data_6HXQ # _model_server_result.job_id qX8iKJoEIvlS-QdqehSOPg _model_server_result.datetime_utc '2024-11-14 20:27:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":403}' # _entry.id 6HXQ # _exptl.entry_id 6HXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HXQ _cell.length_a 118.495 _cell.length_b 127.029 _cell.length_c 143.797 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 340 A CYS 340 1_555 B SG CYS 409 B CYS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 C SG CYS 340 C CYS 340 1_555 D SG CYS 409 D CYS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 6HXQ _atom_sites.fract_transf_matrix[1][1] 0.008439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PGE A 1 401 450 PGE PGE . F 3 PGE A 1 402 451 PGE PGE . G 4 COA A 1 403 1000 COA COA . H 5 FLC B 1 501 450 FLC FLC . I 3 PGE C 1 401 450 PGE PGE . J 3 PGE C 1 402 451 PGE PGE . K 4 COA C 1 403 1000 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . K 4 -30.061 -70.094 63.086 1 82.52 ? N1A COA 403 C 1 HETATM 2 C C2A COA . . . K 4 -30.208 -70.793 64.217 1 82.21 ? C2A COA 403 C 1 HETATM 3 N N3A COA . . . K 4 -31.326 -71.292 64.755 1 81.65 ? N3A COA 403 C 1 HETATM 4 C C4A COA . . . K 4 -32.387 -71.056 63.97 1 82.42 ? C4A COA 403 C 1 HETATM 5 C C5A COA . . . K 4 -32.394 -70.36 62.771 1 80.76 ? C5A COA 403 C 1 HETATM 6 C C6A COA . . . K 4 -31.152 -69.846 62.325 1 81.3 ? C6A COA 403 C 1 HETATM 7 N N6A COA . . . K 4 -30.985 -69.155 61.19 1 80.19 ? N6A COA 403 C 1 HETATM 8 N N7A COA . . . K 4 -33.653 -70.398 62.191 1 77.96 ? N7A COA 403 C 1 HETATM 9 C C8A COA . . . K 4 -34.361 -71.115 63.029 1 78.6 ? C8A COA 403 C 1 HETATM 10 N N9A COA . . . K 4 -33.662 -71.541 64.129 1 84.1 ? N9A COA 403 C 1 HETATM 11 C C1B COA . . . K 4 -34.132 -72.332 65.261 1 93.69 ? C1B COA 403 C 1 HETATM 12 C C2B COA . . . K 4 -35.642 -72.459 65.427 1 99.83 ? C2B COA 403 C 1 HETATM 13 O O2B COA . . . K 4 -36.212 -71.27 65.97 1 104.45 ? O2B COA 403 C 1 HETATM 14 C C3B COA . . . K 4 -35.698 -73.655 66.381 1 100.18 ? C3B COA 403 C 1 HETATM 15 O O3B COA . . . K 4 -35.42 -73.264 67.748 1 100.29 ? O3B COA 403 C 1 HETATM 16 P P3B COA . . . K 4 -36.453 -73.238 69.053 1 97.54 ? P3B COA 403 C 1 HETATM 17 O O7A COA . . . K 4 -37.655 -74.184 68.886 1 96.54 ? O7A COA 403 C 1 HETATM 18 O O8A COA . . . K 4 -35.614 -73.635 70.253 1 93.29 -1 O8A COA 403 C 1 HETATM 19 O O9A COA . . . K 4 -36.895 -71.767 69.229 1 97 ? O9A COA 403 C 1 HETATM 20 C C4B COA . . . K 4 -34.541 -74.543 65.879 1 98.33 ? C4B COA 403 C 1 HETATM 21 O O4B COA . . . K 4 -33.663 -73.66 65.135 1 96.49 ? O4B COA 403 C 1 HETATM 22 C C5B COA . . . K 4 -34.95 -75.693 64.988 1 98.89 ? C5B COA 403 C 1 HETATM 23 O O5B COA . . . K 4 -35.651 -76.721 65.727 1 100.05 ? O5B COA 403 C 1 HETATM 24 P P1A COA . . . K 4 -37.262 -77.075 65.528 1 100.11 ? P1A COA 403 C 1 HETATM 25 O O1A COA . . . K 4 -38.088 -75.996 64.937 1 100.11 -1 O1A COA 403 C 1 HETATM 26 O O2A COA . . . K 4 -37.763 -77.397 66.966 1 100.96 ? O2A COA 403 C 1 HETATM 27 O O3A COA . . . K 4 -37.501 -78.364 64.622 1 100.62 ? O3A COA 403 C 1 HETATM 28 P P2A COA . . . K 4 -36.772 -79.765 64.399 1 101.02 ? P2A COA 403 C 1 HETATM 29 O O4A COA . . . K 4 -36.067 -80.181 65.656 1 94 -1 O4A COA 403 C 1 HETATM 30 O O5A COA . . . K 4 -37.922 -80.739 64.048 1 102.28 ? O5A COA 403 C 1 HETATM 31 O O6A COA . . . K 4 -35.825 -79.494 63.022 1 96.16 ? O6A COA 403 C 1 HETATM 32 C CBP COA . . . K 4 -34.816 -81.171 61.555 1 88 ? CBP COA 403 C 1 HETATM 33 C CCP COA . . . K 4 -35.955 -80.16 61.743 1 89.19 ? CCP COA 403 C 1 HETATM 34 C CDP COA . . . K 4 -33.457 -80.468 61.617 1 83.63 ? CDP COA 403 C 1 HETATM 35 C CEP COA . . . K 4 -34.831 -82.236 62.665 1 90.38 ? CEP COA 403 C 1 HETATM 36 C CAP COA . . . K 4 -35.011 -81.833 60.163 1 91.51 ? CAP COA 403 C 1 HETATM 37 O OAP COA . . . K 4 -34.237 -81.238 59.141 1 92.38 ? OAP COA 403 C 1 HETATM 38 C C9P COA . . . K 4 -34.79 -83.339 60.08 1 94.55 ? C9P COA 403 C 1 HETATM 39 O O9P COA . . . K 4 -35.755 -84.1 60.021 1 98.19 ? O9P COA 403 C 1 HETATM 40 N N8P COA . . . K 4 -33.522 -83.755 60.062 1 94.53 ? N8P COA 403 C 1 HETATM 41 C C7P COA . . . K 4 -33.117 -85.136 60.301 1 96.92 ? C7P COA 403 C 1 HETATM 42 C C6P COA . . . K 4 -32.317 -85.687 59.134 1 100.98 ? C6P COA 403 C 1 HETATM 43 C C5P COA . . . K 4 -31.023 -86.349 59.542 1 102.27 ? C5P COA 403 C 1 HETATM 44 O O5P COA . . . K 4 -30.661 -86.406 60.713 1 101.8 ? O5P COA 403 C 1 HETATM 45 N N4P COA . . . K 4 -30.317 -86.87 58.545 1 106.64 ? N4P COA 403 C 1 HETATM 46 C C3P COA . . . K 4 -29.229 -87.818 58.749 1 114.86 ? C3P COA 403 C 1 HETATM 47 C C2P COA . . . K 4 -28.919 -88.709 57.559 1 121.73 ? C2P COA 403 C 1 HETATM 48 S S1P COA . . . K 4 -29.723 -90.336 57.69 1 126.59 ? S1P COA 403 C 1 HETATM 49 H H2A COA . . . K 4 -29.285 -71.031 64.74 1 82.29 ? H2A COA 403 C 1 HETATM 50 H H61A COA . . . K 4 -30.074 -68.799 60.917 1 79.6 ? H61A COA 403 C 1 HETATM 51 H H62A COA . . . K 4 -31.768 -68.975 60.568 1 80.3 ? H62A COA 403 C 1 HETATM 52 H H8A COA . . . K 4 -35.41 -71.354 62.861 1 78.19 ? H8A COA 403 C 1 HETATM 53 H H1B COA . . . K 4 -33.648 -71.92 66.144 1 93.83 ? H1B COA 403 C 1 HETATM 54 H H2B COA . . . K 4 -36.166 -72.702 64.504 1 99.63 ? H2B COA 403 C 1 HETATM 55 H HO2A COA . . . K 4 -35.798 -70.486 65.52 1 104.83 ? HO2A COA 403 C 1 HETATM 56 H H3B COA . . . K 4 -36.66 -74.165 66.356 1 100.61 ? H3B COA 403 C 1 HETATM 57 H H4B COA . . . K 4 -33.915 -74.89 66.7 1 98.24 ? H4B COA 403 C 1 HETATM 58 H H51A COA . . . K 4 -35.656 -75.361 64.231 1 98.88 ? H51A COA 403 C 1 HETATM 59 H H52A COA . . . K 4 -34.092 -76.098 64.452 1 98.96 ? H52A COA 403 C 1 HETATM 60 H H121 COA . . . K 4 -36.938 -80.628 61.724 1 88.76 ? H121 COA 403 C 1 HETATM 61 H H122 COA . . . K 4 -35.949 -79.392 60.972 1 88.31 ? H122 COA 403 C 1 HETATM 62 H H131 COA . . . K 4 -33.468 -79.492 61.137 1 84.08 ? H131 COA 403 C 1 HETATM 63 H H132 COA . . . K 4 -32.666 -81.043 61.139 1 83.33 ? H132 COA 403 C 1 HETATM 64 H H133 COA . . . K 4 -33.117 -80.324 62.642 1 83.09 ? H133 COA 403 C 1 HETATM 65 H H141 COA . . . K 4 -34.727 -81.789 63.652 1 90.85 ? H141 COA 403 C 1 HETATM 66 H H142 COA . . . K 4 -34 -82.937 62.604 1 90.47 ? H142 COA 403 C 1 HETATM 67 H H143 COA . . . K 4 -35.746 -82.826 62.689 1 90.65 ? H143 COA 403 C 1 HETATM 68 H H10 COA . . . K 4 -36.001 -81.579 59.786 1 91.36 ? H10 COA 403 C 1 HETATM 69 H HO1 COA . . . K 4 -34.675 -81.41 58.266 1 92.52 ? HO1 COA 403 C 1 HETATM 70 H HN8 COA . . . K 4 -32.789 -83.083 59.859 1 94.78 ? HN8 COA 403 C 1 HETATM 71 H H71 COA . . . K 4 -32.577 -85.197 61.244 1 96.58 ? H71 COA 403 C 1 HETATM 72 H H72 COA . . . K 4 -33.993 -85.76 60.463 1 96.99 ? H72 COA 403 C 1 HETATM 73 H H61 COA . . . K 4 -32.909 -86.413 58.579 1 101.21 ? H61 COA 403 C 1 HETATM 74 H H62 COA . . . K 4 -32.096 -84.894 58.422 1 101.62 ? H62 COA 403 C 1 HETATM 75 H HN4 COA . . . K 4 -30.5 -86.571 57.594 1 106.02 ? HN4 COA 403 C 1 HETATM 76 H H31 COA . . . K 4 -29.432 -88.436 59.623 1 115.04 ? H31 COA 403 C 1 HETATM 77 H H32 COA . . . K 4 -28.341 -87.246 59.011 1 115.02 ? H32 COA 403 C 1 HETATM 78 H H21 COA . . . K 4 -27.846 -88.87 57.455 1 121.97 ? H21 COA 403 C 1 HETATM 79 H H22 COA . . . K 4 -29.238 -88.264 56.619 1 122.07 ? H22 COA 403 C 1 HETATM 80 H HS1 COA . . . K 4 -29.524 -90.765 56.438 1 126.71 ? HS1 COA 403 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 80 #