MAN BMA C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 5 n G NAG 1 F 1 NAG R 3000 NAG 5 n G NAG 2 F 2 NAG R 3001 NAG 5 n G BMA 3 F 3 BMA R 3002 BMA 5 n G MAN 4 F 4 MAN R 3003 MAN 5 n G MAN 5 F 5 MAN R 3006 MAN 5 n G MAN 6 F 6 MAN R 3004 MAN 5 n G MAN 7 F 7 MAN R 3008 MAN 6 n H NAG 1 H 1 NAG O 2000 NAG 6 n H NAG 2 H 2 NAG O 2001 NAG 7 n I NAG 1 I 1 NAG S 3000 NAG 7 n I NAG 2 I 2 NAG S 3001 NAG 7 n I BMA 3 I 3 BMA S 3002 BMA 7 n I MAN 4 I 4 MAN S 3003 MAN 7 n I MAN 5 I 5 MAN S 3005 MAN 7 n I MAN 6 I 6 MAN S 3004 MAN 6 n J NAG 1 J 1 NAG T 3000 NAG 6 n J NAG 2 J 2 NAG T 3001 NAG 8 n K NAG 1 K 1 NAG U 3000 NAG 8 n K NAG 2 K 2 NAG U 3001 NAG 8 n K BMA 3 K 3 BMA U 3002 BMA 8 n K MAN 4 K 4 MAN U 3008 MAN 8 n K MAN 5 K 5 MAN U 3003 MAN 6 n L NAG 1 L 1 NAG P 2000 NAG 6 n L NAG 2 L 2 NAG P 2001 NAG 7 n M NAG 1 M 1 NAG V 3000 NAG 7 n M NAG 2 M 2 NAG V 3001 NAG 7 n M BMA 3 M 3 BMA V 3002 BMA 7 n M MAN 4 M 4 MAN V 3003 MAN 7 n M MAN 5 M 5 MAN V 3005 MAN 7 n M MAN 6 M 6 MAN V 3004 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 174 A CYS 139 1_555 A SG CYS 188 A CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 161 B CYS 136 1_555 B SG CYS 175 B CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 C SG CYS 190 C CYS 151 1_555 C SG CYS 204 C CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 D SG CYS 174 D CYS 139 1_555 D SG CYS 188 D CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 E SG CYS 161 E CYS 136 1_555 E SG CYS 175 E CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 F SG CYS 428 G CYS 428 1_555 F SG CYS 501 G CYS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A ND2 ASN 146 A ASN 111 1_555 G C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.481 ? covale ? covale2 B ND2 ASN 105 B ASN 80 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 B ND2 ASN 174 B ASN 149 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 C ND2 ASN 247 C ASN 208 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale5 D ND2 ASN 146 D ASN 111 1_555 K C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale6 E ND2 ASN 105 E ASN 80 1_555 L C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale7 E ND2 ASN 174 E ASN 149 1_555 M C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale8 G O4 NAG . F NAG 1 1_555 G C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale9 G O4 NAG . F NAG 2 1_555 G C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale10 G O6 BMA . F BMA 3 1_555 G C1 MAN . F MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.108 ? covale ? covale11 G O3 BMA . F BMA 3 1_555 G C1 MAN . F MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale12 G O3 MAN . F MAN 4 1_555 G C1 MAN . F MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale13 G O6 MAN . F MAN 4 1_555 G C1 MAN . F MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale14 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale15 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale16 I O4 NAG . I NAG 2 1_555 I C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale17 I O6 BMA . I BMA 3 1_555 I C1 MAN . I MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale18 I O3 BMA . I BMA 3 1_555 I C1 MAN . I MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale19 I O3 MAN . I MAN 4 1_555 I C1 MAN . I MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale20 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale21 K O4 NAG . K NAG 1 1_555 K C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale22 K O4 NAG . K NAG 2 1_555 K C1 BMA . K BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale23 K O3 BMA . K BMA 3 1_555 K C1 MAN . K MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale24 K O6 BMA . K BMA 3 1_555 K C1 MAN . K MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale25 L O4 NAG . L NAG 1 1_555 L C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? covale ? covale26 M O4 NAG . M NAG 1 1_555 M C1 NAG . M NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.385 ? covale ? covale27 M O4 NAG . M NAG 2 1_555 M C1 BMA . M BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale28 M O6 BMA . M BMA 3 1_555 M C1 MAN . M MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale29 M O3 BMA . M BMA 3 1_555 M C1 MAN . M MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale30 M O3 MAN . M MAN 4 1_555 M C1 MAN . M MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? # _chem_comp.formula 'C17 H13 Cl N4' _chem_comp.formula_weight 308.765 _chem_comp.id 08H _chem_comp.mon_nstd_flag . _chem_comp.name 8-chloro-1-methyl-6-phenyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ALPRAZOLAM # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE CAC 08H doub 1 n y CAE CAG 08H sing 2 n y CAC CAD 08H sing 3 n y CAG CAQ 08H doub 4 n y CAD CAF 08H doub 5 n y CAQ CAF 08H sing 6 n y CAQ CAO 08H sing 7 n n NAL CAO 08H doub 8 n n NAL CAK 08H sing 9 n n CAO CAS 08H sing 10 n n CAK CAT 08H sing 11 n n CAS CAJ 08H doub 12 n y CAS CAU 08H sing 13 n y CAJ CAP 08H sing 14 n y CAT NAN 08H doub 15 n y CAT NAV 08H sing 16 n y NAN NAM 08H sing 17 n y NAV CAU 08H sing 18 n n NAV CAR 08H sing 19 n y CAU CAI 08H doub 20 n y CAP CLAB 08H sing 21 n n CAP CAH 08H doub 22 n y NAM CAR 08H doub 23 n y CAR CAA 08H sing 24 n n CAI CAH 08H sing 25 n y CAJ H1 08H sing 26 n n CAH H2 08H sing 27 n n CAI H3 08H sing 28 n n CAA H4 08H sing 29 n n CAA H5 08H sing 30 n n CAA H6 08H sing 31 n n CAK H7 08H sing 32 n n CAK H8 08H sing 33 n n CAF H12 08H sing 34 n n CAD H13 08H sing 35 n n CAC H14 08H sing 36 n n CAE H15 08H sing 37 n n CAG H16 08H sing 38 n n # _atom_sites.entry_id 6HUO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code N 9 ABU A 1 501 1 ABU ABU . O 10 PIO A 1 502 1 PIO PIO . P 11 08H D 1 501 1 08H 08H . Q 10 PIO D 1 502 1 PIO PIO . R 9 ABU E 1 501 1 ABU ABU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAS 08H . . . P 11 153.424 162.331 160.327 1 36.61 ? CAS 08H 501 D 1 HETATM 2 C CAJ 08H . . . P 11 153.325 160.973 160.025 1 36.61 ? CAJ 08H 501 D 1 HETATM 3 C CAP 08H . . . P 11 153.653 160.525 158.765 1 36.61 ? CAP 08H 501 D 1 HETATM 4 CL CLAB 08H . . . P 11 153.506 158.828 158.408 1 36.61 ? CLAB 08H 501 D 1 HETATM 5 C CAH 08H . . . P 11 154.084 161.383 157.782 1 36.61 ? CAH 08H 501 D 1 HETATM 6 C CAI 08H . . . P 11 154.186 162.733 158.062 1 36.61 ? CAI 08H 501 D 1 HETATM 7 C CAU 08H . . . P 11 153.857 163.215 159.324 1 36.61 ? CAU 08H 501 D 1 HETATM 8 N NAV 08H . . . P 11 153.937 164.623 159.57 1 36.61 ? NAV 08H 501 D 1 HETATM 9 C CAR 08H . . . P 11 154.863 165.557 159.159 1 36.61 ? CAR 08H 501 D 1 HETATM 10 C CAA 08H . . . P 11 156.06 165.251 158.338 1 36.61 ? CAA 08H 501 D 1 HETATM 11 N NAM 08H . . . P 11 154.512 166.738 159.601 1 36.61 ? NAM 08H 501 D 1 HETATM 12 N NAN 08H . . . P 11 153.327 166.594 160.324 1 36.61 ? NAN 08H 501 D 1 HETATM 13 C CAT 08H . . . P 11 153.01 165.325 160.29 1 36.61 ? CAT 08H 501 D 1 HETATM 14 C CAK 08H . . . P 11 151.862 164.636 160.918 1 36.61 ? CAK 08H 501 D 1 HETATM 15 N NAL 08H . . . P 11 152.374 163.8 162.011 1 36.61 ? NAL 08H 501 D 1 HETATM 16 C CAO 08H . . . P 11 153.081 162.776 161.708 1 36.61 ? CAO 08H 501 D 1 HETATM 17 C CAQ 08H . . . P 11 153.582 161.945 162.838 1 36.61 ? CAQ 08H 501 D 1 HETATM 18 C CAF 08H . . . P 11 154.891 161.48 162.85 1 36.61 ? CAF 08H 501 D 1 HETATM 19 C CAD 08H . . . P 11 155.348 160.698 163.897 1 36.61 ? CAD 08H 501 D 1 HETATM 20 C CAC 08H . . . P 11 154.508 160.373 164.939 1 36.61 ? CAC 08H 501 D 1 HETATM 21 C CAE 08H . . . P 11 153.208 160.831 164.939 1 36.61 ? CAE 08H 501 D 1 HETATM 22 C CAG 08H . . . P 11 152.744 161.614 163.896 1 36.61 ? CAG 08H 501 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #