data_6HYV # _model_server_result.job_id iAIJqhBoxWNeLepx6imT1g _model_server_result.datetime_utc '2024-11-04 22:34:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":410}' # _entry.id 6HYV # _exptl.entry_id 6HYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.22 _cell.angle_gamma 90 _cell.entry_id 6HYV _cell.length_a 180.81 _cell.length_b 132.38 _cell.length_c 159.65 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 O N N ? 3 R N N ? 3 W N N ? 3 AA N N ? 3 FA N N ? 3 IA N N ? 3 NA N N ? 3 QA N N ? 3 VA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 71 A ILE 71 1_555 M NA NA . A NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc2 B O ILE 71 B ILE 71 1_555 V NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 C O PRO 68 C PRO 68 1_555 EA NA NA . C NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc4 C O ILE 71 C ILE 71 1_555 EA NA NA . C NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc5 D O PRO 68 D PRO 68 1_555 MA NA NA . D NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc6 D O ILE 71 D ILE 71 1_555 MA NA NA . D NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc7 E O PRO 68 E PRO 68 1_555 UA NA NA . E NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.101 ? metalc ? metalc8 E O ILE 71 E ILE 71 1_555 UA NA NA . E NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6HYV _atom_sites.fract_transf_matrix[1][1] 0.005531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001198 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LMT A 1 401 320 LMT LMT . G 3 ACT A 1 402 401 ACT ACT . H 4 PLC A 1 403 402 PLC PLC . I 4 PLC A 1 404 403 PLC PLC . J 5 CL A 1 405 405 CL CL . K 5 CL A 1 406 406 CL CL . L 5 CL A 1 407 407 CL CL . M 6 NA A 1 408 408 NA NA . N 6 NA A 1 409 409 NA NA . O 3 ACT A 1 410 410 ACT ACT . P 2 LMT A 1 411 412 LMT LMT . Q 2 LMT B 1 401 320 LMT LMT . R 3 ACT B 1 402 401 ACT ACT . S 4 PLC B 1 403 402 PLC PLC . T 4 PLC B 1 404 403 PLC PLC . U 5 CL B 1 405 405 CL CL . V 6 NA B 1 406 406 NA NA . W 3 ACT B 1 407 407 ACT ACT . X 2 LMT B 1 408 408 LMT LMT . Y 2 LMT C 1 401 411 LMT LMT . Z 2 LMT C 1 402 320 LMT LMT . AA 3 ACT C 1 403 401 ACT ACT . BA 4 PLC C 1 404 402 PLC PLC . CA 4 PLC C 1 405 403 PLC PLC . DA 5 CL C 1 406 405 CL CL . EA 6 NA C 1 407 406 NA NA . FA 3 ACT C 1 408 407 ACT ACT . GA 2 LMT C 1 409 408 LMT LMT . HA 2 LMT D 1 401 320 LMT LMT . IA 3 ACT D 1 402 401 ACT ACT . JA 4 PLC D 1 403 402 PLC PLC . KA 4 PLC D 1 404 403 PLC PLC . LA 5 CL D 1 405 405 CL CL . MA 6 NA D 1 406 406 NA NA . NA 3 ACT D 1 407 407 ACT ACT . OA 2 LMT D 1 408 408 LMT LMT . PA 2 LMT E 1 401 320 LMT LMT . QA 3 ACT E 1 402 401 ACT ACT . RA 4 PLC E 1 403 402 PLC PLC . SA 4 PLC E 1 404 403 PLC PLC . TA 5 CL E 1 405 405 CL CL . UA 6 NA E 1 406 406 NA NA . VA 3 ACT E 1 407 407 ACT ACT . WA 2 LMT E 1 408 408 LMT LMT . XA 7 HOH A 1 501 45 HOH HOH . XA 7 HOH A 2 502 559 HOH HOH . XA 7 HOH A 3 503 414 HOH HOH . XA 7 HOH A 4 504 147 HOH HOH . XA 7 HOH A 5 505 180 HOH HOH . XA 7 HOH A 6 506 179 HOH HOH . XA 7 HOH A 7 507 168 HOH HOH . XA 7 HOH A 8 508 24 HOH HOH . XA 7 HOH A 9 509 49 HOH HOH . XA 7 HOH A 10 510 94 HOH HOH . XA 7 HOH A 11 511 115 HOH HOH . XA 7 HOH A 12 512 140 HOH HOH . XA 7 HOH A 13 513 92 HOH HOH . XA 7 HOH A 14 514 145 HOH HOH . XA 7 HOH A 15 515 579 HOH HOH . XA 7 HOH A 16 516 8 HOH HOH . XA 7 HOH A 17 517 116 HOH HOH . XA 7 HOH A 18 518 205 HOH HOH . XA 7 HOH A 19 519 501 HOH HOH . XA 7 HOH A 20 520 38 HOH HOH . XA 7 HOH A 21 521 171 HOH HOH . XA 7 HOH A 22 522 565 HOH HOH . XA 7 HOH A 23 523 503 HOH HOH . YA 7 HOH B 1 501 566 HOH HOH . YA 7 HOH B 2 502 117 HOH HOH . YA 7 HOH B 3 503 146 HOH HOH . YA 7 HOH B 4 504 504 HOH HOH . YA 7 HOH B 5 505 166 HOH HOH . YA 7 HOH B 6 506 20 HOH HOH . YA 7 HOH B 7 507 512 HOH HOH . YA 7 HOH B 8 508 560 HOH HOH . YA 7 HOH B 9 509 52 HOH HOH . YA 7 HOH B 10 510 528 HOH HOH . YA 7 HOH B 11 511 19 HOH HOH . YA 7 HOH B 12 512 111 HOH HOH . YA 7 HOH B 13 513 622 HOH HOH . YA 7 HOH B 14 514 97 HOH HOH . YA 7 HOH B 15 515 26 HOH HOH . YA 7 HOH B 16 516 33 HOH HOH . YA 7 HOH B 17 517 71 HOH HOH . YA 7 HOH B 18 518 194 HOH HOH . YA 7 HOH B 19 519 114 HOH HOH . YA 7 HOH B 20 520 412 HOH HOH . YA 7 HOH B 21 521 186 HOH HOH . YA 7 HOH B 22 522 197 HOH HOH . YA 7 HOH B 23 523 105 HOH HOH . ZA 7 HOH C 1 501 110 HOH HOH . ZA 7 HOH C 2 502 163 HOH HOH . ZA 7 HOH C 3 503 129 HOH HOH . ZA 7 HOH C 4 504 132 HOH HOH . ZA 7 HOH C 5 505 164 HOH HOH . ZA 7 HOH C 6 506 550 HOH HOH . ZA 7 HOH C 7 507 22 HOH HOH . ZA 7 HOH C 8 508 177 HOH HOH . ZA 7 HOH C 9 509 21 HOH HOH . ZA 7 HOH C 10 510 551 HOH HOH . ZA 7 HOH C 11 511 35 HOH HOH . ZA 7 HOH C 12 512 510 HOH HOH . ZA 7 HOH C 13 513 128 HOH HOH . ZA 7 HOH C 14 514 139 HOH HOH . ZA 7 HOH C 15 515 85 HOH HOH . ZA 7 HOH C 16 516 88 HOH HOH . ZA 7 HOH C 17 517 501 HOH HOH . AB 7 HOH D 1 501 120 HOH HOH . AB 7 HOH D 2 502 154 HOH HOH . AB 7 HOH D 3 503 32 HOH HOH . AB 7 HOH D 4 504 100 HOH HOH . AB 7 HOH D 5 505 11 HOH HOH . AB 7 HOH D 6 506 201 HOH HOH . AB 7 HOH D 7 507 91 HOH HOH . AB 7 HOH D 8 508 142 HOH HOH . AB 7 HOH D 9 509 526 HOH HOH . AB 7 HOH D 10 510 59 HOH HOH . AB 7 HOH D 11 511 17 HOH HOH . AB 7 HOH D 12 512 195 HOH HOH . AB 7 HOH D 13 513 559 HOH HOH . AB 7 HOH D 14 514 540 HOH HOH . AB 7 HOH D 15 515 192 HOH HOH . AB 7 HOH D 16 516 410 HOH HOH . AB 7 HOH D 17 517 93 HOH HOH . AB 7 HOH D 18 518 113 HOH HOH . AB 7 HOH D 19 519 58 HOH HOH . AB 7 HOH D 20 520 86 HOH HOH . AB 7 HOH D 21 521 37 HOH HOH . AB 7 HOH D 22 522 207 HOH HOH . AB 7 HOH D 23 523 98 HOH HOH . AB 7 HOH D 24 524 41 HOH HOH . AB 7 HOH D 25 525 51 HOH HOH . AB 7 HOH D 26 526 501 HOH HOH . AB 7 HOH D 27 527 3 HOH HOH . AB 7 HOH D 28 528 566 HOH HOH . AB 7 HOH D 29 529 40 HOH HOH . BB 7 HOH E 1 501 413 HOH HOH . BB 7 HOH E 2 502 155 HOH HOH . BB 7 HOH E 3 503 12 HOH HOH . BB 7 HOH E 4 504 134 HOH HOH . BB 7 HOH E 5 505 69 HOH HOH . BB 7 HOH E 6 506 1 HOH HOH . BB 7 HOH E 7 507 103 HOH HOH . BB 7 HOH E 8 508 18 HOH HOH . BB 7 HOH E 9 509 4 HOH HOH . BB 7 HOH E 10 510 193 HOH HOH . BB 7 HOH E 11 511 174 HOH HOH . BB 7 HOH E 12 512 29 HOH HOH . BB 7 HOH E 13 513 510 HOH HOH . BB 7 HOH E 14 514 144 HOH HOH . BB 7 HOH E 15 515 31 HOH HOH . BB 7 HOH E 16 516 560 HOH HOH . BB 7 HOH E 17 517 79 HOH HOH . BB 7 HOH E 18 518 62 HOH HOH . BB 7 HOH E 19 519 172 HOH HOH . BB 7 HOH E 20 520 577 HOH HOH . BB 7 HOH E 21 521 119 HOH HOH . BB 7 HOH E 22 522 206 HOH HOH . BB 7 HOH E 23 523 99 HOH HOH . BB 7 HOH E 24 524 42 HOH HOH . BB 7 HOH E 25 525 501 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . O 3 30.084 -9.767 5.075 1 36.8 ? C ACT 410 A 1 HETATM 2 O O ACT . . . O 3 29.665 -10.228 4.05 1 36.32 ? O ACT 410 A 1 HETATM 3 O OXT ACT . . . O 3 29.505 -8.897 5.767 1 36.97 ? OXT ACT 410 A 1 HETATM 4 C CH3 ACT . . . O 3 31.447 -10.301 5.477 1 39.09 ? CH3 ACT 410 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #