data_6HVF # _model_server_result.job_id 4Kty5XcGDIyesuyJ4Pdixg _model_server_result.datetime_utc '2024-10-10 14:25:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hvf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 6HVF # _exptl.entry_id 6HVF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.577 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-[3-ethyl-6-[4-(4-methylpiperazin-1-yl)phenyl]-4-oxidanylidene-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]prop-2-enamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.23 _cell.angle_beta 91.64 _cell.angle_gamma 90.03 _cell.entry_id 6HVF _cell.length_a 42.17 _cell.length_b 62.97 _cell.length_c 74.54 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HVF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 98 A CYS 345 1_555 C CBH GUT . A GUT 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale2 B SG CYS 98 B CYS 345 1_555 F CBH GUT . B GUT 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? # _chem_comp.formula 'C28 H30 N6 O2' _chem_comp.formula_weight 482.577 _chem_comp.id GUT _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-[3-ethyl-6-[4-(4-methylpiperazin-1-yl)phenyl]-4-oxidanylidene-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]prop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6HVF _atom_sites.fract_transf_matrix[1][1] 0.023714 _atom_sites.fract_transf_matrix[1][2] 0.000013 _atom_sites.fract_transf_matrix[1][3] 0.000694 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015881 _atom_sites.fract_transf_matrix[2][3] 0.002869 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GUT A 1 601 2 GUT DRG . D 3 EDO A 1 602 1 EDO EDO . E 3 EDO A 1 603 3 EDO EDO . F 2 GUT B 1 601 1 GUT DRG . G 3 EDO B 1 602 4 EDO EDO . H 4 HOH A 1 701 2 HOH HOH . H 4 HOH A 2 702 134 HOH HOH . H 4 HOH A 3 703 116 HOH HOH . H 4 HOH A 4 704 11 HOH HOH . H 4 HOH A 5 705 10 HOH HOH . H 4 HOH A 6 706 98 HOH HOH . H 4 HOH A 7 707 3 HOH HOH . H 4 HOH A 8 708 21 HOH HOH . H 4 HOH A 9 709 79 HOH HOH . H 4 HOH A 10 710 20 HOH HOH . H 4 HOH A 11 711 1 HOH HOH . H 4 HOH A 12 712 8 HOH HOH . H 4 HOH A 13 713 206 HOH HOH . H 4 HOH A 14 714 5 HOH HOH . H 4 HOH A 15 715 67 HOH HOH . H 4 HOH A 16 716 42 HOH HOH . H 4 HOH A 17 717 201 HOH HOH . H 4 HOH A 18 718 25 HOH HOH . H 4 HOH A 19 719 24 HOH HOH . H 4 HOH A 20 720 81 HOH HOH . H 4 HOH A 21 721 36 HOH HOH . H 4 HOH A 22 722 12 HOH HOH . H 4 HOH A 23 723 112 HOH HOH . H 4 HOH A 24 724 65 HOH HOH . H 4 HOH A 25 725 13 HOH HOH . H 4 HOH A 26 726 18 HOH HOH . H 4 HOH A 27 727 195 HOH HOH . H 4 HOH A 28 728 100 HOH HOH . H 4 HOH A 29 729 50 HOH HOH . H 4 HOH A 30 730 170 HOH HOH . H 4 HOH A 31 731 111 HOH HOH . H 4 HOH A 32 732 22 HOH HOH . H 4 HOH A 33 733 9 HOH HOH . H 4 HOH A 34 734 214 HOH HOH . H 4 HOH A 35 735 35 HOH HOH . H 4 HOH A 36 736 51 HOH HOH . H 4 HOH A 37 737 97 HOH HOH . H 4 HOH A 38 738 38 HOH HOH . H 4 HOH A 39 739 88 HOH HOH . H 4 HOH A 40 740 39 HOH HOH . H 4 HOH A 41 741 215 HOH HOH . H 4 HOH A 42 742 37 HOH HOH . H 4 HOH A 43 743 23 HOH HOH . H 4 HOH A 44 744 7 HOH HOH . H 4 HOH A 45 745 6 HOH HOH . H 4 HOH A 46 746 57 HOH HOH . H 4 HOH A 47 747 26 HOH HOH . H 4 HOH A 48 748 175 HOH HOH . H 4 HOH A 49 749 138 HOH HOH . H 4 HOH A 50 750 114 HOH HOH . H 4 HOH A 51 751 207 HOH HOH . H 4 HOH A 52 752 40 HOH HOH . H 4 HOH A 53 753 166 HOH HOH . H 4 HOH A 54 754 110 HOH HOH . H 4 HOH A 55 755 27 HOH HOH . H 4 HOH A 56 756 19 HOH HOH . H 4 HOH A 57 757 109 HOH HOH . H 4 HOH A 58 758 73 HOH HOH . H 4 HOH A 59 759 113 HOH HOH . H 4 HOH A 60 760 173 HOH HOH . H 4 HOH A 61 761 221 HOH HOH . H 4 HOH A 62 762 202 HOH HOH . H 4 HOH A 63 763 162 HOH HOH . H 4 HOH A 64 764 64 HOH HOH . H 4 HOH A 65 765 90 HOH HOH . H 4 HOH A 66 766 224 HOH HOH . H 4 HOH A 67 767 69 HOH HOH . H 4 HOH A 68 768 164 HOH HOH . H 4 HOH A 69 769 136 HOH HOH . H 4 HOH A 70 770 226 HOH HOH . H 4 HOH A 71 771 222 HOH HOH . H 4 HOH A 72 772 194 HOH HOH . H 4 HOH A 73 773 144 HOH HOH . H 4 HOH A 74 774 216 HOH HOH . H 4 HOH A 75 775 83 HOH HOH . H 4 HOH A 76 776 183 HOH HOH . I 4 HOH B 1 701 209 HOH HOH . I 4 HOH B 2 702 56 HOH HOH . I 4 HOH B 3 703 187 HOH HOH . I 4 HOH B 4 704 77 HOH HOH . I 4 HOH B 5 705 54 HOH HOH . I 4 HOH B 6 706 218 HOH HOH . I 4 HOH B 7 707 147 HOH HOH . I 4 HOH B 8 708 198 HOH HOH . I 4 HOH B 9 709 220 HOH HOH . I 4 HOH B 10 710 4 HOH HOH . I 4 HOH B 11 711 30 HOH HOH . I 4 HOH B 12 712 145 HOH HOH . I 4 HOH B 13 713 212 HOH HOH . I 4 HOH B 14 714 125 HOH HOH . I 4 HOH B 15 715 55 HOH HOH . I 4 HOH B 16 716 130 HOH HOH . I 4 HOH B 17 717 126 HOH HOH . I 4 HOH B 18 718 89 HOH HOH . I 4 HOH B 19 719 119 HOH HOH . I 4 HOH B 20 720 91 HOH HOH . I 4 HOH B 21 721 46 HOH HOH . I 4 HOH B 22 722 17 HOH HOH . I 4 HOH B 23 723 158 HOH HOH . I 4 HOH B 24 724 95 HOH HOH . I 4 HOH B 25 725 52 HOH HOH . I 4 HOH B 26 726 47 HOH HOH . I 4 HOH B 27 727 103 HOH HOH . I 4 HOH B 28 728 93 HOH HOH . I 4 HOH B 29 729 29 HOH HOH . I 4 HOH B 30 730 68 HOH HOH . I 4 HOH B 31 731 32 HOH HOH . I 4 HOH B 32 732 59 HOH HOH . I 4 HOH B 33 733 120 HOH HOH . I 4 HOH B 34 734 70 HOH HOH . I 4 HOH B 35 735 75 HOH HOH . I 4 HOH B 36 736 16 HOH HOH . I 4 HOH B 37 737 82 HOH HOH . I 4 HOH B 38 738 99 HOH HOH . I 4 HOH B 39 739 160 HOH HOH . I 4 HOH B 40 740 85 HOH HOH . I 4 HOH B 41 741 60 HOH HOH . I 4 HOH B 42 742 62 HOH HOH . I 4 HOH B 43 743 105 HOH HOH . I 4 HOH B 44 744 33 HOH HOH . I 4 HOH B 45 745 80 HOH HOH . I 4 HOH B 46 746 154 HOH HOH . I 4 HOH B 47 747 31 HOH HOH . I 4 HOH B 48 748 58 HOH HOH . I 4 HOH B 49 749 34 HOH HOH . I 4 HOH B 50 750 15 HOH HOH . I 4 HOH B 51 751 108 HOH HOH . I 4 HOH B 52 752 159 HOH HOH . I 4 HOH B 53 753 142 HOH HOH . I 4 HOH B 54 754 153 HOH HOH . I 4 HOH B 55 755 107 HOH HOH . I 4 HOH B 56 756 196 HOH HOH . I 4 HOH B 57 757 131 HOH HOH . I 4 HOH B 58 758 217 HOH HOH . I 4 HOH B 59 759 213 HOH HOH . I 4 HOH B 60 760 148 HOH HOH . I 4 HOH B 61 761 179 HOH HOH . I 4 HOH B 62 762 94 HOH HOH . I 4 HOH B 63 763 66 HOH HOH . I 4 HOH B 64 764 122 HOH HOH . I 4 HOH B 65 765 14 HOH HOH . I 4 HOH B 66 766 71 HOH HOH . I 4 HOH B 67 767 189 HOH HOH . I 4 HOH B 68 768 48 HOH HOH . I 4 HOH B 69 769 45 HOH HOH . I 4 HOH B 70 770 63 HOH HOH . I 4 HOH B 71 771 72 HOH HOH . I 4 HOH B 72 772 41 HOH HOH . I 4 HOH B 73 773 127 HOH HOH . I 4 HOH B 74 774 123 HOH HOH . I 4 HOH B 75 775 199 HOH HOH . I 4 HOH B 76 776 167 HOH HOH . I 4 HOH B 77 777 96 HOH HOH . I 4 HOH B 78 778 84 HOH HOH . I 4 HOH B 79 779 124 HOH HOH . I 4 HOH B 80 780 43 HOH HOH . I 4 HOH B 81 781 197 HOH HOH . I 4 HOH B 82 782 53 HOH HOH . I 4 HOH B 83 783 185 HOH HOH . I 4 HOH B 84 784 78 HOH HOH . I 4 HOH B 85 785 168 HOH HOH . I 4 HOH B 86 786 172 HOH HOH . I 4 HOH B 87 787 143 HOH HOH . I 4 HOH B 88 788 204 HOH HOH . I 4 HOH B 89 789 155 HOH HOH . I 4 HOH B 90 790 118 HOH HOH . I 4 HOH B 91 791 223 HOH HOH . I 4 HOH B 92 792 211 HOH HOH . I 4 HOH B 93 793 121 HOH HOH . I 4 HOH B 94 794 225 HOH HOH . I 4 HOH B 95 795 205 HOH HOH . I 4 HOH B 96 796 44 HOH HOH . I 4 HOH B 97 797 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 GUT . . . F 2 -1.765 4.832 32.106 1 41.11 ? C4 GUT 601 B 1 HETATM 2 C C5 GUT . . . F 2 -2.937 5.464 31.933 1 42.99 ? C5 GUT 601 B 1 HETATM 3 C C6 GUT . . . F 2 -4.051 4.96 32.487 1 48.03 ? C6 GUT 601 B 1 HETATM 4 N N1 GUT . . . F 2 -4.011 3.828 33.219 1 49.26 ? N1 GUT 601 B 1 HETATM 5 N N3 GUT . . . F 2 -1.673 3.705 32.822 1 42.5 ? N3 GUT 601 B 1 HETATM 6 C CAY GUT . . . F 2 1.403 11.229 27.627 1 61.7 ? CAY GUT 601 B 1 HETATM 7 C CAZ GUT . . . F 2 2.03 11.721 26.339 1 62.74 ? CAZ GUT 601 B 1 HETATM 8 N NBA GUT . . . F 2 3.489 11.563 26.375 1 64.25 ? NBA GUT 601 B 1 HETATM 9 C CBD GUT . . . F 2 4.062 12.17 25.165 1 65.07 ? CBD GUT 601 B 1 HETATM 10 C CBB GUT . . . F 2 3.784 10.123 26.399 1 61.36 ? CBB GUT 601 B 1 HETATM 11 C CBC GUT . . . F 2 3.297 9.485 27.69 1 62.06 ? CBC GUT 601 B 1 HETATM 12 N NAX GUT . . . F 2 1.913 9.896 28.021 1 60.15 ? NAX GUT 601 B 1 HETATM 13 C CAU GUT . . . F 2 1.113 9.081 28.721 1 53.25 ? CAU GUT 601 B 1 HETATM 14 C CAV GUT . . . F 2 1.555 7.837 29.159 1 50.03 ? CAV GUT 601 B 1 HETATM 15 C CAW GUT . . . F 2 0.699 7.013 29.885 1 47.71 ? CAW GUT 601 B 1 HETATM 16 C CAT GUT . . . F 2 -0.176 9.497 29.015 1 47.56 ? CAT GUT 601 B 1 HETATM 17 C CAS GUT . . . F 2 -1.009 8.668 29.746 1 44.68 ? CAS GUT 601 B 1 HETATM 18 C CAR GUT . . . F 2 -0.603 7.411 30.184 1 42.37 ? CAR GUT 601 B 1 HETATM 19 C CAH GUT . . . F 2 -1.37 6.563 30.894 1 42.51 ? CAH GUT 601 B 1 HETATM 20 N NAG GUT . . . F 2 -0.816 5.506 31.47 1 42.23 ? NAG GUT 601 B 1 HETATM 21 C C2 GUT . . . F 2 -2.808 3.161 33.409 1 43.23 ? C2 GUT 601 B 1 HETATM 22 C CBI GUT . . . F 2 -5.244 3.277 33.827 1 53.92 ? CBI GUT 601 B 1 HETATM 23 C CBJ GUT . . . F 2 -5.919 4.305 34.741 1 59.84 ? CBJ GUT 601 B 1 HETATM 24 O O6 GUT . . . F 2 -5.138 5.518 32.342 1 44.56 ? O6 GUT 601 B 1 HETATM 25 C CAI GUT . . . F 2 -2.69 6.552 31.178 1 44.46 ? CAI GUT 601 B 1 HETATM 26 C CAJ GUT . . . F 2 -3.608 7.442 30.75 1 48.97 ? CAJ GUT 601 B 1 HETATM 27 C CAL GUT . . . F 2 -3.714 7.667 29.376 1 50.33 ? CAL GUT 601 B 1 HETATM 28 C CAP GUT . . . F 2 -4.465 8.137 31.598 1 49.82 ? CAP GUT 601 B 1 HETATM 29 C CAO GUT . . . F 2 -5.381 9.041 31.052 1 52.77 ? CAO GUT 601 B 1 HETATM 30 C CAN GUT . . . F 2 -5.46 9.262 29.674 1 53.71 ? CAN GUT 601 B 1 HETATM 31 C CAM GUT . . . F 2 -4.62 8.56 28.817 1 52.35 ? CAM GUT 601 B 1 HETATM 32 N NAQ GUT . . . F 2 -4.618 8.741 27.485 1 54.58 ? NAQ GUT 601 B 1 HETATM 33 C CBE GUT . . . F 2 -5.75 8.845 26.764 1 54 ? CBE GUT 601 B 1 HETATM 34 O OBF GUT . . . F 2 -6.888 8.757 27.218 1 61.36 ? OBF GUT 601 B 1 HETATM 35 C CBG GUT . . . F 2 -5.513 9.09 25.265 1 49.23 ? CBG GUT 601 B 1 HETATM 36 C CBH GUT . . . F 2 -6.338 8.13 24.394 1 38.54 ? CBH GUT 601 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #