data_6HYC # _model_server_result.job_id 1oLoMD65Wl37Ilg2ktn23Q _model_server_result.datetime_utc '2024-11-26 20:54:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hyc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 6HYC # _exptl.entry_id 6HYC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6HYC _cell.length_a 101.94 _cell.length_b 101.368 _cell.length_c 203.543 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HYC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I 1 1,2 B,D,G,H,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 203.543 3 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 129 n y N1 C8A H4B sing 130 n y C2 N2 H4B sing 131 n n C2 N3 H4B sing 132 n y N2 HN21 H4B sing 133 n n N2 HN22 H4B sing 134 n n N3 C4 H4B sing 135 n y N3 HN3 H4B sing 136 n n C4 O4 H4B doub 137 n n C4 C4A H4B sing 138 n y C4A C8A H4B doub 139 n y C4A N5 H4B sing 140 n n C8A N8 H4B sing 141 n n N5 C6 H4B sing 142 n n N5 HN5 H4B sing 143 n n N8 C7 H4B sing 144 n n N8 HN8 H4B sing 145 n n C6 C7 H4B sing 146 n n C6 C9 H4B sing 147 n n C6 H6 H4B sing 148 n n C7 H71 H4B sing 149 n n C7 H72 H4B sing 150 n n C9 O9 H4B sing 151 n n C9 C10 H4B sing 152 n n C9 H9 H4B sing 153 n n O9 HO9 H4B sing 154 n n C10 C11 H4B sing 155 n n C10 O10 H4B sing 156 n n C10 H10 H4B sing 157 n n C11 H111 H4B sing 158 n n C11 H112 H4B sing 159 n n C11 H113 H4B sing 160 n n O10 HO0 H4B sing 161 n n # _atom_sites.entry_id 6HYC _atom_sites.fract_transf_matrix[1][1] 0.00981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 H4B D 1 501 3 H4B H4B . F 2 H4B C 1 501 2 H4B H4B . G 2 H4B B 1 501 1 H4B H4B . H 3 HOH A 1 501 3 HOH HOH . I 3 HOH C 1 601 6 HOH HOH . I 3 HOH C 2 602 2 HOH HOH . I 3 HOH C 3 603 8 HOH HOH . J 3 HOH B 1 601 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . G 2 -3.923 -1.402 31.254 0.88 95.34 ? N1 H4B 501 B 1 HETATM 2 C C2 H4B . . . G 2 -2.719 -1.143 31.825 0.88 96.31 ? C2 H4B 501 B 1 HETATM 3 N N2 H4B . . . G 2 -2.691 -0.535 33.035 0.88 84.27 ? N2 H4B 501 B 1 HETATM 4 N N3 H4B . . . G 2 -1.551 -1.466 31.239 0.88 106.46 ? N3 H4B 501 B 1 HETATM 5 C C4 H4B . . . G 2 -1.495 -2.069 30.045 0.88 106.85 ? C4 H4B 501 B 1 HETATM 6 O O4 H4B . . . G 2 -0.396 -2.357 29.524 0.88 108.31 ? O4 H4B 501 B 1 HETATM 7 C C4A H4B . . . G 2 -2.767 -2.385 29.359 0.88 99.43 ? C4A H4B 501 B 1 HETATM 8 C C8A H4B . . . G 2 -4.013 -2.006 30.05 0.88 98.37 ? C8A H4B 501 B 1 HETATM 9 N N5 H4B . . . G 2 -2.816 -2.989 28.154 0.88 88.72 ? N5 H4B 501 B 1 HETATM 10 N N8 H4B . . . G 2 -5.202 -2.27 29.47 0.88 102.01 ? N8 H4B 501 B 1 HETATM 11 C C6 H4B . . . G 2 -4.062 -2.961 27.41 0.88 94.64 ? C6 H4B 501 B 1 HETATM 12 C C7 H4B . . . G 2 -5.25 -3.185 28.344 0.88 98.83 ? C7 H4B 501 B 1 HETATM 13 C C9 H4B . . . G 2 -4.031 -4.01 26.305 0.88 95.04 ? C9 H4B 501 B 1 HETATM 14 O O9 H4B . . . G 2 -4.511 -5.258 26.818 0.88 100.75 ? O9 H4B 501 B 1 HETATM 15 C C10 H4B . . . G 2 -4.891 -3.583 25.122 0.88 91.24 ? C10 H4B 501 B 1 HETATM 16 C C11 H4B . . . G 2 -4.524 -2.178 24.658 0.88 81.25 ? C11 H4B 501 B 1 HETATM 17 O O10 H4B . . . G 2 -6.272 -3.614 25.5 0.88 106.1 ? O10 H4B 501 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #