data_6HXJ # _model_server_result.job_id zJKtreaDPMXYO3BOxJOmOA _model_server_result.datetime_utc '2024-11-28 16:48:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hxj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1004}' # _entry.id 6HXJ # _exptl.entry_id 6HXJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.65 _cell.angle_gamma 90 _cell.entry_id 6HXJ _cell.length_a 101.67 _cell.length_b 134.93 _cell.length_c 177.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HXJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 Q N N ? 5 W N N ? 5 BA N N ? 5 GA N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 370 n n C1 C2 PGE sing 371 n n C1 H1 PGE sing 372 n n C1 H12 PGE sing 373 n n O1 HO1 PGE sing 374 n n C2 O2 PGE sing 375 n n C2 H2 PGE sing 376 n n C2 H22 PGE sing 377 n n O2 C3 PGE sing 378 n n C3 C4 PGE sing 379 n n C3 H3 PGE sing 380 n n C3 H32 PGE sing 381 n n C4 O3 PGE sing 382 n n C4 H4 PGE sing 383 n n C4 H42 PGE sing 384 n n O4 C6 PGE sing 385 n n O4 HO4 PGE sing 386 n n C6 C5 PGE sing 387 n n C6 H6 PGE sing 388 n n C6 H62 PGE sing 389 n n C5 O3 PGE sing 390 n n C5 H5 PGE sing 391 n n C5 H52 PGE sing 392 n n # _atom_sites.entry_id 6HXJ _atom_sites.fract_transf_matrix[1][1] 0.009836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002028 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007411 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 FLC A 1 1001 1001 FLC FLC . J 4 COA B 1 1001 1001 COA COA . K 4 COA B 1 1002 1002 COA COA . L 3 FLC B 1 1003 1003 FLC FLC . M 5 PGE B 1 1004 1004 PGE PGE . N 6 TRS B 1 1005 1005 TRS TRS . O 3 FLC C 1 1001 1001 FLC FLC . P 7 PG4 C 1 1002 1002 PG4 PG4 . Q 5 PGE C 1 1003 1003 PGE PGE . R 4 COA D 1 1001 1001 COA COA . S 4 COA D 1 1002 1002 COA COA . T 3 FLC D 1 1003 1003 FLC FLC . U 6 TRS D 1 1004 1004 TRS TRS . V 7 PG4 D 1 1005 1005 PG4 PG4 . W 5 PGE D 1 1006 1006 PGE PGE . X 3 FLC E 1 1001 1001 FLC FLC . Y 4 COA F 1 1001 1001 COA COA . Z 4 COA F 1 1002 1002 COA COA . AA 3 FLC F 1 1003 1003 FLC FLC . BA 5 PGE F 1 1004 1004 PGE PGE . CA 3 FLC G 1 1001 1001 FLC FLC . DA 4 COA H 1 1001 1001 COA COA . EA 4 COA H 1 1002 1002 COA COA . FA 3 FLC H 1 1003 1003 FLC FLC . GA 5 PGE H 1 1004 1004 PGE PGE . HA 8 HOH A 1 1101 701 HOH HOH . HA 8 HOH A 2 1102 702 HOH HOH . HA 8 HOH A 3 1103 703 HOH HOH . IA 8 HOH B 1 1101 755 HOH HOH . IA 8 HOH B 2 1102 706 HOH HOH . IA 8 HOH B 3 1103 742 HOH HOH . IA 8 HOH B 4 1104 712 HOH HOH . IA 8 HOH B 5 1105 720 HOH HOH . IA 8 HOH B 6 1106 708 HOH HOH . IA 8 HOH B 7 1107 735 HOH HOH . IA 8 HOH B 8 1108 743 HOH HOH . IA 8 HOH B 9 1109 719 HOH HOH . IA 8 HOH B 10 1110 739 HOH HOH . IA 8 HOH B 11 1111 703 HOH HOH . IA 8 HOH B 12 1112 704 HOH HOH . IA 8 HOH B 13 1113 707 HOH HOH . IA 8 HOH B 14 1114 730 HOH HOH . IA 8 HOH B 15 1115 739 HOH HOH . IA 8 HOH B 16 1116 702 HOH HOH . IA 8 HOH B 17 1117 701 HOH HOH . IA 8 HOH B 18 1118 759 HOH HOH . IA 8 HOH B 19 1119 703 HOH HOH . IA 8 HOH B 20 1120 750 HOH HOH . IA 8 HOH B 21 1121 738 HOH HOH . IA 8 HOH B 22 1122 716 HOH HOH . IA 8 HOH B 23 1123 746 HOH HOH . IA 8 HOH B 24 1124 713 HOH HOH . IA 8 HOH B 25 1125 710 HOH HOH . IA 8 HOH B 26 1126 747 HOH HOH . IA 8 HOH B 27 1127 722 HOH HOH . IA 8 HOH B 28 1128 757 HOH HOH . IA 8 HOH B 29 1129 723 HOH HOH . IA 8 HOH B 30 1130 709 HOH HOH . IA 8 HOH B 31 1131 749 HOH HOH . IA 8 HOH B 32 1132 741 HOH HOH . IA 8 HOH B 33 1133 745 HOH HOH . IA 8 HOH B 34 1134 740 HOH HOH . IA 8 HOH B 35 1135 715 HOH HOH . IA 8 HOH B 36 1136 733 HOH HOH . IA 8 HOH B 37 1137 711 HOH HOH . IA 8 HOH B 38 1138 731 HOH HOH . IA 8 HOH B 39 1139 717 HOH HOH . IA 8 HOH B 40 1140 758 HOH HOH . IA 8 HOH B 41 1141 721 HOH HOH . IA 8 HOH B 42 1142 732 HOH HOH . IA 8 HOH B 43 1143 727 HOH HOH . IA 8 HOH B 44 1144 718 HOH HOH . IA 8 HOH B 45 1145 726 HOH HOH . IA 8 HOH B 46 1146 724 HOH HOH . IA 8 HOH B 47 1147 755 HOH HOH . IA 8 HOH B 48 1148 752 HOH HOH . IA 8 HOH B 49 1149 736 HOH HOH . IA 8 HOH B 50 1150 753 HOH HOH . IA 8 HOH B 51 1151 756 HOH HOH . IA 8 HOH B 52 1152 705 HOH HOH . IA 8 HOH B 53 1153 737 HOH HOH . IA 8 HOH B 54 1154 727 HOH HOH . IA 8 HOH B 55 1155 725 HOH HOH . IA 8 HOH B 56 1156 748 HOH HOH . IA 8 HOH B 57 1157 744 HOH HOH . IA 8 HOH B 58 1158 734 HOH HOH . IA 8 HOH B 59 1159 751 HOH HOH . IA 8 HOH B 60 1160 754 HOH HOH . IA 8 HOH B 61 1161 729 HOH HOH . JA 8 HOH C 1 1101 701 HOH HOH . JA 8 HOH C 2 1102 715 HOH HOH . JA 8 HOH C 3 1103 705 HOH HOH . JA 8 HOH C 4 1104 702 HOH HOH . JA 8 HOH C 5 1105 711 HOH HOH . JA 8 HOH C 6 1106 703 HOH HOH . JA 8 HOH C 7 1107 707 HOH HOH . JA 8 HOH C 8 1108 704 HOH HOH . JA 8 HOH C 9 1109 708 HOH HOH . JA 8 HOH C 10 1110 710 HOH HOH . JA 8 HOH C 11 1111 714 HOH HOH . JA 8 HOH C 12 1112 709 HOH HOH . JA 8 HOH C 13 1113 706 HOH HOH . JA 8 HOH C 14 1114 712 HOH HOH . JA 8 HOH C 15 1115 713 HOH HOH . KA 8 HOH D 1 1101 711 HOH HOH . KA 8 HOH D 2 1102 709 HOH HOH . KA 8 HOH D 3 1103 746 HOH HOH . KA 8 HOH D 4 1104 706 HOH HOH . KA 8 HOH D 5 1105 719 HOH HOH . KA 8 HOH D 6 1106 728 HOH HOH . KA 8 HOH D 7 1107 705 HOH HOH . KA 8 HOH D 8 1108 708 HOH HOH . KA 8 HOH D 9 1109 707 HOH HOH . KA 8 HOH D 10 1110 710 HOH HOH . KA 8 HOH D 11 1111 726 HOH HOH . KA 8 HOH D 12 1112 713 HOH HOH . KA 8 HOH D 13 1113 722 HOH HOH . KA 8 HOH D 14 1114 704 HOH HOH . KA 8 HOH D 15 1115 712 HOH HOH . KA 8 HOH D 16 1116 752 HOH HOH . KA 8 HOH D 17 1117 751 HOH HOH . KA 8 HOH D 18 1118 738 HOH HOH . KA 8 HOH D 19 1119 727 HOH HOH . KA 8 HOH D 20 1120 744 HOH HOH . KA 8 HOH D 21 1121 702 HOH HOH . KA 8 HOH D 22 1122 736 HOH HOH . KA 8 HOH D 23 1123 729 HOH HOH . KA 8 HOH D 24 1124 701 HOH HOH . KA 8 HOH D 25 1125 705 HOH HOH . KA 8 HOH D 26 1126 723 HOH HOH . KA 8 HOH D 27 1127 717 HOH HOH . KA 8 HOH D 28 1128 753 HOH HOH . KA 8 HOH D 29 1129 750 HOH HOH . KA 8 HOH D 30 1130 734 HOH HOH . KA 8 HOH D 31 1131 733 HOH HOH . KA 8 HOH D 32 1132 718 HOH HOH . KA 8 HOH D 33 1133 724 HOH HOH . KA 8 HOH D 34 1134 742 HOH HOH . KA 8 HOH D 35 1135 731 HOH HOH . KA 8 HOH D 36 1136 754 HOH HOH . KA 8 HOH D 37 1137 714 HOH HOH . KA 8 HOH D 38 1138 716 HOH HOH . KA 8 HOH D 39 1139 741 HOH HOH . KA 8 HOH D 40 1140 740 HOH HOH . KA 8 HOH D 41 1141 756 HOH HOH . KA 8 HOH D 42 1142 715 HOH HOH . KA 8 HOH D 43 1143 728 HOH HOH . KA 8 HOH D 44 1144 743 HOH HOH . KA 8 HOH D 45 1145 749 HOH HOH . KA 8 HOH D 46 1146 724 HOH HOH . KA 8 HOH D 47 1147 721 HOH HOH . KA 8 HOH D 48 1148 732 HOH HOH . KA 8 HOH D 49 1149 703 HOH HOH . KA 8 HOH D 50 1150 748 HOH HOH . KA 8 HOH D 51 1151 725 HOH HOH . KA 8 HOH D 52 1152 720 HOH HOH . KA 8 HOH D 53 1153 730 HOH HOH . KA 8 HOH D 54 1154 737 HOH HOH . KA 8 HOH D 55 1155 754 HOH HOH . KA 8 HOH D 56 1156 747 HOH HOH . KA 8 HOH D 57 1157 745 HOH HOH . KA 8 HOH D 58 1158 735 HOH HOH . LA 8 HOH E 1 1101 701 HOH HOH . LA 8 HOH E 2 1102 702 HOH HOH . LA 8 HOH E 3 1103 703 HOH HOH . LA 8 HOH E 4 1104 704 HOH HOH . LA 8 HOH E 5 1105 705 HOH HOH . MA 8 HOH F 1 1101 707 