data_6HVH # _model_server_result.job_id N-ad4a6W0rkka81ZYfggCg _model_server_result.datetime_utc '2024-11-25 17:36:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hvh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 6HVH # _exptl.entry_id 6HVH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6HVH _cell.length_a 103.06 _cell.length_b 103.06 _cell.length_c 254.825 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HVH _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id F6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms FRUCTOSE-6-PHOSPHATE;6-O-phosphono-beta-D-fructose;6-O-phosphono-D-fructose;6-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 F6P sing 83 n n O1 HO1 F6P sing 84 n n C1 C2 F6P sing 85 n n C1 H11 F6P sing 86 n n C1 H12 F6P sing 87 n n C2 O2 F6P sing 88 n n C2 C3 F6P sing 89 n n C2 O5 F6P sing 90 n n O2 HO2 F6P sing 91 n n C3 O3 F6P sing 92 n n C3 C4 F6P sing 93 n n C3 H3 F6P sing 94 n n O3 HO3 F6P sing 95 n n C4 O4 F6P sing 96 n n C4 C5 F6P sing 97 n n C4 H4 F6P sing 98 n n O4 HO4 F6P sing 99 n n C5 O5 F6P sing 100 n n C5 C6 F6P sing 101 n n C5 H5 F6P sing 102 n n C6 O6 F6P sing 103 n n C6 H61 F6P sing 104 n n C6 H62 F6P sing 105 n n O6 P F6P sing 106 n n P O1P F6P doub 107 n n P O2P F6P sing 108 n n P O3P F6P sing 109 n n O2P HOP2 F6P sing 110 n n O3P HOP3 F6P sing 111 n n # _pdbx_chem_comp_identifier.comp_id F6P _pdbx_chem_comp_identifier.identifier b-D-Fruf6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 6HVH _atom_sites.fract_transf_matrix[1][1] 0.009703 _atom_sites.fract_transf_matrix[1][2] 0.005602 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003924 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GV2 A 1 601 447 GV2 DRG . C 3 POP A 1 602 449 POP POP . D 4 FLC A 1 603 450 FLC FLC . E 5 F6P A 1 604 451 F6P F6P . F 6 HOH A 1 701 598 HOH HOH . F 6 HOH A 2 702 616 HOH HOH . F 6 HOH A 3 703 605 HOH HOH . F 6 HOH A 4 704 613 HOH HOH . F 6 HOH A 5 705 553 HOH HOH . F 6 HOH A 6 706 615 HOH HOH . F 6 HOH A 7 707 601 HOH HOH . F 6 HOH A 8 708 568 HOH HOH . F 6 HOH A 9 709 522 HOH HOH . F 6 HOH A 10 710 518 HOH HOH . F 6 HOH A 11 711 516 HOH HOH . F 6 HOH A 12 712 607 HOH HOH . F 6 HOH A 13 713 623 HOH HOH . F 6 HOH A 14 714 589 HOH HOH . F 6 HOH A 15 715 462 HOH HOH . F 6 HOH A 16 716 579 HOH HOH . F 6 HOH A 17 717 592 HOH HOH . F 6 HOH A 18 718 463 HOH HOH . F 6 HOH A 19 719 540 HOH HOH . F 6 HOH A 20 720 556 HOH HOH . F 6 HOH A 21 721 575 HOH HOH . F 6 HOH A 22 722 627 HOH HOH . F 6 HOH A 23 723 554 HOH HOH . F 6 HOH A 24 724 466 HOH HOH . F 6 HOH A 25 725 541 HOH HOH . F 6 HOH A 26 726 565 HOH HOH . F 6 HOH A 27 727 527 HOH HOH . F 6 HOH A 28 728 473 HOH HOH . F 6 HOH A 29 729 521 HOH HOH . F 6 HOH A 30 730 487 HOH HOH . F 6 HOH A 31 731 524 HOH HOH . F 6 HOH A 32 732 573 HOH HOH . F 6 HOH A 33 733 580 HOH HOH . F 6 HOH A 34 734 635 HOH HOH . F 6 HOH A 35 735 489 HOH HOH . F 6 HOH A 36 736 464 HOH HOH . F 6 HOH A 37 737 542 HOH HOH . F 6 HOH A 38 738 567 HOH HOH . F 6 HOH A 39 739 537 