data_6HXQ # _model_server_result.job_id -1d_2AeWZvT6EinjHDFNgA _model_server_result.datetime_utc '2024-11-14 20:18:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 6HXQ # _exptl.entry_id 6HXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HXQ _cell.length_a 118.495 _cell.length_b 127.029 _cell.length_c 143.797 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 340 A CYS 340 1_555 B SG CYS 409 B CYS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 C SG CYS 340 C CYS 340 1_555 D SG CYS 409 D CYS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 6HXQ _atom_sites.fract_transf_matrix[1][1] 0.008439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PGE A 1 401 450 PGE PGE . F 3 PGE A 1 402 451 PGE PGE . G 4 COA A 1 403 1000 COA COA . H 5 FLC B 1 501 450 FLC FLC . I 3 PGE C 1 401 450 PGE PGE . J 3 PGE C 1 402 451 PGE PGE . K 4 COA C 1 403 1000 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . G 4 -27.463 -55.864 21.839 1 89.01 ? N1A COA 403 A 1 HETATM 2 C C2A COA . . . G 4 -27.332 -55.056 20.782 1 88.26 ? C2A COA 403 A 1 HETATM 3 N N3A COA . . . G 4 -28.282 -54.434 20.078 1 87.21 ? N3A COA 403 A 1 HETATM 4 C C4A COA . . . G 4 -29.498 -54.696 20.576 1 89 ? C4A COA 403 A 1 HETATM 5 C C5A COA . . . G 4 -29.79 -55.481 21.679 1 88.83 ? C5A COA 403 A 1 HETATM 6 C C6A COA . . . G 4 -28.701 -56.105 22.325 1 90.36 ? C6A COA 403 A 1 HETATM 7 N N6A COA . . . G 4 -28.826 -56.936 23.367 1 93.1 ? N6A COA 403 A 1 HETATM 8 N N7A COA . . . G 4 -31.155 -55.49 21.927 1 88.43 ? N7A COA 403 A 1 HETATM 9 C C8A COA . . . G 4 -31.649 -54.728 20.982 1 89 ? C8A COA 403 A 1 HETATM 10 N N9A COA . . . G 4 -30.708 -54.246 20.106 1 92.47 ? N9A COA 403 A 1 HETATM 11 C C1B COA . . . G 4 -30.936 -53.583 18.821 1 95.74 ? C1B COA 403 A 1 HETATM 12 C C2B COA . . . G 4 -32.305 -53.849 18.191 1 96.19 ? C2B COA 403 A 1 HETATM 13 O O2B COA . . . G 4 -32.228 -55.03 17.394 1 94.45 ? O2B COA 403 A 1 HETATM 14 C C3B COA . . . G 4 -32.482 -52.598 17.331 1 98.66 ? C3B COA 403 A 1 HETATM 15 O O3B COA . . . G 4 -31.875 -52.812 16.037 1 100.73 ? O3B COA 403 A 1 HETATM 16 P P3B COA . . . G 4 -32.652 -53 14.602 1 97.64 ? P3B COA 403 A 1 HETATM 17 O O7A COA . . . G 4 -33.895 -52.057 14.563 1 98.23 ? O7A COA 403 A 1 HETATM 18 O O8A COA . . . G 4 -31.604 -52.592 13.58 1 95.11 -1 O8A COA 403 A 1 HETATM 19 O O9A COA . . . G 4 -32.989 -54.516 14.42 1 93.08 ? O9A COA 403 A 1 HETATM 20 C C4B COA . . . G 4 -31.739 -51.509 18.112 1 97.76 ? C4B COA 403 A 1 HETATM 21 O O4B COA . . . G 4 -30.823 -52.187 18.994 1 97.5 ? O4B COA 403 A 1 HETATM 22 C C5B COA . . . G 4 -32.637 -50.655 18.952 1 100.88 ? C5B COA 403 A 1 HETATM 23 O O5B COA . . . G 4 -33.197 -49.649 18.103 1 108.15 ? O5B COA 403 A 1 HETATM 24 P P1A COA . . . G 4 -34.789 -49.532 17.966 1 114.35 ? P1A COA 403 A 1 HETATM 25 O O1A COA . . . G 4 -35.52 -50.781 18.313 1 116.25 -1 O1A COA 403 A 1 HETATM 26 O O2A COA . . . G 4 -34.959 -49.076 16.493 1 114.51 ? O2A COA 403 A 1 HETATM 27 O O3A COA . . . G 4 -35.348 -48.374 18.903 1 113.3 ? O3A COA 403 A 1 HETATM 28 P P2A COA . . . G 4 -34.699 -46.95 19.181 1 113.37 ? P2A COA 403 A 1 HETATM 29 O O4A COA . . . G 4 -33.791 -46.584 18.051 1 112.9 -1 O4A COA 403 A 1 HETATM 30 O O5A COA . . . G 4 -35.856 -45.938 19.28 1 114.98 ? O5A COA 403 A 1 HETATM 31 O O6A COA . . . G 4 -33.981 -47.229 20.644 1 106.43 ? O6A COA 403 A 1 HETATM 32 C CBP COA . . . G 4 -33.488 -45.548 22.346 1 93.83 ? CBP COA 403 A 1 HETATM 33 C CCP COA . . . G 4 -34.457 -46.637 21.868 1 99.53 ? CCP COA 403 A 1 HETATM 34 C CDP COA . . . G 4 -32.341 -46.172 23.132 1 94.27 ? CDP COA 403 A 1 HETATM 35 C CEP COA . . . G 4 -32.868 -44.776 21.168 1 90.75 ? CEP COA 403 A 1 HETATM 36 C CAP COA . . . G 4 -34.294 -44.607 23.282 1 93.36 ? CAP COA 403 A 1 HETATM 37 O OAP COA . . . G 4 -34.397 -45.084 24.618 1 88.96 ? OAP COA 403 A 1 HETATM 38 C C9P COA . . . G 4 -33.83 -43.155 23.263 1 97.98 ? C9P COA 403 A 1 HETATM 39 O O9P COA . . . G 4 -34.425 -42.325 22.584 1 100.33 ? O9P COA 403 A 1 HETATM 40 N N8P COA . . . G 4 -32.708 -42.864 23.911 1 101.88 ? N8P COA 403 A 1 HETATM 41 C C7P COA . . . G 4 -31.778 -41.844 23.432 1 105.49 ? C7P COA 403 A 1 HETATM 42 C C6P COA . . . G 4 -32.083 -40.459 23.952 1 105.92 ? C6P COA 403 A 1 HETATM 43 C C5P COA . . . G 4 -30.808 -39.693 24.241 1 109.14 ? C5P COA 403 A 1 HETATM 44 O O5P COA . . . G 4 -30.06 -39.345 23.325 1 108.12 ? O5P COA 403 A 1 HETATM 45 N N4P COA . . . G 4 -30.544 -39.447 25.527 1 112.85 ? N4P COA 403 A 1 HETATM 46 C C3P COA . . . G 4 -29.4 -38.669 25.988 1 115.81 ? C3P COA 403 A 1 HETATM 47 C C2P COA . . . G 4 -29.548 -37.177 25.754 1 119.85 ? C2P COA 403 A 1 HETATM 48 S S1P COA . . . G 4 -29.58 -36.275 27.333 1 124.23 ? S1P COA 403 A 1 HETATM 49 H H2A COA . . . G 4 -26.311 -54.855 20.462 1 88.65 ? H2A COA 403 A 1 HETATM 50 H H61A COA . . . G 4 -28.016 -57.361 23.807 1 93.11 ? H61A COA 403 A 1 HETATM 51 H H62A COA . . . G 4 -29.742 -57.172 23.737 1 93.07 ? H62A COA 403 A 1 HETATM 52 H H8A COA . . . G 4 -32.707 -54.477 20.929 1 88.2 ? H8A COA 403 A 1 HETATM 53 H H1B COA . . . G 4 -30.122 -53.87 18.156 1 95.86 ? H1B COA 403 A 1 HETATM 54 H H2B COA . . . G 4 -33.14 -53.935 18.884 1 96.27 ? H2B COA 403 A 1 HETATM 55 H HO2A COA . . . G 4 -31.912 -55.775 17.97 1 94.32 ? HO2A COA 403 A 1 HETATM 56 H H3B COA . . . G 4 -33.532 -52.347 17.188 1 98.92 ? H3B COA 403 A 1 HETATM 57 H H4B COA . . . G 4 -31.097 -50.905 17.473 1 97.56 ? H4B COA 403 A 1 HETATM 58 H H51A COA . . . G 4 -32.082 -50.118 19.72 1 100.93 ? H51A COA 403 A 1 HETATM 59 H H52A COA . . . G 4 -33.387 -51.263 19.453 1 100.33 ? H52A COA 403 A 1 HETATM 60 H H121 COA . . . G 4 -34.531 -47.46 22.577 1 99.12 ? H121 COA 403 A 1 HETATM 61 H H122 COA . . . G 4 -35.471 -46.28 21.698 1 99.83 ? H122 COA 403 A 1 HETATM 62 H H131 COA . . . G 4 -31.851 -45.459 23.792 1 94.21 ? H131 COA 403 A 1 HETATM 63 H H132 COA . . . G 4 -32.694 -46.987 23.759 1 94.95 ? H132 COA 403 A 1 HETATM 64 H H133 COA . . . G 4 -31.577 -46.592 22.48 1 93.92 ? H133 COA 403 A 1 HETATM 65 H H141 COA . . . G 4 -32.372 -45.432 20.454 1 89.9 ? H141 COA 403 A 1 HETATM 66 H H142 COA . . . G 4 -32.084 -44.085 21.472 1 90.62 ? H142 COA 403 A 1 HETATM 67 H H143 COA . . . G 4 -33.601 -44.2 20.605 1 90.98 ? H143 COA 403 A 1 HETATM 68 H H10 COA . . . G 4 -35.35 -44.639 23.018 1 93.96 ? H10 COA 403 A 1 HETATM 69 H HO1 COA . . . G 4 -35.308 -44.917 24.977 1 88.06 ? HO1 COA 403 A 1 HETATM 70 H HN8 COA . . . G 4 -32.478 -43.363 24.764 1 101.89 ? HN8 COA 403 A 1 HETATM 71 H H71 COA . . . G 4 -30.751 -42.121 23.665 1 105.76 ? H71 COA 403 A 1 HETATM 72 H H72 COA . . . G 4 -31.815 -41.832 22.344 1 106 ? H72 COA 403 A 1 HETATM 73 H H61 COA . . . G 4 -32.663 -39.9 23.219 1 105.36 ? H61 COA 403 A 1 HETATM 74 H H62 COA . . . G 4 -32.728 -40.514 24.828 1 105.81 ? H62 COA 403 A 1 HETATM 75 H HN4 COA . . . G 4 -31.146 -39.811 26.259 1 112.82 ? HN4 COA 403 A 1 HETATM 76 H H31 COA . . . G 4 -28.499 -39.029 25.493 1 115.92 ? H31 COA 403 A 1 HETATM 77 H H32 COA . . . G 4 -29.233 -38.862 27.045 1 115.72 ? H32 COA 403 A 1 HETATM 78 H H21 COA . . . G 4 -28.732 -36.787 25.149 1 119.93 ? H21 COA 403 A 1 HETATM 79 H H22 COA . . . G 4 -30.46 -36.942 25.208 1 120.19 ? H22 COA 403 A 1 HETATM 80 H HS1 COA . . . G 4 -30.399 -35.277 26.978 1 124.16 ? HS1 COA 403 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 80 #