HOH HOH . MA 8 HOH F 2 1102 706 HOH HOH . MA 8 HOH F 3 1103 736 HOH HOH . MA 8 HOH F 4 1104 720 HOH HOH . MA 8 HOH F 5 1105 744 HOH HOH . MA 8 HOH F 6 1106 717 HOH HOH . MA 8 HOH F 7 1107 711 HOH HOH . MA 8 HOH F 8 1108 705 HOH HOH . MA 8 HOH F 9 1109 743 HOH HOH . MA 8 HOH F 10 1110 738 HOH HOH . MA 8 HOH F 11 1111 714 HOH HOH . MA 8 HOH F 12 1112 741 HOH HOH . MA 8 HOH F 13 1113 710 HOH HOH . MA 8 HOH F 14 1114 703 HOH HOH . MA 8 HOH F 15 1115 715 HOH HOH . MA 8 HOH F 16 1116 735 HOH HOH . MA 8 HOH F 17 1117 708 HOH HOH . MA 8 HOH F 18 1118 702 HOH HOH . MA 8 HOH F 19 1119 718 HOH HOH . MA 8 HOH F 20 1120 740 HOH HOH . MA 8 HOH F 21 1121 756 HOH HOH . MA 8 HOH F 22 1122 737 HOH HOH . MA 8 HOH F 23 1123 745 HOH HOH . MA 8 HOH F 24 1124 716 HOH HOH . MA 8 HOH F 25 1125 758 HOH HOH . MA 8 HOH F 26 1126 731 HOH HOH . MA 8 HOH F 27 1127 751 HOH HOH . MA 8 HOH F 28 1128 704 HOH HOH . MA 8 HOH F 29 1129 733 HOH HOH . MA 8 HOH F 30 1130 757 HOH HOH . MA 8 HOH F 31 1131 754 HOH HOH . MA 8 HOH F 32 1132 728 HOH HOH . MA 8 HOH F 33 1133 750 HOH HOH . MA 8 HOH F 34 1134 701 HOH HOH . MA 8 HOH F 35 1135 725 HOH HOH . MA 8 HOH F 36 1136 746 HOH HOH . MA 8 HOH F 37 1137 760 HOH HOH . MA 8 HOH F 38 1138 753 HOH HOH . MA 8 HOH F 39 1139 734 HOH HOH . MA 8 HOH F 40 1140 723 HOH HOH . MA 8 HOH F 41 1141 730 HOH HOH . MA 8 HOH F 42 1142 709 HOH HOH . MA 8 HOH F 43 1143 752 HOH HOH . MA 8 HOH F 44 1144 713 HOH HOH . MA 8 HOH F 45 1145 726 HOH HOH . MA 8 HOH F 46 1146 721 HOH HOH . MA 8 HOH F 47 1147 739 HOH HOH . MA 8 HOH F 48 1148 722 HOH HOH . MA 8 HOH F 49 1149 732 HOH HOH . MA 8 HOH F 50 1150 748 HOH HOH . MA 8 HOH F 51 1151 742 HOH HOH . MA 8 HOH F 52 1152 747 HOH HOH . MA 8 HOH F 53 1153 749 HOH HOH . MA 8 HOH F 54 1154 712 HOH HOH . MA 8 HOH F 55 1155 755 HOH HOH . MA 8 HOH F 56 1156 729 HOH HOH . MA 8 HOH F 57 1157 755 HOH HOH . MA 8 HOH F 58 1158 759 HOH HOH . MA 8 HOH F 59 1159 736 HOH HOH . MA 8 HOH F 60 1160 719 HOH HOH . NA 8 HOH G 1 1101 702 HOH HOH . NA 8 HOH G 2 1102 701 HOH HOH . OA 8 HOH H 1 1101 707 HOH HOH . OA 8 HOH H 2 1102 748 HOH HOH . OA 8 HOH H 3 1103 752 HOH HOH . OA 8 HOH H 4 1104 709 HOH HOH . OA 8 HOH H 5 1105 706 HOH HOH . OA 8 HOH H 6 1106 725 HOH HOH . OA 8 HOH H 7 1107 751 HOH HOH . OA 8 HOH H 8 1108 720 HOH HOH . OA 8 HOH H 9 1109 712 HOH HOH . OA 8 HOH H 10 1110 710 HOH HOH . OA 8 HOH H 11 1111 749 HOH HOH . OA 8 HOH H 12 1112 717 HOH HOH . OA 8 HOH H 13 1113 716 HOH HOH . OA 8 HOH H 14 1114 713 HOH HOH . OA 8 HOH H 15 1115 738 HOH HOH . OA 8 HOH H 16 1116 708 HOH HOH . OA 8 HOH H 17 1117 711 HOH HOH . OA 8 HOH H 18 1118 722 HOH HOH . OA 8 HOH H 19 1119 741 HOH HOH . OA 8 HOH H 20 1120 729 HOH HOH . OA 8 HOH H 21 1121 734 HOH HOH . OA 8 HOH H 22 1122 747 HOH HOH . OA 8 HOH H 23 1123 737 HOH HOH . OA 8 HOH H 24 1124 728 HOH HOH . OA 8 HOH H 25 1125 721 HOH HOH . OA 8 HOH H 26 1126 753 HOH HOH . OA 8 HOH H 27 1127 715 HOH HOH . OA 8 HOH H 28 1128 726 HOH HOH . OA 8 HOH H 29 1129 743 HOH HOH . OA 8 HOH H 30 1130 735 HOH HOH . OA 8 HOH H 31 1131 744 HOH HOH . OA 8 HOH H 32 1132 742 HOH HOH . OA 8 HOH H 33 1133 702 HOH HOH . OA 8 HOH H 34 1134 731 HOH HOH . OA 8 HOH H 35 1135 701 HOH HOH . OA 8 HOH H 36 1136 740 HOH HOH . OA 8 HOH H 37 1137 727 HOH HOH . OA 8 HOH H 38 1138 730 HOH HOH . OA 8 HOH H 39 1139 719 HOH HOH . OA 8 HOH H 40 1140 724 HOH HOH . OA 8 HOH H 41 1141 714 HOH HOH . OA 8 HOH H 42 1142 704 HOH HOH . OA 8 HOH H 43 1143 739 HOH HOH . OA 8 HOH H 44 1144 750 HOH HOH . OA 8 HOH H 45 1145 732 HOH HOH . OA 8 HOH H 46 1146 723 HOH HOH . OA 8 HOH H 47 1147 733 HOH HOH . OA 8 HOH H 48 1148 745 HOH HOH . OA 8 HOH H 49 1149 746 HOH HOH . OA 8 HOH H 50 1150 718 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . M 5 1.708 -25.324 -15.063 1 109.2 ? C1 PGE 1004 B 1 HETATM 2 O O1 PGE . . . M 5 1.763 -25.725 -13.688 1 106.95 ? O1 PGE 1004 B 1 HETATM 3 C C2 PGE . . . M 5 2.236 -26.399 -15.97 1 111.19 ? C2 PGE 1004 B 1 HETATM 4 O O2 PGE . . . M 5 2.027 -26.069 -17.34 1 113.36 ? O2 PGE 1004 B 1 HETATM 5 C C3 PGE . . . M 5 1.064 -26.87 -18.038 1 112.42 ? C3 PGE 1004 B 1 HETATM 6 C C4 PGE . . . M 5 1.673 -27.963 -18.883 1 111.73 ? C4 PGE 1004 B 1 HETATM 7 O O4 PGE . . . M 5 4.277 -29 -16.409 1 117.04 ? O4 PGE 1004 B 1 HETATM 8 C C6 PGE . . . M 5 3.25 -29.977 -16.671 1 116.82 ? C6 PGE 1004 B 1 HETATM 9 C C5 PGE . . . M 5 2.766 -29.945 -18.111 1 114.8 ? C5 PGE 1004 B 1 HETATM 10 O O3 PGE . . . M 5 1.541 -29.225 -18.235 1 112.62 ? O3 PGE 1004 B 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 58 _model_server_stats.query_time_ms 457 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #