data_6HZP # _model_server_result.job_id s45WJKQNifETzbZKd6rq_Q _model_server_result.datetime_utc '2024-12-24 01:47:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6hzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6HZP # _exptl.entry_id 6HZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-azanyl-4-oxidanylidene-pentanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.98 _cell.angle_gamma 90 _cell.entry_id 6HZP _cell.length_a 60.03 _cell.length_b 57.06 _cell.length_c 99.5 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O3' _chem_comp.formula_weight 131.13 _chem_comp.id FVT _chem_comp.mon_nstd_flag . _chem_comp.name '5-azanyl-4-oxidanylidene-pentanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C4 FVT sing 83 n n O2 C3 FVT doub 84 n n C4 C3 FVT sing 85 n n C1 C2 FVT sing 86 n n C1 C FVT sing 87 n n C3 C FVT sing 88 n n O C2 FVT doub 89 n n C2 O1 FVT sing 90 n n C1 H1 FVT sing 91 n n C1 H2 FVT sing 92 n n C4 H3 FVT sing 93 n n C4 H4 FVT sing 94 n n N H5 FVT sing 95 n n N H6 FVT sing 96 n n C H8 FVT sing 97 n n C H9 FVT sing 98 n n O1 H10 FVT sing 99 n n # _atom_sites.entry_id 6HZP _atom_sites.fract_transf_matrix[1][1] 0.016658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004457 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017525 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FVT A 1 501 1 FVT 5AM . C 3 HOH A 1 601 79 HOH HOH . C 3 HOH A 2 602 76 HOH HOH . C 3 HOH A 3 603 77 HOH HOH . C 3 HOH A 4 604 35 HOH HOH . C 3 HOH A 5 605 71 HOH HOH . C 3 HOH A 6 606 80 HOH HOH . C 3 HOH A 7 607 30 HOH HOH . C 3 HOH A 8 608 92 HOH HOH . C 3 HOH A 9 609 84 HOH HOH . C 3 HOH A 10 610 62 HOH HOH . C 3 HOH A 11 611 90 HOH HOH . C 3 HOH A 12 612 60 HOH HOH . C 3 HOH A 13 613 85 HOH HOH . C 3 HOH A 14 614 78 HOH HOH . C 3 HOH A 15 615 68 HOH HOH . C 3 HOH A 16 616 88 HOH HOH . C 3 HOH A 17 617 21 HOH HOH . C 3 HOH A 18 618 91 HOH HOH . C 3 HOH A 19 619 81 HOH HOH . C 3 HOH A 20 620 69 HOH HOH . C 3 HOH A 21 621 31 HOH HOH . C 3 HOH A 22 622 82 HOH HOH . C 3 HOH A 23 623 83 HOH HOH . C 3 HOH A 24 624 86 HOH HOH . C 3 HOH A 25 625 46 HOH HOH . C 3 HOH A 26 626 89 HOH HOH . C 3 HOH A 27 627 37 HOH HOH . C 3 HOH A 28 628 73 HOH HOH . C 3 HOH A 29 629 74 HOH HOH . C 3 HOH A 30 630 87 HOH HOH . C 3 HOH A 31 631 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FVT . . . B 2 21.51 2.565 32.624 1 91.94 ? C1 FVT 501 A 1 HETATM 2 C C3 FVT . . . B 2 19.011 2.691 32.752 1 94.23 ? C3 FVT 501 A 1 HETATM 3 O O2 FVT . . . B 2 18.643 3.795 32.408 1 95.24 ? O2 FVT 501 A 1 HETATM 4 C C4 FVT . . . B 2 18.205 1.449 32.424 1 94.02 ? C4 FVT 501 A 1 HETATM 5 N N FVT . . . B 2 16.791 1.687 32.189 1 94.25 ? N FVT 501 A 1 HETATM 6 C C FVT . . . B 2 20.29 2.503 33.526 1 92.52 ? C FVT 501 A 1 HETATM 7 C C2 FVT . . . B 2 22.762 2.996 33.333 1 92.37 ? C2 FVT 501 A 1 HETATM 8 O O FVT . . . B 2 23.297 4.071 33.135 1 92.36 ? O FVT 501 A 1 HETATM 9 O O1 FVT . . . B 2 23.233 2.099 34.164 1 92.79 ? O1 FVT 501 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #