data_6HYM
#
_model_server_result.job_id            WcSbyUj8IlN8uOYnZe1pDQ 
_model_server_result.datetime_utc      '2024-11-04 20:25:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hym 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6HYM 
#
_exptl.entry_id    6HYM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HYM 
_cell.length_a            80.873 
_cell.length_b            80.873 
_cell.length_c            55.19 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HYM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 125 n n 
C1 C2 GOL sing 126 n n 
C1 H11 GOL sing 127 n n 
C1 H12 GOL sing 128 n n 
O1 HO1 GOL sing 129 n n 
C2 O2 GOL sing 130 n n 
C2 C3 GOL sing 131 n n 
C2 H2 GOL sing 132 n n 
O2 HO2 GOL sing 133 n n 
C3 O3 GOL sing 134 n n 
C3 H31 GOL sing 135 n n 
C3 H32 GOL sing 136 n n 
O3 HO3 GOL sing 137 n n 
#
_atom_sites.entry_id                     6HYM 
_atom_sites.fract_transf_matrix[1][1]    0.012365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018119 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 201 1 GOL GOL . 
D 2 GOL A 1 202 3 GOL GOL . 
E 2 GOL A 1 203 4 GOL GOL . 
F 2 GOL B 1 201 2 GOL GOL . 
G 3 EDO B 1 202 1 EDO EDO . 
H 4 HOH A 1 301 82 HOH HOH . 
H 4 HOH A 2 302 205 HOH HOH . 
H 4 HOH A 3 303 36 HOH HOH . 
H 4 HOH A 4 304 17 HOH HOH . 
H 4 HOH A 5 305 207 HOH HOH . 
H 4 HOH A 6 306 144 HOH HOH . 
H 4 HOH A 7 307 85 HOH HOH . 
H 4 HOH A 8 308 54 HOH HOH . 
H 4 HOH A 9 309 42 HOH HOH . 
H 4 HOH A 10 310 7 HOH HOH . 
H 4 HOH A 11 311 2 HOH HOH . 
H 4 HOH A 12 312 128 HOH HOH . 
H 4 HOH A 13 313 26 HOH HOH . 
H 4 HOH A 14 314 182 HOH HOH . 
H 4 HOH A 15 315 157 HOH HOH . 
H 4 HOH A 16 316 9 HOH HOH . 
H 4 HOH A 17 317 15 HOH HOH . 
H 4 HOH A 18 318 28 HOH HOH . 
H 4 HOH A 19 319 83 HOH HOH . 
H 4 HOH A 20 320 89 HOH HOH . 
H 4 HOH A 21 321 20 HOH HOH . 
H 4 HOH A 22 322 93 HOH HOH . 
H 4 HOH A 23 323 1 HOH HOH . 
H 4 HOH A 24 324 55 HOH HOH . 
H 4 HOH A 25 325 29 HOH HOH . 
H 4 HOH A 26 326 159 HOH HOH . 
H 4 HOH A 27 327 40 HOH HOH . 
H 4 HOH A 28 328 62 HOH HOH . 
H 4 HOH A 29 329 95 HOH HOH . 
H 4 HOH A 30 330 6 HOH HOH . 
H 4 HOH A 31 331 31 HOH HOH . 
H 4 HOH A 32 332 4 HOH HOH . 
H 4 HOH A 33 333 61 HOH HOH . 
H 4 HOH A 34 334 111 HOH HOH . 
H 4 HOH A 35 335 41 HOH HOH . 
H 4 HOH A 36 336 175 HOH HOH . 
H 4 HOH A 37 337 133 HOH HOH . 
H 4 HOH A 38 338 178 HOH HOH . 
H 4 HOH A 39 339 38 HOH HOH . 
H 4 HOH A 40 340 118 HOH HOH . 
H 4 HOH A 41 341 74 HOH HOH . 
H 4 HOH A 42 342 25 HOH HOH . 
H 4 HOH A 43 343 98 HOH HOH . 
H 4 HOH A 44 344 181 HOH HOH . 
H 4 HOH A 45 345 103 HOH HOH . 
H 4 HOH A 46 346 12 HOH HOH . 
H 4 HOH A 47 347 35 HOH HOH . 
H 4 HOH A 48 348 56 HOH HOH . 
H 4 HOH A 49 349 45 HOH HOH . 
H 4 HOH A 50 350 123 HOH HOH . 
H 4 HOH A 51 351 86 HOH HOH . 
