data_6HVD
#
_model_server_result.job_id            BHDxEoJo_UQB4tAmk3BXtQ 
_model_server_result.datetime_utc      '2024-11-27 04:42:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hvd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6HVD 
#
_exptl.entry_id    6HVD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HVD 
_cell.length_a            69.871 
_cell.length_b            69.871 
_cell.length_c            164.301 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HVD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6HVD 
_atom_sites.fract_transf_matrix[1][1]    0.014312 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014312 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006086 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 401 1 EDO EDO . 
C 2 EDO A 1 402 2 EDO EDO . 
D 2 EDO A 1 403 3 EDO EDO . 
E 3 GUQ A 1 404 1 GUQ R69 . 
F 4 SO4 A 1 405 1 SO4 SO4 . 
G 4 SO4 A 1 406 2 SO4 SO4 . 
H 5 HOH A 1 501 146 HOH HOH . 
H 5 HOH A 2 502 158 HOH HOH . 
H 5 HOH A 3 503 170 HOH HOH . 
H 5 HOH A 4 504 133 HOH HOH . 
H 5 HOH A 5 505 149 HOH HOH . 
H 5 HOH A 6 506 161 HOH HOH . 
H 5 HOH A 7 507 218 HOH HOH . 
H 5 HOH A 8 508 24 HOH HOH . 
H 5 HOH A 9 509 112 HOH HOH . 
H 5 HOH A 10 510 42 HOH HOH . 
H 5 HOH A 11 511 52 HOH HOH . 
H 5 HOH A 12 512 195 HOH HOH . 
H 5 HOH A 13 513 68 HOH HOH . 
H 5 HOH A 14 514 123 HOH HOH . 
H 5 HOH A 15 515 179 HOH HOH . 
H 5 HOH A 16 516 48 HOH HOH . 
H 5 HOH A 17 517 67 HOH HOH . 
H 5 HOH A 18 518 138 HOH HOH . 
H 5 HOH A 19 519 187 HOH HOH . 
H 5 HOH A 20 520 163 HOH HOH . 
H 5 HOH A 21 521 56 HOH HOH . 
H 5 HOH A 22 522 83 HOH HOH . 
H 5 HOH A 23 523 81 HOH HOH . 
H 5 HOH A 24 524 72 HOH HOH . 
H 5 HOH A 25 525 14 HOH HOH . 
H 5 HOH A 26 526 200 HOH HOH . 
H 5 HOH A 27 527 69 HOH HOH . 
H 5 HOH A 28 528 6 HOH HOH . 
H 5 HOH A 29 529 168 HOH HOH . 
H 5 HOH A 30 530 50 HOH HOH . 
H 5 HOH A 31 531 22 HOH HOH . 
H 5 HOH A 32 532 220 HOH HOH . 
H 5 HOH A 33 533 114 HOH HOH . 
H 5 HOH A 34 534 77 HOH HOH . 
H 5 HOH A 35 535 166 HOH HOH . 
H 5 HOH A 36 536 49 HOH HOH . 
H 5 HOH A 37 537 29 HOH HOH . 
H 5 HOH A 38 538 97 HOH HOH . 
H 5 HOH A 39 539 11 HOH HOH . 
H 5 HOH A 40 540 41 HOH HOH . 
H 5 HOH A 41 541 23 HOH HOH . 
H 5 HOH A 42 542 27 HOH HOH . 
H 5 HOH A 43 543 30 HOH HOH . 
H 5 HOH A 44 544 85 HOH HOH . 
H 5 HOH A 45 545 198 HOH HOH . 
H 5 HOH A 46 546 2 HOH HOH . 
H 5 HOH A 47 547 153 HOH HOH . 
H 5 HOH A 48 548 57 HOH HOH . 
H 5 HOH A 49 549 143 HOH HOH . 
H 5 HOH A 50 550 61 HOH HOH . 
H 5 HOH A 51 551 73 HOH HOH . 
H 5 HOH A 52 552 10 HOH HOH . 
H 5 HOH A 53 553 102 HOH HOH . 
H 5 HOH A 54 554 211 HOH HOH . 
H 5 HOH A 55 555 38 HOH HOH . 
H 5 HOH A 56 556 39 HOH HOH . 
H 5 HOH A 57 557 40 HOH HOH . 
H 5 HOH A 58 558 4 HOH HOH . 
H 5 HOH A 59 559 219 HOH HOH . 
H 5 HOH A 60 560 62 HOH HOH . 
H 5 HOH A 61 561 18 HOH HOH . 
H 5 HOH A 62 562 94 HOH HOH . 
H 5 HOH A 63 563 148 HOH HOH . 
H 5 HOH A 64 564 21 HOH HOH . 
H 5 HOH A 65 565 66 HOH HOH . 
H 5 HOH A 66 566 190 HOH HOH . 
H 5 HOH A 67 567 100 HOH HOH . 
H 5 HOH A 68 568 43 HOH HOH . 
H 5 HOH A 69 569 5 HOH HOH . 
H 5 HOH A 70 570 228 HOH HOH . 
H 5 HOH A 71 571 25 HOH HOH . 
H 5 HOH A 72 572 3 HOH HOH . 
H 5 HOH A 73 573 130 HOH HOH . 
H 5 HOH A 74 574 189 HOH HOH . 
H 5 HOH A 75 575 63 HOH HOH . 
H 5 HOH A 76 576 84 HOH HOH . 
H 5 HOH A 77 577 54 HOH HOH . 
H 5 HOH A 78 578 150 HOH HOH . 
H 5 HOH A 79 579 45 HOH HOH . 
H 5 HOH A 80 580 92 HOH HOH . 
H 5 HOH A 81 581 185 HOH HOH . 
H 5 HOH A 82 582 16 HOH HOH . 
H 5 HOH A 83 583 65 HOH HOH . 
H 5 HOH A 84 584 1 HOH HOH . 
H 5 HOH A 85 585 89 HOH HOH . 
H 5 HOH A 86 586 104 HOH HOH . 
H 5 HOH A 87 587 82 HOH HOH . 
H 5 HOH A 88 588 108 HOH HOH . 
H 5 HOH A 89 589 20 HOH HOH . 
H 5 HOH A 90 590 110 HOH HOH . 
H 5 HOH A 91 591 232 HOH HOH . 
H 5 HOH A 92 592 109 HOH HOH . 
H 5 HOH A 93 593 194 HOH HOH . 
H 5 HOH A 94 594 122 HOH HOH . 
H 5 HOH A 95 595 26 HOH HOH . 
H 5 HOH A 96 596 35 HOH HOH . 
H 5 HOH A 97 597 7 HOH HOH . 
H 5 HOH A 98 598 91 HOH HOH . 
H 5 HOH A 99 599 101 HOH HOH . 
H 5 HOH A 100 600 78 HOH HOH . 
H 5 HOH A 101 601 127 HOH HOH . 
H 5 HOH A 102 602 156 HOH HOH . 
H 5 HOH A 103 603 64 HOH HOH . 
H 5 HOH A 104 604 103 HOH HOH . 
H 5 HOH A 105 605 107 HOH HOH . 
H 5 HOH A 106 606 46 HOH HOH . 
H 5 HOH A 107 607 87 HOH HOH . 
H 5 HOH A 108 608 95 HOH HOH . 
H 5 HOH A 109 609 86 HOH HOH . 
H 5 HOH A 110 610 15 HOH HOH . 
H 5 HOH A 111 611 144 HOH HOH . 
H 5 HOH A 112 612 12 HOH HOH . 
H 5 HOH A 113 613 204 HOH HOH . 
H 5 HOH A 114 614 17 HOH HOH . 
H 5 HOH A 115 615 32 HOH HOH . 
H 5 HOH A 116 616 58 HOH HOH . 
H 5 HOH A 117 617 165 HOH HOH . 
H 5 HOH A 118 618 99 HOH HOH . 
H 5 HOH A 119 619 70 HOH HOH . 
H 5 HOH A 120 620 111 HOH HOH . 
H 5 HOH A 121 621 60 HOH HOH . 
H 5 HOH A 122 622 231 HOH HOH . 
H 5 HOH A 123 623 105 HOH HOH . 
H 5 HOH A 124 624 175 HOH HOH . 
H 5 HOH A 125 625 8 HOH HOH . 
H 5 HOH A 126 626 124 HOH HOH . 
H 5 HOH A 127 627 180 HOH HOH . 
H 5 HOH A 128 628 182 HOH HOH . 
H 5 HOH A 129 629 201 HOH HOH . 
H 5 HOH A 130 630 19 HOH HOH . 
H 5 HOH A 131 631 59 HOH HOH . 
H 5 HOH A 132 632 151 HOH HOH . 
H 5 HOH A 133 633 224 HOH HOH . 
H 5 HOH A 134 634 115 HOH HOH . 
H 5 HOH A 135 635 33 HOH HOH . 
H 5 HOH A 136 636 202 HOH HOH . 
H 5 HOH A 137 637 154 HOH HOH . 
H 5 HOH A 138 638 164 HOH HOH . 
H 5 HOH A 139 639 147 HOH HOH . 
H 5 HOH A 140 640 31 HOH HOH . 
H 5 HOH A 141 641 88 HOH HOH . 
H 5 HOH A 142 642 93 HOH HOH . 
H 5 HOH A 143 643 196 HOH HOH . 
H 5 HOH A 144 644 217 HOH HOH . 
H 5 HOH A 145 645 79 HOH HOH . 
H 5 HOH A 146 646 13 HOH HOH . 
H 5 HOH A 147 647 178 HOH HOH . 
H 5 HOH A 148 648 90 HOH HOH . 
H 5 HOH A 149 649 160 HOH HOH . 
H 5 HOH A 150 650 238 HOH HOH . 
H 5 HOH A 151 651 171 HOH HOH . 
H 5 HOH A 152 652 169 HOH HOH . 
H 5 HOH A 153 653 131 HOH HOH . 
H 5 HOH A 154 654 106 HOH HOH . 
H 5 HOH A 155 655 98 HOH HOH . 
H 5 HOH A 156 656 222 HOH HOH . 
H 5 HOH A 157 657 192 HOH HOH . 
H 5 HOH A 158 658 71 HOH HOH . 
H 5 HOH A 159 659 80 HOH HOH . 
H 5 HOH A 160 660 75 HOH HOH . 
H 5 HOH A 161 661 36 HOH HOH . 
H 5 HOH A 162 662 230 HOH HOH . 
H 5 HOH A 163 663 197 HOH HOH . 
H 5 HOH A 164 664 191 HOH HOH . 
H 5 HOH A 165 665 96 HOH HOH . 
H 5 HOH A 166 666 237 HOH HOH . 
H 5 HOH A 167 667 167 HOH HOH . 
H 5 HOH A 168 668 206 HOH HOH . 
H 5 HOH A 169 669 44 HOH HOH . 
H 5 HOH A 170 670 174 HOH HOH . 
H 5 HOH A 171 671 139 HOH HOH . 
H 5 HOH A 172 672 126 HOH HOH . 
H 5 HOH A 173 673 129 HOH HOH . 
H 5 HOH A 174 674 229 HOH HOH . 
H 5 HOH A 175 675 74 HOH HOH . 
H 5 HOH A 176 676 132 HOH HOH . 
H 5 HOH A 177 677 223 HOH HOH . 
H 5 HOH A 178 678 177 HOH HOH . 
H 5 HOH A 179 679 209 HOH HOH . 
H 5 HOH A 180 680 215 HOH HOH . 
H 5 HOH A 181 681 234 HOH HOH . 
H 5 HOH A 182 682 116 HOH HOH . 
H 5 HOH A 183 683 47 HOH HOH . 
H 5 HOH A 184 684 137 HOH HOH . 
H 5 HOH A 185 685 152 HOH HOH . 
H 5 HOH A 186 686 210 HOH HOH . 
H 5 HOH A 187 687 181 HOH HOH . 
H 5 HOH A 188 688 213 HOH HOH . 
H 5 HOH A 189 689 236 HOH HOH . 
H 5 HOH A 190 690 157 HOH HOH . 
H 5 HOH A 191 691 140 HOH HOH . 
H 5 HOH A 192 692 34 HOH HOH . 
H 5 HOH A 193 693 183 HOH HOH . 
H 5 HOH A 194 694 113 HOH HOH . 
H 5 HOH A 195 695 76 HOH HOH . 
H 5 HOH A 196 696 9 HOH HOH . 
H 5 HOH A 197 697 188 HOH HOH . 
H 5 HOH A 198 698 136 HOH HOH . 
H 5 HOH A 199 699 120 HOH HOH . 
H 5 HOH A 200 700 128 HOH HOH . 
H 5 HOH A 201 701 203 HOH HOH . 
H 5 HOH A 202 702 142 HOH HOH . 
H 5 HOH A 203 703 176 HOH HOH . 
H 5 HOH A 204 704 134 HOH HOH . 
H 5 HOH A 205 705 226 HOH HOH . 
H 5 HOH A 206 706 186 HOH HOH . 
H 5 HOH A 207 707 205 HOH HOH . 
H 5 HOH A 208 708 37 HOH HOH . 
H 5 HOH A 209 709 214 HOH HOH . 
H 5 HOH A 210 710 125 HOH HOH . 
H 5 HOH A 211 711 207 HOH HOH . 
H 5 HOH A 212 712 28 HOH HOH . 
H 5 HOH A 213 713 155 HOH HOH . 
H 5 HOH A 214 714 159 HOH HOH . 
H 5 HOH A 215 715 239 HOH HOH . 
H 5 HOH A 216 716 193 HOH HOH . 
H 5 HOH A 217 717 121 HOH HOH . 
H 5 HOH A 218 718 53 HOH HOH . 
H 5 HOH A 219 719 221 HOH HOH . 
H 5 HOH A 220 720 135 HOH HOH . 
H 5 HOH A 221 721 119 HOH HOH . 
H 5 HOH A 222 722 225 HOH HOH . 
H 5 HOH A 223 723 51 HOH HOH . 
H 5 HOH A 224 724 172 HOH HOH . 
H 5 HOH A 225 725 199 HOH HOH . 
H 5 HOH A 226 726 173 HOH HOH . 
H 5 HOH A 227 727 55 HOH HOH . 
H 5 HOH A 228 728 184 HOH HOH . 
H 5 HOH A 229 729 117 HOH HOH . 
H 5 HOH A 230 730 162 HOH HOH . 
H 5 HOH A 231 731 145 HOH HOH . 
H 5 HOH A 232 732 235 HOH HOH . 
H 5 HOH A 233 733 141 HOH HOH . 
H 5 HOH A 234 734 212 HOH HOH . 
H 5 HOH A 235 735 208 HOH HOH . 
H 5 HOH A 236 736 227 HOH HOH . 
H 5 HOH A 237 737 216 HOH HOH . 
H 5 HOH A 238 738 233 HOH HOH . 
H 5 HOH A 239 739 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 12.681 71.595 23.526 1 40.87 ? C1 EDO 401 A 1 
HETATM 2 O O1 EDO . . . B 2 13.33 72.651 24.21 1 43.31 ? O1 EDO 401 A 1 
HETATM 3 C C2 EDO . . . B 2 13.607 71.112 22.437 1 50.93 ? C2 EDO 401 A 1 
HETATM 4 O O2 EDO . . . B 2 13.901 69.753 22.7 1 58.27 ? O2 EDO 401 A 1 
HETATM 5 H H11 EDO . . . B 2 12.452 70.78 24.216 1 48.94 ? H11 EDO 401 A 1 
HETATM 6 H H12 EDO . . . B 2 11.74 71.944 23.096 1 48.94 ? H12 EDO 401 A 1 
HETATM 7 H HO1 EDO . . . B 2 12.751 72.988 24.907 1 51.86 ? HO1 EDO 401 A 1 
HETATM 8 H H21 EDO . . . B 2 14.524 71.705 22.427 1 61.01 ? H21 EDO 401 A 1 
HETATM 9 H H22 EDO . . . B 2 13.13 71.216 21.459 1 61.01 ? H22 EDO 401 A 1 
HETATM 10 H HO2 EDO . . . B 2 14.498 69.414 22.019 1 69.82 ? HO2 EDO 401 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          21 
_model_server_stats.element_count           10 
#