data_6HY7
#
_model_server_result.job_id            iztAMWLrgOUWGIGt0FRweQ 
_model_server_result.datetime_utc      '2024-10-18 16:21:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hy7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    6HY7 
#
_exptl.entry_id    6HY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HY7 
_cell.length_a            63.646 
_cell.length_b            82.53 
_cell.length_c            49.474 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 194 A CYS 194 1_555 A SG CYS 195 A CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf2 B SG CYS 2 B CYS 2 1_555 B SG CYS 8 B CYS 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf3 B SG CYS 3 B CYS 3 1_555 B SG CYS 12 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
covale ? covale1 A ND2 ASN 32 A ASN 32 1_555 C C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale2 A ND2 ASN 145 A ASN 145 1_555 D C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale3 B C CYS 12 B CYS 12 1_555 B N AAR 13 B AAR 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 110 n n 
C1 C2 EDO sing 111 n n 
C1 H11 EDO sing 112 n n 
C1 H12 EDO sing 113 n n 
O1 HO1 EDO sing 114 n n 
C2 O2 EDO sing 115 n n 
C2 H21 EDO sing 116 n n 
C2 H22 EDO sing 117 n n 
O2 HO2 EDO sing 118 n n 
#
_atom_sites.entry_id                     6HY7 
_atom_sites.fract_transf_matrix[1][1]    0.015712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020213 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG A 1 301 1216 NAG NAG . 
D 3 NAG A 1 302 1217 NAG NAG . 
E 4 EDO A 1 303 1 EDO EDO . 
F 5 HOH A 1 401 13 HOH HOH . 
F 5 HOH A 2 402 51 HOH HOH . 
F 5 HOH A 3 403 35 HOH HOH . 
F 5 HOH A 4 404 26 HOH HOH . 
F 5 HOH A 5 405 31 HOH HOH . 
F 5 HOH A 6 406 18 HOH HOH . 
F 5 HOH A 7 407 9 HOH HOH . 
F 5 HOH A 8 408 17 HOH HOH . 
F 5 HOH A 9 409 2 HOH HOH . 
F 5 HOH A 10 410 46 HOH HOH . 
F 5 HOH A 11 411 6 HOH HOH . 
F 5 HOH A 12 412 45 HOH HOH . 
F 5 HOH A 13 413 7 HOH HOH . 
F 5 HOH A 14 414 20 HOH HOH . 
F 5 HOH A 15 415 12 HOH HOH . 
F 5 HOH A 16 416 53 HOH HOH . 
F 5 HOH A 17 417 11 HOH HOH . 
F 5 HOH A 18 418 52 HOH HOH . 
F 5 HOH A 19 419 54 HOH HOH . 
F 5 HOH A 20 420 40 HOH HOH . 
F 5 HOH A 21 421 34 HOH HOH . 
F 5 HOH A 22 422 55 HOH HOH . 
F 5 HOH A 23 423 30 HOH HOH . 
F 5 HOH A 24 424 33 HOH HOH . 
F 5 HOH A 25 425 1 HOH HOH . 
F 5 HOH A 26 426 10 HOH HOH . 
F 5 HOH A 27 427 3 HOH HOH . 
F 5 HOH A 28 428 15 HOH HOH . 
F 5 HOH A 29 429 38 HOH HOH . 
F 5 HOH A 30 430 44 HOH HOH . 
F 5 HOH A 31 431 4 HOH HOH . 
F 5 HOH A 32 432 5 HOH HOH . 
F 5 HOH A 33 433 24 HOH HOH . 
F 5 HOH A 34 434 37 HOH HOH . 
F 5 HOH A 35 435 32 HOH HOH . 
F 5 HOH A 36 436 47 HOH HOH . 
F 5 HOH A 37 437 42 HOH HOH . 
F 5 HOH A 38 438 19 HOH HOH . 
F 5 HOH A 39 439 43 HOH HOH . 
F 5 HOH A 40 440 48 HOH HOH . 
F 5 HOH A 41 441 28 HOH HOH . 
F 5 HOH A 42 442 14 HOH HOH . 
F 5 HOH A 43 443 50 HOH HOH . 
F 5 HOH A 44 444 41 HOH HOH . 
F 5 HOH A 45 445 25 HOH HOH . 
F 5 HOH A 46 446 29 HOH HOH . 
F 5 HOH A 47 447 27 HOH HOH . 
F 5 HOH A 48 448 39 HOH HOH . 
G 5 HOH B 1 101 21 HOH HOH . 
G 5 HOH B 2 102 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 4 48.514 39.367 56.832 1 60.75 ? C1 EDO 303 A 1 
HETATM 2 O O1 EDO . . . E 4 48.642 39.648 58.251 1 56.39 ? O1 EDO 303 A 1 
HETATM 3 C C2 EDO . . . E 4 48.838 37.9 56.431 1 55.25 ? C2 EDO 303 A 1 
HETATM 4 O O2 EDO . . . E 4 49.272 37.031 57.524 1 57.06 ? O2 EDO 303 A 1 
HETATM 5 H H11 EDO . . . E 4 47.493 39.598 56.52 1 72.75 ? H11 EDO 303 A 1 
HETATM 6 H H12 EDO . . . E 4 49.178 40.035 56.281 1 72.75 ? H12 EDO 303 A 1 
HETATM 7 H HO1 EDO . . . E 4 48.424 40.575 58.416 1 67.52 ? HO1 EDO 303 A 1 
HETATM 8 H H21 EDO . . . E 4 47.949 37.461 55.972 1 66.15 ? H21 EDO 303 A 1 
HETATM 9 H H22 EDO . . . E 4 49.618 37.913 55.668 1 66.15 ? H22 EDO 303 A 1 
HETATM 10 H HO2 EDO . . . E 4 49.45 36.144 57.18 1 68.33 ? HO2 EDO 303 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#