H 4 HOH A 52 352 145 HOH HOH . 
H 4 HOH A 53 353 154 HOH HOH . 
H 4 HOH A 54 354 21 HOH HOH . 
H 4 HOH A 55 355 135 HOH HOH . 
H 4 HOH A 56 356 162 HOH HOH . 
H 4 HOH A 57 357 136 HOH HOH . 
H 4 HOH A 58 358 18 HOH HOH . 
H 4 HOH A 59 359 96 HOH HOH . 
H 4 HOH A 60 360 172 HOH HOH . 
H 4 HOH A 61 361 129 HOH HOH . 
H 4 HOH A 62 362 125 HOH HOH . 
H 4 HOH A 63 363 216 HOH HOH . 
H 4 HOH A 64 364 50 HOH HOH . 
H 4 HOH A 65 365 131 HOH HOH . 
H 4 HOH A 66 366 84 HOH HOH . 
H 4 HOH A 67 367 24 HOH HOH . 
H 4 HOH A 68 368 58 HOH HOH . 
H 4 HOH A 69 369 119 HOH HOH . 
H 4 HOH A 70 370 212 HOH HOH . 
H 4 HOH A 71 371 92 HOH HOH . 
H 4 HOH A 72 372 217 HOH HOH . 
H 4 HOH A 73 373 169 HOH HOH . 
H 4 HOH A 74 374 201 HOH HOH . 
H 4 HOH A 75 375 130 HOH HOH . 
H 4 HOH A 76 376 87 HOH HOH . 
H 4 HOH A 77 377 137 HOH HOH . 
H 4 HOH A 78 378 22 HOH HOH . 
H 4 HOH A 79 379 174 HOH HOH . 
H 4 HOH A 80 380 117 HOH HOH . 
H 4 HOH A 81 381 167 HOH HOH . 
H 4 HOH A 82 382 143 HOH HOH . 
H 4 HOH A 83 383 139 HOH HOH . 
H 4 HOH A 84 384 122 HOH HOH . 
H 4 HOH A 85 385 104 HOH HOH . 
H 4 HOH A 86 386 209 HOH HOH . 
H 4 HOH A 87 387 113 HOH HOH . 
H 4 HOH A 88 388 206 HOH HOH . 
H 4 HOH A 89 389 203 HOH HOH . 
H 4 HOH A 90 390 164 HOH HOH . 
H 4 HOH A 91 391 204 HOH HOH . 
H 4 HOH A 92 392 171 HOH HOH . 
H 4 HOH A 93 393 208 HOH HOH . 
H 4 HOH A 94 394 191 HOH HOH . 
H 4 HOH A 95 395 142 HOH HOH . 
H 4 HOH A 96 396 179 HOH HOH . 
H 4 HOH A 97 397 215 HOH HOH . 
H 4 HOH A 98 398 166 HOH HOH . 
H 4 HOH A 99 399 214 HOH HOH . 
H 4 HOH A 100 400 173 HOH HOH . 
H 4 HOH A 101 401 213 HOH HOH . 
H 4 HOH A 102 402 189 HOH HOH . 
H 4 HOH A 103 403 180 HOH HOH . 
H 4 HOH A 104 404 163 HOH HOH . 
H 4 HOH A 105 405 69 HOH HOH . 
H 4 HOH A 106 406 152 HOH HOH . 
H 4 HOH A 107 407 177 HOH HOH . 
H 4 HOH A 108 408 134 HOH HOH . 
H 4 HOH A 109 409 190 HOH HOH . 
H 4 HOH A 110 410 202 HOH HOH . 
H 4 HOH A 111 411 68 HOH HOH . 
H 4 HOH A 112 412 70 HOH HOH . 
I 4 HOH B 1 301 105 HOH HOH . 
I 4 HOH B 2 302 75 HOH HOH . 
I 4 HOH B 3 303 79 HOH HOH . 
I 4 HOH B 4 304 94 HOH HOH . 
I 4 HOH B 5 305 90 HOH HOH . 
I 4 HOH B 6 306 218 HOH HOH . 
I 4 HOH B 7 307 112 HOH HOH . 
I 4 HOH B 8 308 3 HOH HOH . 
I 4 HOH B 9 309 27 HOH HOH . 
I 4 HOH B 10 310 16 HOH HOH . 
I 4 HOH B 11 311 146 HOH HOH . 
I 4 HOH B 12 312 34 HOH HOH . 
