data_6HX8 # _model_server_result.job_id xN6z_dwqguFdpaE-n7ymqw _model_server_result.datetime_utc '2025-07-01 10:00:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hx8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":501}' # _entry.id 6HX8 # _exptl.entry_id 6HX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HX8 _cell.length_a 105.67 _cell.length_b 159.92 _cell.length_c 181.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc6 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc7 G O2G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc9 H MG MG . A MG 502 1_555 V O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc10 H MG MG . A MG 502 1_555 V O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc11 H MG MG . A MG 502 1_555 V O HOH . A HOH 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc12 H MG MG . A MG 502 1_555 V O HOH . A HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc13 B OE1 GLN 11 B GLN 11 1_555 M MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc14 J O1A GDP . B GDP 501 1_555 M MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc15 M MG MG . B MG 504 1_555 W O HOH . B HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc16 M MG MG . B MG 504 1_555 W O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc17 M MG MG . B MG 504 1_555 W O HOH . B HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc18 M MG MG . B MG 504 1_555 X O HOH . C HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc19 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc20 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc21 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc22 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc23 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc24 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc25 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc26 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc27 N O1B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc28 O MG MG . C MG 502 1_555 X O HOH . C HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc29 O MG MG . C MG 502 1_555 X O HOH . C HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc30 O MG MG . C MG 502 1_555 X O HOH . C HOH 677 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc31 O MG MG . C MG 502 1_555 X O HOH . C HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc32 D OE1 GLN 11 D GLN 11 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc33 Q O1A GDP . D GDP 501 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc34 R MG MG . D MG 502 1_555 Y O HOH . D HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc35 R MG MG . D MG 502 1_555 Y O HOH . D HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc36 T O1G ACP . F ACP 401 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 6HX8 _atom_sites.fract_transf_matrix[1][1] 0.009463 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 9 GXN B 1 502 503 GXN LIG . L 10 MES B 1 503 504 MES MES . M 6 MG B 1 504 502 MG MG . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 503 CA CA . Q 8 GDP D 1 501 501 GDP GDP . R 6 MG D 1 502 502 MG MG . S 9 GXN D 1 503 503 GXN LIG . T 11 ACP F 1 401 401 ACP ACP . U 6 MG F 1 402 402 MG MG . V 12 HOH A 1 601 203 HOH HOH . V 12 HOH A 2 602 124 HOH HOH . V 12 HOH A 3 603 196 HOH HOH . V 12 HOH A 4 604 70 HOH HOH . V 12 HOH A 5 605 6 HOH HOH . V 12 HOH A 6 606 83 HOH HOH . V 12 HOH A 7 607 116 HOH HOH . V 12 HOH A 8 608 48 HOH HOH . V 12 HOH A 9 609 172 HOH HOH . V 12 HOH A 10 610 91 HOH HOH . V 12 HOH A 11 611 119 HOH HOH . V 12 HOH A 12 612 55 HOH HOH . V 12 HOH A 13 613 105 HOH HOH . V 12 HOH A 14 614 110 HOH HOH . V 12 HOH A 15 615 257 HOH HOH . V 12 HOH A 16 616 138 HOH HOH . V 12 HOH A 17 617 65 HOH HOH . V 12 HOH A 18 618 53 HOH HOH . V 12 HOH A 19 619 148 HOH HOH . V 12 HOH A 20 620 121 HOH HOH . V 12 HOH A 21 621 93 HOH HOH . V 12 HOH A 22 622 49 HOH HOH . V 12 HOH A 23 623 24 HOH HOH . V 12 HOH A 24 624 38 HOH HOH . V 12 HOH A 25 625 103 HOH HOH . V 12 HOH A 26 626 157 HOH HOH . V 12 HOH A 27 627 16 HOH HOH . V 12 HOH A 28 628 421 HOH HOH . V 12 HOH A 29 629 373 HOH HOH . V 12 HOH A 30 630 387 HOH HOH . V 12 HOH A 31 631 107 HOH HOH . V 12 HOH A 32 632 154 HOH HOH . V 12 HOH A 33 633 293 HOH HOH . V 12 HOH A 34 634 57 HOH HOH . V 12 HOH A 35 635 371 HOH HOH . V 12 HOH A 36 636 44 HOH HOH . V 12 HOH A 37 637 100 HOH HOH . V 12 HOH A 38 638 92 HOH HOH . V 12 HOH A 39 639 299 HOH HOH . V 12 HOH A 40 640 306 HOH HOH . V 12 HOH A 41 641 295 HOH HOH . V 12 HOH A 42 642 222 HOH HOH . V 12 HOH A 43 643 97 HOH HOH . V 12 HOH A 44 644 282 HOH HOH . V 12 HOH A 45 645 438 HOH HOH . V 12 HOH A 46 646 434 HOH HOH . V 12 HOH A 47 647 271 HOH HOH . V 12 HOH A 48 648 94 HOH HOH . V 12 HOH A 49 649 87 HOH HOH . V 12 HOH A 50 650 385 HOH HOH . V 12 HOH A 51 651 238 HOH HOH . V 12 HOH A 52 652 278 HOH HOH . V 12 HOH A 53 653 439 HOH HOH . V 12 HOH A 54 654 279 HOH HOH . V 12 HOH A 55 655 391 HOH HOH . W 12 HOH B 1 601 74 HOH HOH . W 12 HOH B 2 602 3 HOH HOH . W 12 HOH B 3 603 90 HOH HOH . W 12 HOH B 4 604 98 HOH HOH . W 12 HOH B 5 605 307 HOH HOH . W 12 HOH B 6 606 281 HOH HOH . W 12 HOH B 7 607 167 HOH HOH . W 12 HOH B 8 608 220 HOH HOH . W 12 HOH B 9 609 208 HOH HOH . W 12 HOH B 10 610 245 HOH HOH . W 12 HOH B 11 611 37 HOH HOH . W 12 HOH B 12 612 412 HOH HOH . W 12 HOH B 13 613 353 HOH HOH . W 12 HOH B 14 614 33 HOH HOH . W 12 HOH B 15 615 18 HOH HOH . W 12 HOH B 16 616 64 HOH HOH . W 12 HOH B 17 617 137 HOH HOH . W 12 HOH B 18 618 22 HOH HOH . W 12 HOH B 19 619 262 HOH HOH . W 12 HOH B 20 620 142 HOH HOH . W 12 HOH B 21 621 1 HOH HOH . W 12 HOH B 22 622 345 HOH HOH . W 12 HOH B 23 623 56 HOH HOH . W 12 HOH B 24 624 112 HOH HOH . W 12 HOH B 25 625 190 HOH HOH . W 12 HOH B 26 626 4 HOH HOH . W 12 HOH B 27 627 324 HOH HOH . W 12 HOH B 28 628 86 HOH HOH . W 12 HOH B 29 629 29 HOH HOH . W 12 HOH B 30 630 331 HOH HOH . W 12 HOH B 31 631 84 HOH HOH . W 12 HOH B 32 632 77 HOH HOH . W 12 HOH B 33 633 13 HOH HOH . W 12 HOH B 34 634 191 HOH HOH . W 12 HOH B 35 635 384 HOH HOH . W 12 HOH B 36 636 328 HOH HOH . W 12 HOH B 37 637 205 HOH HOH . W 12 HOH B 38 638 423 HOH HOH . W 12 HOH B 39 639 410 HOH HOH . W 12 HOH B 40 640 89 HOH HOH . W 12 HOH B 41 641 166 HOH HOH . W 12 HOH B 42 642 370 HOH HOH . W 12 HOH B 43 643 189 HOH HOH . W 12 HOH B 44 644 409 HOH HOH . W 12 HOH B 45 645 88 HOH HOH . W 12 HOH B 46 646 365 HOH HOH . W 12 HOH B 47 647 58 HOH HOH . W 12 HOH B 48 648 181 HOH HOH . W 12 HOH B 49 649 367 HOH HOH . W 12 HOH B 50 650 265 HOH HOH . W 12 HOH B 51 651 415 HOH HOH . W 12 HOH B 52 652 45 HOH HOH . W 12 HOH B 53 653 227 HOH HOH . W 12 HOH B 54 654 303 HOH HOH . W 12 HOH B 55 655 440 HOH HOH . W 12 HOH B 56 656 42 HOH HOH . X 12 HOH C 1 601 165 HOH HOH . X 12 HOH C 2 602 177 HOH HOH . X 12 HOH C 3 603 136 HOH HOH . X 12 HOH C 4 604 141 HOH HOH . X 12 HOH C 5 605 188 HOH HOH . X 12 HOH C 6 606 85 HOH HOH . X 12 HOH C 7 607 72 HOH HOH . X 12 HOH C 8 608 30 HOH HOH . X 12 HOH C 9 609 159 HOH HOH . X 12 HOH C 10 610 264 HOH HOH . X 12 HOH C 11 611 184 HOH HOH . X 12 HOH C 12 612 183 HOH HOH . X 12 HOH C 13 613 40 HOH HOH . X 12 HOH C 14 614 14 HOH HOH . X 12 HOH C 15 615 297 HOH HOH . X 12 HOH C 16 616 21 HOH HOH . X 12 HOH C 17 617 9 HOH HOH . X 12 HOH C 18 618 171 HOH HOH . X 12 HOH C 19 619 192 HOH HOH . X 12 HOH C 20 620 178 HOH HOH . X 12 HOH C 21 621 31 HOH HOH . X 12 HOH C 22 622 120 HOH HOH . X 12 HOH C 23 623 108 HOH HOH . X 12 HOH C 24 624 23 HOH HOH . X 12 HOH C 25 625 59 HOH HOH . X 12 HOH C 26 626 5 HOH HOH . X 12 HOH C 27 627 317 HOH HOH . X 12 HOH C 28 628 2 HOH HOH . X 12 HOH C 29 629 366 HOH HOH . X 12 HOH C 30 630 17 HOH HOH . X 12 HOH C 31 631 152 HOH HOH . X 12 HOH C 32 632 8 HOH HOH . X 12 HOH C 33 633 294 HOH HOH . X 12 HOH C 34 634 131 HOH HOH . X 12 HOH C 35 635 19 HOH HOH . X 12 HOH C 36 636 277 HOH HOH . X 12 HOH C 37 637 11 HOH HOH . X 12 HOH C 38 638 323 HOH HOH . X 12 HOH C 39 639 207 HOH HOH . X 12 HOH C 40 640 179 HOH HOH . X 12 HOH C 41 641 10 HOH HOH . X 12 HOH C 42 642 28 HOH HOH . X 12 HOH C 43 643 43 HOH HOH . X 12 HOH C 44 644 263 HOH HOH . X 12 HOH C 45 645 46 HOH HOH . X 12 HOH C 46 646 300 HOH HOH . X 12 HOH C 47 647 150 HOH HOH . X 12 HOH C 48 648 67 HOH HOH . X 12 HOH C 49 649 109 HOH HOH . X 12 HOH C 50 650 126 HOH HOH . X 12 HOH C 51 651 32 HOH HOH . X 12 HOH C 52 652 311 HOH HOH . X 12 HOH C 53 653 20 HOH HOH . X 12 HOH C 54 654 285 HOH HOH . X 12 HOH C 55 655 212 HOH HOH . X 12 HOH C 56 656 62 HOH HOH . X 12 HOH C 57 657 114 HOH HOH . X 12 HOH C 58 658 417 HOH HOH . X 12 HOH C 59 659 231 HOH HOH . X 12 HOH C 60 660 204 HOH HOH . X 12 HOH C 61 661 34 HOH HOH . X 12 HOH C 62 662 12 HOH HOH . X 12 HOH C 63 663 202 HOH HOH . X 12 HOH C 64 664 69 HOH HOH . X 12 HOH C 65 665 26 HOH HOH . X 12 HOH C 66 666 27 HOH HOH . X 12 HOH C 67 667 169 HOH HOH . X 12 HOH C 68 668 52 HOH HOH . X 12 HOH C 69 669 399 HOH HOH . X 12 HOH C 70 670 341 HOH HOH . X 12 HOH C 71 671 79 HOH HOH . X 12 HOH C 72 672 187 HOH HOH . X 12 HOH C 73 673 39 HOH HOH . X 12 HOH C 74 674 164 HOH HOH . X 12 HOH C 75 675 390 HOH HOH . X 12 HOH C 76 676 330 HOH HOH . X 12 HOH C 77 677 60 HOH HOH . X 12 HOH C 78 678 252 HOH HOH . X 12 HOH C 79 679 61 HOH HOH . X 12 HOH C 80 680 379 HOH HOH . X 12 HOH C 81 681 246 HOH HOH . X 12 HOH C 82 682 145 HOH HOH . X 12 HOH C 83 683 401 HOH HOH . X 12 HOH C 84 684 316 HOH HOH . X 12 HOH C 85 685 129 HOH HOH . X 12 HOH C 86 686 15 HOH HOH . X 12 HOH C 87 687 156 HOH HOH . X 12 HOH C 88 688 357 HOH HOH . X 12 HOH C 89 689 329 HOH HOH . X 12 HOH C 90 690 41 HOH HOH . X 12 HOH C 91 691 158 HOH HOH . X 12 HOH C 92 692 76 HOH HOH . X 12 HOH C 93 693 334 HOH HOH . X 12 HOH C 94 694 81 HOH HOH . X 12 HOH C 95 695 82 HOH HOH . X 12 HOH C 96 696 358 HOH HOH . X 12 HOH C 97 697 237 HOH HOH . X 12 HOH C 98 698 213 HOH HOH . X 12 HOH C 99 699 414 HOH HOH . X 12 HOH C 100 700 106 HOH HOH . X 12 HOH C 101 701 304 HOH HOH . X 12 HOH C 102 702 233 HOH HOH . X 12 HOH C 103 703 226 HOH HOH . X 12 HOH C 104 704 147 HOH HOH . X 12 HOH C 105 705 151 HOH HOH . X 12 HOH C 106 706 356 HOH HOH . X 12 HOH C 107 707 338 HOH HOH . X 12 HOH C 108 708 101 HOH HOH . X 12 HOH C 109 709 113 HOH HOH . X 12 HOH C 110 710 272 HOH HOH . X 12 HOH C 111 711 372 HOH HOH . X 12 HOH C 112 712 95 HOH HOH . X 12 HOH C 113 713 348 HOH HOH . X 12 HOH C 114 714 54 HOH HOH . X 12 HOH C 115 715 326 HOH HOH . X 12 HOH C 116 716 432 HOH HOH . X 12 HOH C 117 717 155 HOH HOH . X 12 HOH C 118 718 436 HOH HOH . X 12 HOH C 119 719 50 HOH HOH . X 12 HOH C 120 720 435 HOH HOH . X 12 HOH C 121 721 275 HOH HOH . X 12 HOH C 122 722 75 HOH HOH . X 12 HOH C 123 723 274 HOH HOH . X 12 HOH C 124 724 276 HOH HOH . Y 12 HOH D 1 601 425 HOH HOH . Y 12 HOH D 2 602 115 HOH HOH . Y 12 HOH D 3 603 240 HOH HOH . Y 12 HOH D 4 604 66 HOH HOH . Y 12 HOH D 5 605 249 HOH HOH . Y 12 HOH D 6 606 201 HOH HOH . Y 12 HOH D 7 607 36 HOH HOH . Y 12 HOH D 8 608 68 HOH HOH . Y 12 HOH D 9 609 163 HOH HOH . Y 12 HOH D 10 610 51 HOH HOH . Y 12 HOH D 11 611 144 HOH HOH . Y 12 HOH D 12 612 125 HOH HOH . Y 12 HOH D 13 613 314 HOH HOH . Y 12 HOH D 14 614 193 HOH HOH . Y 12 HOH D 15 615 232 HOH HOH . Y 12 HOH D 16 616 291 HOH HOH . Y 12 HOH D 17 617 280 HOH HOH . Y 12 HOH D 18 618 111 HOH HOH . Y 12 HOH D 19 619 308 HOH HOH . Y 12 HOH D 20 620 170 HOH HOH . Y 12 HOH D 21 621 337 HOH HOH . Y 12 HOH D 22 622 382 HOH HOH . Y 12 HOH D 23 623 312 HOH HOH . Y 12 HOH D 24 624 132 HOH HOH . Y 12 HOH D 25 625 429 HOH HOH . Y 12 HOH D 26 626 362 HOH HOH . Y 12 HOH D 27 627 146 HOH HOH . Y 12 HOH D 28 628 320 HOH HOH . Y 12 HOH D 29 629 301 HOH HOH . Y 12 HOH D 30 630 437 HOH HOH . Z 12 HOH E 1 201 287 HOH HOH . Z 12 HOH E 2 202 7 HOH HOH . Z 12 HOH E 3 203 253 HOH HOH . Z 12 HOH E 4 204 35 HOH HOH . Z 12 HOH E 5 205 347 HOH HOH . Z 12 HOH E 6 206 122 HOH HOH . Z 12 HOH E 7 207 186 HOH HOH . Z 12 HOH E 8 208 162 HOH HOH . Z 12 HOH E 9 209 198 HOH HOH . Z 12 HOH E 10 210 343 HOH HOH . Z 12 HOH E 11 211 80 HOH HOH . Z 12 HOH E 12 212 71 HOH HOH . Z 12 HOH E 13 213 175 HOH HOH . Z 12 HOH E 14 214 302 HOH HOH . Z 12 HOH E 15 215 214 HOH HOH . Z 12 HOH E 16 216 73 HOH HOH . Z 12 HOH E 17 217 99 HOH HOH . Z 12 HOH E 18 218 140 HOH HOH . Z 12 HOH E 19 219 325 HOH HOH . Z 12 HOH E 20 220 368 HOH HOH . Z 12 HOH E 21 221 321 HOH HOH . AA 12 HOH F 1 501 416 HOH HOH . AA 12 HOH F 2 502 174 HOH HOH . AA 12 HOH F 3 503 25 HOH HOH . AA 12 HOH F 4 504 139 HOH HOH . AA 12 HOH F 5 505 313 HOH HOH . AA 12 HOH F 6 506 143 HOH HOH . AA 12 HOH F 7 507 153 HOH HOH . AA 12 HOH F 8 508 168 HOH HOH . AA 12 HOH F 9 509 160 HOH HOH . AA 12 HOH F 10 510 261 HOH HOH . AA 12 HOH F 11 511 117 HOH HOH . AA 12 HOH F 12 512 364 HOH HOH . AA 12 HOH F 13 513 130 HOH HOH . AA 12 HOH F 14 514 284 HOH HOH . AA 12 HOH F 15 515 424 HOH HOH . AA 12 HOH F 16 516 241 HOH HOH . AA 12 HOH F 17 517 433 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . Q 8 26.221 -11.19 -43.352 1 99.44 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . Q 8 26.345 -10.46 -44.669 1 100.61 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . Q 8 25.951 -10.206 -42.238 1 116.89 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . Q 8 27.513 -11.925 -43.074 1 93.6 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . Q 8 25.041 -12.28 -43.442 1 100.09 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . Q 8 23.563 -12.012 -42.86 1 102.98 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . Q 8 22.503 -12.303 -43.894 1 110.94 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . Q 8 23.418 -10.593 -42.367 1 115.94 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . Q 8 23.47 -13.076 -41.657 1 101.34 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . Q 8 22.501 -14.117 -41.694 1 99.69 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . Q 8 21.573 -13.983 -40.5 1 85.91 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . Q 8 20.838 -12.772 -40.654 1 86.04 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . Q 8 20.563 -15.112 -40.459 1 81.4 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . Q 8 20.559 -15.668 -39.142 1 76.07 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . Q 8 19.219 -14.486 -40.777 1 82.53 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . Q 8 18.213 -15.002 -39.905 1 86.04 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . Q 8 19.435 -13.004 -40.53 1 80.97 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . Q 8 18.733 -12.117 -41.49 1 75.53 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . Q 8 19.146 -11.8 -42.729 1 74.2 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . Q 8 18.282 -10.939 -43.324 1 76.43 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . Q 8 17.296 -10.682 -42.447 1 71.53 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . Q 8 16.066 -9.857 -42.427 1 86.8 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . Q 8 15.731 -9.17 -43.416 1 101.35 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . Q 8 15.321 -9.871 -41.314 1 90.55 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . Q 8 15.653 -10.6 -40.231 1 91.26 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . Q 8 14.843 -10.559 -39.146 1 94.27 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . Q 8 16.765 -11.378 -40.18 1 79.8 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . Q 8 17.604 -11.457 -41.238 1 73.09 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #