data_6HY7
#
_model_server_result.job_id            nFIDzXFBnK9RgEd0Y86IQg 
_model_server_result.datetime_utc      '2024-10-18 16:25:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hy7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    6HY7 
#
_exptl.entry_id    6HY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HY7 
_cell.length_a            63.646 
_cell.length_b            82.53 
_cell.length_c            49.474 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 194 A CYS 194 1_555 A SG CYS 195 A CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf2 B SG CYS 2 B CYS 2 1_555 B SG CYS 8 B CYS 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf3 B SG CYS 3 B CYS 3 1_555 B SG CYS 12 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
covale ? covale1 A ND2 ASN 32 A ASN 32 1_555 C C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale2 A ND2 ASN 145 A ASN 145 1_555 D C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale3 B C CYS 12 B CYS 12 1_555 B N AAR 13 B AAR 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 273 n n 
C1 O1 NAG sing 274 n n 
C1 O5 NAG sing 275 n n 
C1 H1 NAG sing 276 n n 
C2 C3 NAG sing 277 n n 
C2 N2 NAG sing 278 n n 
C2 H2 NAG sing 279 n n 
C3 C4 NAG sing 280 n n 
C3 O3 NAG sing 281 n n 
C3 H3 NAG sing 282 n n 
C4 C5 NAG sing 283 n n 
C4 O4 NAG sing 284 n n 
C4 H4 NAG sing 285 n n 
C5 C6 NAG sing 286 n n 
C5 O5 NAG sing 287 n n 
C5 H5 NAG sing 288 n n 
C6 O6 NAG sing 289 n n 
C6 H61 NAG sing 290 n n 
C6 H62 NAG sing 291 n n 
C7 C8 NAG sing 292 n n 
C7 N2 NAG sing 293 n n 
C7 O7 NAG doub 294 n n 
C8 H81 NAG sing 295 n n 
C8 H82 NAG sing 296 n n 
C8 H83 NAG sing 297 n n 
N2 HN2 NAG sing 298 n n 
O1 HO1 NAG sing 299 n n 
O3 HO3 NAG sing 300 n n 
O4 HO4 NAG sing 301 n n 
O6 HO6 NAG sing 302 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6HY7 
_atom_sites.fract_transf_matrix[1][1]    0.015712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020213 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG A 1 301 1216 NAG NAG . 
D 3 NAG A 1 302 1217 NAG NAG . 
E 4 EDO A 1 303 1 EDO EDO . 
F 5 HOH A 1 401 13 HOH HOH . 
F 5 HOH A 2 402 51 HOH HOH . 
F 5 HOH A 3 403 35 HOH HOH . 
F 5 HOH A 4 404 26 HOH HOH . 
F 5 HOH A 5 405 31 HOH HOH . 
F 5 HOH A 6 406 18 HOH HOH . 
F 5 HOH A 7 407 9 HOH HOH . 
F 5 HOH A 8 408 17 HOH HOH . 
F 5 HOH A 9 409 2 HOH HOH . 
F 5 HOH A 10 410 46 HOH HOH . 
F 5 HOH A 11 411 6 HOH HOH . 
F 5 HOH A 12 412 45 HOH HOH . 
F 5 HOH A 13 413 7 HOH HOH . 
F 5 HOH A 14 414 20 HOH HOH . 
F 5 HOH A 15 415 12 HOH HOH . 
F 5 HOH A 16 416 53 HOH HOH . 
F 5 HOH A 17 417 11 HOH HOH . 
F 5 HOH A 18 418 52 HOH HOH . 
F 5 HOH A 19 419 54 HOH HOH . 
F 5 HOH A 20 420 40 HOH HOH . 
F 5 HOH A 21 421 34 HOH HOH . 
F 5 HOH A 22 422 55 HOH HOH . 
F 5 HOH A 23 423 30 HOH HOH . 
F 5 HOH A 24 424 33 HOH HOH . 
F 5 HOH A 25 425 1 HOH HOH . 
F 5 HOH A 26 426 10 HOH HOH . 
F 5 HOH A 27 427 3 HOH HOH . 
F 5 HOH A 28 428 15 HOH HOH . 
F 5 HOH A 29 429 38 HOH HOH . 
F 5 HOH A 30 430 44 HOH HOH . 
F 5 HOH A 31 431 4 HOH HOH . 
F 5 HOH A 32 432 5 HOH HOH . 
F 5 HOH A 33 433 24 HOH HOH . 
F 5 HOH A 34 434 37 HOH HOH . 
F 5 HOH A 35 435 32 HOH HOH . 
F 5 HOH A 36 436 47 HOH HOH . 
F 5 HOH A 37 437 42 HOH HOH . 
F 5 HOH A 38 438 19 HOH HOH . 
F 5 HOH A 39 439 43 HOH HOH . 
F 5 HOH A 40 440 48 HOH HOH . 
F 5 HOH A 41 441 28 HOH HOH . 
F 5 HOH A 42 442 14 HOH HOH . 
F 5 HOH A 43 443 50 HOH HOH . 
F 5 HOH A 44 444 41 HOH HOH . 
F 5 HOH A 45 445 25 HOH HOH . 
F 5 HOH A 46 446 29 HOH HOH . 
F 5 HOH A 47 447 27 HOH HOH . 
F 5 HOH A 48 448 39 HOH HOH . 
G 5 HOH B 1 101 21 HOH HOH . 
G 5 HOH B 2 102 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 3 68.411 33.281 69.175 1 38.87 ? C1 NAG 301 A 1 
HETATM 2 C C2 NAG . . . C 3 68.403 33.259 70.697 1 51.42 ? C2 NAG 301 A 1 
HETATM 3 C C3 NAG . . . C 3 68.225 34.678 71.245 1 49.69 ? C3 NAG 301 A 1 
HETATM 4 C C4 NAG . . . C 3 69.286 35.609 70.684 1 56.27 ? C4 NAG 301 A 1 
HETATM 5 C C5 NAG . . . C 3 69.335 35.558 69.163 1 56.98 ? C5 NAG 301 A 1 
HETATM 6 C C6 NAG . . . C 3 70.571 36.249 68.638 1 46.85 ? C6 NAG 301 A 1 
HETATM 7 C C7 NAG . . . C 3 67.582 31.128 71.621 1 52.44 ? C7 NAG 301 A 1 
HETATM 8 C C8 NAG . . . C 3 66.385 30.381 72.128 1 47.85 ? C8 NAG 301 A 1 
HETATM 9 N N2 NAG . . . C 3 67.36 32.381 71.208 1 56.67 ? N2 NAG 301 A 1 
HETATM 10 O O3 NAG . . . C 3 68.362 34.666 72.662 1 58.99 ? O3 NAG 301 A 1 
HETATM 11 O O4 NAG . . . C 3 69.032 36.95 71.086 1 63.05 ? O4 NAG 301 A 1 
HETATM 12 O O5 NAG . . . C 3 69.417 34.198 68.707 1 49.77 ? O5 NAG 301 A 1 
HETATM 13 O O6 NAG . . . C 3 70.608 36.267 67.222 1 61.79 ? O6 NAG 301 A 1 
HETATM 14 O O7 NAG . . . C 3 68.696 30.617 71.581 1 61.58 ? O7 NAG 301 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#