I 4 HOH B 13 313 101 HOH HOH . 
I 4 HOH B 14 314 14 HOH HOH . 
I 4 HOH B 15 315 91 HOH HOH . 
I 4 HOH B 16 316 100 HOH HOH . 
I 4 HOH B 17 317 102 HOH HOH . 
I 4 HOH B 18 318 59 HOH HOH . 
I 4 HOH B 19 319 132 HOH HOH . 
I 4 HOH B 20 320 8 HOH HOH . 
I 4 HOH B 21 321 109 HOH HOH . 
I 4 HOH B 22 322 47 HOH HOH . 
I 4 HOH B 23 323 195 HOH HOH . 
I 4 HOH B 24 324 11 HOH HOH . 
I 4 HOH B 25 325 88 HOH HOH . 
I 4 HOH B 26 326 127 HOH HOH . 
I 4 HOH B 27 327 48 HOH HOH . 
I 4 HOH B 28 328 32 HOH HOH . 
I 4 HOH B 29 329 99 HOH HOH . 
I 4 HOH B 30 330 116 HOH HOH . 
I 4 HOH B 31 331 170 HOH HOH . 
I 4 HOH B 32 332 188 HOH HOH . 
I 4 HOH B 33 333 13 HOH HOH . 
I 4 HOH B 34 334 52 HOH HOH . 
I 4 HOH B 35 335 158 HOH HOH . 
I 4 HOH B 36 336 219 HOH HOH . 
I 4 HOH B 37 337 108 HOH HOH . 
I 4 HOH B 38 338 126 HOH HOH . 
I 4 HOH B 39 339 210 HOH HOH . 
I 4 HOH B 40 340 33 HOH HOH . 
I 4 HOH B 41 341 211 HOH HOH . 
I 4 HOH B 42 342 115 HOH HOH . 
I 4 HOH B 43 343 10 HOH HOH . 
I 4 HOH B 44 344 57 HOH HOH . 
I 4 HOH B 45 345 97 HOH HOH . 
I 4 HOH B 46 346 106 HOH HOH . 
I 4 HOH B 47 347 30 HOH HOH . 
I 4 HOH B 48 348 110 HOH HOH . 
I 4 HOH B 49 349 39 HOH HOH . 
I 4 HOH B 50 350 37 HOH HOH . 
I 4 HOH B 51 351 66 HOH HOH . 
I 4 HOH B 52 352 184 HOH HOH . 
I 4 HOH B 53 353 114 HOH HOH . 
I 4 HOH B 54 354 76 HOH HOH . 
I 4 HOH B 55 355 140 HOH HOH . 
I 4 HOH B 56 356 107 HOH HOH . 
I 4 HOH B 57 357 121 HOH HOH . 
I 4 HOH B 58 358 186 HOH HOH . 
I 4 HOH B 59 359 198 HOH HOH . 
I 4 HOH B 60 360 183 HOH HOH . 
I 4 HOH B 61 361 147 HOH HOH . 
I 4 HOH B 62 362 223 HOH HOH . 
I 4 HOH B 63 363 226 HOH HOH . 
I 4 HOH B 64 364 168 HOH HOH . 
I 4 HOH B 65 365 141 HOH HOH . 
I 4 HOH B 66 366 222 HOH HOH . 
I 4 HOH B 67 367 225 HOH HOH . 
I 4 HOH B 68 368 138 HOH HOH . 
I 4 HOH B 69 369 196 HOH HOH . 
I 4 HOH B 70 370 220 HOH HOH . 
I 4 HOH B 71 371 197 HOH HOH . 
I 4 HOH B 72 372 148 HOH HOH . 
I 4 HOH B 73 373 185 HOH HOH . 
I 4 HOH B 74 374 221 HOH HOH . 
I 4 HOH B 75 375 200 HOH HOH . 
I 4 HOH B 76 376 193 HOH HOH . 
I 4 HOH B 77 377 150 HOH HOH . 
I 4 HOH B 78 378 224 HOH HOH . 
I 4 HOH B 79 379 60 HOH HOH . 
I 4 HOH B 80 380 199 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 5.733 88.323 -10.065 1 47.99 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . C 2 5.922 88.736 -11.41 1 47.86 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . C 2 6.844 87.248 -9.804 1 48.36 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . C 2 6.73 86.191 -10.663 1 47.36 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . C 2 6.782 86.82 -8.28 1 51.37 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . C 2 7.733 85.747 -8.158 1 50.2 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#