HOH HOH . F 6 HOH A 40 740 515 HOH HOH . F 6 HOH A 41 741 543 HOH HOH . F 6 HOH A 42 742 511 HOH HOH . F 6 HOH A 43 743 535 HOH HOH . F 6 HOH A 44 744 502 HOH HOH . F 6 HOH A 45 745 578 HOH HOH . F 6 HOH A 46 746 455 HOH HOH . F 6 HOH A 47 747 471 HOH HOH . F 6 HOH A 48 748 520 HOH HOH . F 6 HOH A 49 749 557 HOH HOH . F 6 HOH A 50 750 632 HOH HOH . F 6 HOH A 51 751 536 HOH HOH . F 6 HOH A 52 752 624 HOH HOH . F 6 HOH A 53 753 534 HOH HOH . F 6 HOH A 54 754 558 HOH HOH . F 6 HOH A 55 755 548 HOH HOH . F 6 HOH A 56 756 479 HOH HOH . F 6 HOH A 57 757 625 HOH HOH . F 6 HOH A 58 758 531 HOH HOH . F 6 HOH A 59 759 486 HOH HOH . F 6 HOH A 60 760 550 HOH HOH . F 6 HOH A 61 761 510 HOH HOH . F 6 HOH A 62 762 481 HOH HOH . F 6 HOH A 63 763 546 HOH HOH . F 6 HOH A 64 764 583 HOH HOH . F 6 HOH A 65 765 476 HOH HOH . F 6 HOH A 66 766 453 HOH HOH . F 6 HOH A 67 767 465 HOH HOH . F 6 HOH A 68 768 474 HOH HOH . F 6 HOH A 69 769 493 HOH HOH . F 6 HOH A 70 770 608 HOH HOH . F 6 HOH A 71 771 482 HOH HOH . F 6 HOH A 72 772 630 HOH HOH . F 6 HOH A 73 773 595 HOH HOH . F 6 HOH A 74 774 457 HOH HOH . F 6 HOH A 75 775 590 HOH HOH . F 6 HOH A 76 776 560 HOH HOH . F 6 HOH A 77 777 559 HOH HOH . F 6 HOH A 78 778 477 HOH HOH . F 6 HOH A 79 779 504 HOH HOH . F 6 HOH A 80 780 604 HOH HOH . F 6 HOH A 81 781 549 HOH HOH . F 6 HOH A 82 782 490 HOH HOH . F 6 HOH A 83 783 483 HOH HOH . F 6 HOH A 84 784 459 HOH HOH . F 6 HOH A 85 785 582 HOH HOH . F 6 HOH A 86 786 532 HOH HOH . F 6 HOH A 87 787 526 HOH HOH . F 6 HOH A 88 788 484 HOH HOH . F 6 HOH A 89 789 467 HOH HOH . F 6 HOH A 90 790 572 HOH HOH . F 6 HOH A 91 791 552 HOH HOH . F 6 HOH A 92 792 499 HOH HOH . F 6 HOH A 93 793 547 HOH HOH . F 6 HOH A 94 794 480 HOH HOH . F 6 HOH A 95 795 544 HOH HOH . F 6 HOH A 96 796 614 HOH HOH . F 6 HOH A 97 797 533 HOH HOH . F 6 HOH A 98 798 492 HOH HOH . F 6 HOH A 99 799 468 HOH HOH . F 6 HOH A 100 800 495 HOH HOH . F 6 HOH A 101 801 496 HOH HOH . F 6 HOH A 102 802 594 HOH HOH . F 6 HOH A 103 803 569 HOH HOH . F 6 HOH A 104 804 628 HOH HOH . F 6 HOH A 105 805 618 HOH HOH . F 6 HOH A 106 806 577 HOH HOH . F 6 HOH A 107 807 561 HOH HOH . F 6 HOH A 108 808 617 HOH HOH . F 6 HOH A 109 809 629 HOH HOH . F 6 HOH A 110 810 470 HOH HOH . F 6 HOH A 111 811 514 HOH HOH . F 6 HOH A 112 812 458 HOH HOH . F 6 HOH A 113 813 562 HOH HOH . F 6 HOH A 114 814 538 HOH HOH . F 6 HOH A 115 815 525 HOH HOH . F 6 HOH A 116 816 539 HOH HOH . F 6 HOH A 117 817 478 HOH HOH . F 6 HOH A 118 818 622 HOH HOH . F 6 HOH A 119 819 469 HOH HOH . F 6 HOH A 120 820 584 HOH HOH . F 6 HOH A 121 821 454 HOH HOH . F 6 HOH A 122 822 456 HOH HOH . F 6 HOH A 123 823 519 HOH HOH . F 6 HOH A 124 824 475 HOH HOH . F 6 HOH A 125 825 612 HOH HOH . F 6 HOH A 126 826 621 HOH HOH . F 6 HOH A 127 827 593 HOH HOH . F 6 HOH A 128 828 626 HOH HOH . F 6 HOH A 129 829 517 HOH HOH . F 6 HOH A 130 830 636 HOH HOH . F 6 HOH A 131 831 529 HOH HOH . F 6 HOH A 132 832 506 HOH HOH . F 6 HOH A 133 833 633 HOH HOH . F 6 HOH A 134 834 488 HOH HOH . F 6 HOH A 135 835 603 HOH HOH . F 6 HOH A 136 836 620 HOH HOH . F 6 HOH A 137 837 500 HOH HOH . F 6 HOH A 138 838 609 HOH HOH . F 6 HOH A 139 839 566 HOH HOH . F 6 HOH A 140 840 555 HOH HOH . F 6 HOH A 141 841 485 HOH HOH . F 6 HOH A 142 842 570 HOH HOH . F 6 HOH A 143 843 551 HOH HOH . F 6 HOH A 144 844 597 HOH HOH . F 6 HOH A 145 845 491 HOH HOH . F 6 HOH A 146 846 461 HOH HOH . F 6 HOH A 147 847 472 HOH HOH . F 6 HOH A 148 848 494 HOH HOH . F 6 HOH A 149 849 600 HOH HOH . F 6 HOH A 150 850 460 HOH HOH . F 6 HOH A 151 851 528 HOH HOH . F 6 HOH A 152 852 501 HOH HOH . F 6 HOH A 153 853 571 HOH HOH . F 6 HOH A 154 854 508 HOH HOH . F 6 HOH A 155 855 563 HOH HOH . F 6 HOH A 156 856 505 HOH HOH . F 6 HOH A 157 857 642 HOH HOH . F 6 HOH A 158 858 497 HOH HOH . F 6 HOH A 159 859 631 HOH HOH . F 6 HOH A 160 860 591 HOH HOH . F 6 HOH A 161 861 503 HOH HOH . F 6 HOH A 162 862 634 HOH HOH . F 6 HOH A 163 863 602 HOH HOH . F 6 HOH A 164 864 585 HOH HOH . F 6 HOH A 165 865 639 HOH HOH . F 6 HOH A 166 866 509 HOH HOH . F 6 HOH A 167 867 576 HOH HOH . F 6 HOH A 168 868 513 HOH HOH . F 6 HOH A 169 869 599 HOH HOH . F 6 HOH A 170 870 596 HOH HOH . F 6 HOH A 171 871 581 HOH HOH . F 6 HOH A 172 872 574 HOH HOH . F 6 HOH A 173 873 606 HOH HOH . F 6 HOH A 174 874 523 HOH HOH . F 6 HOH A 175 875 498 HOH HOH . F 6 HOH A 176 876 564 HOH HOH . F 6 HOH A 177 877 512 HOH HOH . F 6 HOH A 178 878 610 HOH HOH . F 6 HOH A 179 879 640 HOH HOH . F 6 HOH A 180 880 638 HOH HOH . F 6 HOH A 181 881 619 HOH HOH . F 6 HOH A 182 882 611 HOH HOH . F 6 HOH A 183 883 588 HOH HOH . F 6 HOH A 184 884 637 HOH HOH . F 6 HOH A 185 885 530 HOH HOH . F 6 HOH A 186 886 641 HOH HOH . F 6 HOH A 187 887 545 HOH HOH . F 6 HOH A 188 888 586 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 F6P . . . E 5 58.271 68.49 268.137 1 37.2 ? O1 F6P 604 A 1 HETATM 2 C C1 F6P . . . E 5 59.159 67.832 269.042 1 31.82 ? C1 F6P 604 A 1 HETATM 3 C C2 F6P . . . E 5 60.51 68.562 269.126 1 28.79 ? C2 F6P 604 A 1 HETATM 4 O O2 F6P . . . E 5 61.313 67.757 270.013 1 28.27 ? O2 F6P 604 A 1 HETATM 5 C C3 F6P . . . E 5 60.418 70.025 269.595 1 29.04 ? C3 F6P 604 A 1 HETATM 6 O O3 F6P . . . E 5 60.443 70.103 271.022 1 31.03 ? O3 F6P 604 A 1 HETATM 7 C C4 F6P . . . E 5 61.558 70.69 268.891 1 27.9 ? C4 F6P 604 A 1 HETATM 8 O O4 F6P . . . E 5 61.396 72.095 268.663 1 29.98 ? O4 F6P 604 A 1 HETATM 9 C C5 F6P . . . E 5 61.483 69.952 267.558 1 28.56 ? C5 F6P 604 A 1 HETATM 10 O O5 F6P . . . E 5 61.12 68.622 267.855 1 23.97 ? O5 F6P 604 A 1 HETATM 11 C C6 F6P . . . E 5 62.783 69.91 266.758 1 30.6 ? C6 F6P 604 A 1 HETATM 12 O O6 F6P . . . E 5 62.541 69.289 265.496 1 28.65 ? O6 F6P 604 A 1 HETATM 13 P P F6P . . . E 5 62.778 70.156 264.163 1 30.96 ? P F6P 604 A 1 HETATM 14 O O1P F6P . . . E 5 62.39 69.133 263.112 1 29.32 ? O1P F6P 604 A 1 HETATM 15 O O2P F6P . . . E 5 64.245 70.515 264.135 1 29.35 ? O2P F6P 604 A 1 HETATM 16 O O3P F6P . . . E 5 61.823 71.342 264.289 1 28.93 ? O3P F6P 604 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #