data_6HV7 # _model_server_result.job_id cRD4A3FZMCGQ0vaOHvsYUQ _model_server_result.datetime_utc '2024-11-04 22:20:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"MA","auth_seq_id":301}' # _entry.id 6HV7 # _exptl.entry_id 6HV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.56 _cell.angle_gamma 90 _cell.entry_id 6HV7 _cell.length_a 134.07 _cell.length_b 302.11 _cell.length_c 143.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 CA N N ? 15 FA N N ? 15 HA N N ? 15 IA N N ? 15 LA N N ? 15 MA N N ? 15 OA N N ? 15 PA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 H OG1 THR 1 H THR 1 1_555 EA C25 GQQ . H GQQ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 K OG1 THR 1 K THR 1 1_555 GA C25 GQQ . K GQQ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale3 V OG1 THR 1 V THR 1 1_555 KA C25 GQQ . V GQQ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale4 Y OG1 THR 1 Y THR 1 1_555 NA C25 GQQ . Y GQQ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? metalc ? metalc1 G OG1 THR 17 G THR 8 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc2 G O ALA 132 G ALA 123 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc3 G O MET 134 G MET 125 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc4 I O SER 181 I SER 180 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc5 I OXT ASP 205 I ASP 204 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc6 K O ASP 168 K ASP 168 1_555 HA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc7 HA MG MG . K MG 302 1_555 W O ASP 205 W ASP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc8 L OXT ASP 222 L ASP 222 1_555 LA MG MG . V MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc9 N O ILE 163 N ILE 163 1_555 IA MG MG . N MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc10 V O ILE 163 V ILE 163 1_555 LA MG MG . V MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc11 V O ASP 166 V ASP 166 1_555 LA MG MG . V MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc12 V O SER 169 V SER 169 1_555 LA MG MG . V MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc13 W O SER 181 W SER 180 1_555 MA MG MG . W MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.941 ? metalc ? metalc14 W OXT ASP 205 W ASP 204 1_555 MA MG MG . W MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc15 Y O HIS 166 Y HIS 166 1_555 OA MG MG . Y MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc16 Y O ASP 168 Y ASP 168 1_555 OA MG MG . Y MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc17 Z O THR 192 Z THR 192 1_555 PA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc18 Z O VAL 198 Z VAL 198 1_555 PA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6HV7 _atom_sites.fract_transf_matrix[1][1] 0.007459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003099 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 15 MG G 1 301 6 MG MG . DA 16 CL G 1 302 9 CL CL . EA 17 GQQ H 1 301 0 GQQ LIG . FA 15 MG I 1 301 7 MG MG . GA 17 GQQ K 1 301 0 GQQ LIG . HA 15 MG K 1 302 1 MG MG . IA 15 MG N 1 201 5 MG MG . JA 16 CL U 1 301 10 CL CL . KA 17 GQQ V 1 301 0 GQQ LIG . LA 15 MG V 1 302 2 MG MG . MA 15 MG W 1 301 8 MG MG . NA 17 GQQ Y 1 301 0 GQQ LIG . OA 15 MG Y 1 302 4 MG MG . PA 15 MG Z 1 301 3 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id MA _atom_site.label_entity_id 15 _atom_site.Cartn_x 2.889 _atom_site.Cartn_y -150.866 _atom_site.Cartn_z 10.728 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 75.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id W _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 118 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 74 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #