data_6I0K # _model_server_result.job_id QM9p0xyygFvZL8ma5KQ_5w _model_server_result.datetime_utc '2024-12-01 04:35:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6I0K # _exptl.entry_id 6I0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.66 _cell.angle_gamma 90 _cell.entry_id 6I0K _cell.length_a 55.7 _cell.length_b 48.38 _cell.length_c 60.64 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 88 A CYS 81 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc2 A SG CYS 175 A CYS 168 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc3 A SG CYS 261 A CYS 254 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc4 B FE3 SF4 . A SF4 301 1_555 C S GZ8 . A GZ8 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 313 n n FE1 S3 SF4 sing 314 n n FE1 S4 SF4 sing 315 n n FE2 S1 SF4 sing 316 n n FE2 S3 SF4 sing 317 n n FE2 S4 SF4 sing 318 n n FE3 S1 SF4 sing 319 n n FE3 S2 SF4 sing 320 n n FE3 S4 SF4 sing 321 n n FE4 S1 SF4 sing 322 n n FE4 S2 SF4 sing 323 n n FE4 S3 SF4 sing 324 n n # _atom_sites.entry_id 6I0K _atom_sites.fract_transf_matrix[1][1] 0.017953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005716 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017306 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 301 SF4 SF4 . C 3 GZ8 A 1 302 302 GZ8 QCS . D 4 PO4 A 1 303 303 PO4 PO4 . E 5 CL A 1 304 310 CL CL . F 6 HOH A 1 401 71 HOH HOH . F 6 HOH A 2 402 74 HOH HOH . F 6 HOH A 3 403 381 HOH HOH . F 6 HOH A 4 404 76 HOH HOH . F 6 HOH A 5 405 201 HOH HOH . F 6 HOH A 6 406 186 HOH HOH . F 6 HOH A 7 407 47 HOH HOH . F 6 HOH A 8 408 315 HOH HOH . F 6 HOH A 9 409 374 HOH HOH . F 6 HOH A 10 410 444 HOH HOH . F 6 HOH A 11 411 66 HOH HOH . F 6 HOH A 12 412 419 HOH HOH . F 6 HOH A 13 413 104 HOH HOH . F 6 HOH A 14 414 414 HOH HOH . F 6 HOH A 15 415 8 HOH HOH . F 6 HOH A 16 416 116 HOH HOH . F 6 HOH A 17 417 27 HOH HOH . F 6 HOH A 18 418 9 HOH HOH . F 6 HOH A 19 419 328 HOH HOH . F 6 HOH A 20 420 86 HOH HOH . F 6 HOH A 21 421 202 HOH HOH . F 6 HOH A 22 422 192 HOH HOH . F 6 HOH A 23 423 112 HOH HOH . F 6 HOH A 24 424 204 HOH HOH . F 6 HOH A 25 425 164 HOH HOH . F 6 HOH A 26 426 393 HOH HOH . F 6 HOH A 27 427 318 HOH HOH . F 6 HOH A 28 428 131 HOH HOH . F 6 HOH A 29 429 5 HOH HOH . F 6 HOH A 30 430 189 HOH HOH . F 6 HOH A 31 431 424 HOH HOH . F 6 HOH A 32 432 32 HOH HOH . F 6 HOH A 33 433 12 HOH HOH . F 6 HOH A 34 434 75 HOH HOH . F 6 HOH A 35 435 56 HOH HOH . F 6 HOH A 36 436 198 HOH HOH . F 6 HOH A 37 437 95 HOH HOH . F 6 HOH A 38 438 195 HOH HOH . F 6 HOH A 39 439 131 HOH HOH . F 6 HOH A 40 440 317 HOH HOH . F 6 HOH A 41 441 50 HOH HOH . F 6 HOH A 42 442 181 HOH HOH . F 6 HOH A 43 443 73 HOH HOH . F 6 HOH A 44 444 179 HOH HOH . F 6 HOH A 45 445 390 HOH HOH . F 6 HOH A 46 446 40 HOH HOH . F 6 HOH A 47 447 93 HOH HOH . F 6 HOH A 48 448 350 HOH HOH . F 6 HOH A 49 449 82 HOH HOH . F 6 HOH A 50 450 94 HOH HOH . F 6 HOH A 51 451 86 HOH HOH . F 6 HOH A 52 452 106 HOH HOH . F 6 HOH A 53 453 16 HOH HOH . F 6 HOH A 54 454 312 HOH HOH . F 6 HOH A 55 455 352 HOH HOH . F 6 HOH A 56 456 68 HOH HOH . F 6 HOH A 57 457 132 HOH HOH . F 6 HOH A 58 458 344 HOH HOH . F 6 HOH A 59 459 359 HOH HOH . F 6 HOH A 60 460 108 HOH HOH . F 6 HOH A 61 461 6 HOH HOH . F 6 HOH A 62 462 387 HOH HOH . F 6 HOH A 63 463 90 HOH HOH . F 6 HOH A 64 464 135 HOH HOH . F 6 HOH A 65 465 329 HOH HOH . F 6 HOH A 66 466 122 HOH HOH . F 6 HOH A 67 467 134 HOH HOH . F 6 HOH A 68 468 1 HOH HOH . F 6 HOH A 69 469 340 HOH HOH . F 6 HOH A 70 470 188 HOH HOH . F 6 HOH A 71 471 11 HOH HOH . F 6 HOH A 72 472 51 HOH HOH . F 6 HOH A 73 473 406 HOH HOH . F 6 HOH A 74 474 207 HOH HOH . F 6 HOH A 75 475 5 HOH HOH . F 6 HOH A 76 476 64 HOH HOH . F 6 HOH A 77 477 97 HOH HOH . F 6 HOH A 78 478 121 HOH HOH . F 6 HOH A 79 479 346 HOH HOH . F 6 HOH A 80 480 176 HOH HOH . F 6 HOH A 81 481 420 HOH HOH . F 6 HOH A 82 482 42 HOH HOH . F 6 HOH A 83 483 83 HOH HOH . F 6 HOH A 84 484 320 HOH HOH . F 6 HOH A 85 485 125 HOH HOH . F 6 HOH A 86 486 316 HOH HOH . F 6 HOH A 87 487 128 HOH HOH . F 6 HOH A 88 488 107 HOH HOH . F 6 HOH A 89 489 332 HOH HOH . F 6 HOH A 90 490 356 HOH HOH . F 6 HOH A 91 491 335 HOH HOH . F 6 HOH A 92 492 75 HOH HOH . F 6 HOH A 93 493 324 HOH HOH . F 6 HOH A 94 494 187 HOH HOH . F 6 HOH A 95 495 44 HOH HOH . F 6 HOH A 96 496 313 HOH HOH . F 6 HOH A 97 497 87 HOH HOH . F 6 HOH A 98 498 400 HOH HOH . F 6 HOH A 99 499 322 HOH HOH . F 6 HOH A 100 500 168 HOH HOH . F 6 HOH A 101 501 13 HOH HOH . F 6 HOH A 102 502 422 HOH HOH . F 6 HOH A 103 503 102 HOH HOH . F 6 HOH A 104 504 349 HOH HOH . F 6 HOH A 105 505 327 HOH HOH . F 6 HOH A 106 506 4 HOH HOH . F 6 HOH A 107 507 418 HOH HOH . F 6 HOH A 108 508 417 HOH HOH . F 6 HOH A 109 509 138 HOH HOH . F 6 HOH A 110 510 395 HOH HOH . F 6 HOH A 111 511 345 HOH HOH . F 6 HOH A 112 512 85 HOH HOH . F 6 HOH A 113 513 60 HOH HOH . F 6 HOH A 114 514 311 HOH HOH . F 6 HOH A 115 515 185 HOH HOH . F 6 HOH A 116 516 58 HOH HOH . F 6 HOH A 117 517 368 HOH HOH . F 6 HOH A 118 518 100 HOH HOH . F 6 HOH A 119 519 128 HOH HOH . F 6 HOH A 120 520 2 HOH HOH . F 6 HOH A 121 521 113 HOH HOH . F 6 HOH A 122 522 193 HOH HOH . F 6 HOH A 123 523 52 HOH HOH . F 6 HOH A 124 524 16 HOH HOH . F 6 HOH A 125 525 118 HOH HOH . F 6 HOH A 126 526 39 HOH HOH . F 6 HOH A 127 527 396 HOH HOH . F 6 HOH A 128 528 355 HOH HOH . F 6 HOH A 129 529 210 HOH HOH . F 6 HOH A 130 530 30 HOH HOH . F 6 HOH A 131 531 24 HOH HOH . F 6 HOH A 132 532 63 HOH HOH . F 6 HOH A 133 533 430 HOH HOH . F 6 HOH A 134 534 15 HOH HOH . F 6 HOH A 135 535 49 HOH HOH . F 6 HOH A 136 536 341 HOH HOH . F 6 HOH A 137 537 26 HOH HOH . F 6 HOH A 138 538 60 HOH HOH . F 6 HOH A 139 539 169 HOH HOH . F 6 HOH A 140 540 409 HOH HOH . F 6 HOH A 141 541 118 HOH HOH . F 6 HOH A 142 542 1 HOH HOH . F 6 HOH A 143 543 42 HOH HOH . F 6 HOH A 144 544 208 HOH HOH . F 6 HOH A 145 545 385 HOH HOH . F 6 HOH A 146 546 361 HOH HOH . F 6 HOH A 147 547 376 HOH HOH . F 6 HOH A 148 548 13 HOH HOH . F 6 HOH A 149 549 379 HOH HOH . F 6 HOH A 150 550 415 HOH HOH . F 6 HOH A 151 551 83 HOH HOH . F 6 HOH A 152 552 99 HOH HOH . F 6 HOH A 153 553 43 HOH HOH . F 6 HOH A 154 554 370 HOH HOH . F 6 HOH A 155 555 331 HOH HOH . F 6 HOH A 156 556 408 HOH HOH . F 6 HOH A 157 557 101 HOH HOH . F 6 HOH A 158 558 343 HOH HOH . F 6 HOH A 159 559 34 HOH HOH . F 6 HOH A 160 560 351 HOH HOH . F 6 HOH A 161 561 78 HOH HOH . F 6 HOH A 162 562 18 HOH HOH . F 6 HOH A 163 563 413 HOH HOH . F 6 HOH A 164 564 321 HOH HOH . F 6 HOH A 165 565 362 HOH HOH . F 6 HOH A 166 566 354 HOH HOH . F 6 HOH A 167 567 365 HOH HOH . F 6 HOH A 168 568 209 HOH HOH . F 6 HOH A 169 569 80 HOH HOH . F 6 HOH A 170 570 23 HOH HOH . F 6 HOH A 171 571 197 HOH HOH . F 6 HOH A 172 572 19 HOH HOH . F 6 HOH A 173 573 45 HOH HOH . F 6 HOH A 174 574 73 HOH HOH . F 6 HOH A 175 575 123 HOH HOH . F 6 HOH A 176 576 56 HOH HOH . F 6 HOH A 177 577 49 HOH HOH . F 6 HOH A 178 578 35 HOH HOH . F 6 HOH A 179 579 41 HOH HOH . F 6 HOH A 180 580 124 HOH HOH . F 6 HOH A 181 581 314 HOH HOH . F 6 HOH A 182 582 127 HOH HOH . F 6 HOH A 183 583 432 HOH HOH . F 6 HOH A 184 584 436 HOH HOH . F 6 HOH A 185 585 91 HOH HOH . F 6 HOH A 186 586 425 HOH HOH . F 6 HOH A 187 587 134 HOH HOH . F 6 HOH A 188 588 367 HOH HOH . F 6 HOH A 189 589 333 HOH HOH . F 6 HOH A 190 590 167 HOH HOH . F 6 HOH A 191 591 205 HOH HOH . F 6 HOH A 192 592 137 HOH HOH . F 6 HOH A 193 593 194 HOH HOH . F 6 HOH A 194 594 129 HOH HOH . F 6 HOH A 195 595 139 HOH HOH . F 6 HOH A 196 596 6 HOH HOH . F 6 HOH A 197 597 120 HOH HOH . F 6 HOH A 198 598 140 HOH HOH . F 6 HOH A 199 599 79 HOH HOH . F 6 HOH A 200 600 366 HOH HOH . F 6 HOH A 201 601 24 HOH HOH . F 6 HOH A 202 602 142 HOH HOH . F 6 HOH A 203 603 392 HOH HOH . F 6 HOH A 204 604 65 HOH HOH . F 6 HOH A 205 605 84 HOH HOH . F 6 HOH A 206 606 133 HOH HOH . F 6 HOH A 207 607 138 HOH HOH . F 6 HOH A 208 608 88 HOH HOH . F 6 HOH A 209 609 389 HOH HOH . F 6 HOH A 210 610 203 HOH HOH . F 6 HOH A 211 611 119 HOH HOH . F 6 HOH A 212 612 175 HOH HOH . F 6 HOH A 213 613 394 HOH HOH . F 6 HOH A 214 614 143 HOH HOH . F 6 HOH A 215 615 184 HOH HOH . F 6 HOH A 216 616 434 HOH HOH . F 6 HOH A 217 617 94 HOH HOH . F 6 HOH A 218 618 97 HOH HOH . F 6 HOH A 219 619 130 HOH HOH . F 6 HOH A 220 620 72 HOH HOH . F 6 HOH A 221 621 98 HOH HOH . F 6 HOH A 222 622 70 HOH HOH . F 6 HOH A 223 623 57 HOH HOH . F 6 HOH A 224 624 439 HOH HOH . F 6 HOH A 225 625 174 HOH HOH . F 6 HOH A 226 626 31 HOH HOH . F 6 HOH A 227 627 109 HOH HOH . F 6 HOH A 228 628 141 HOH HOH . F 6 HOH A 229 629 105 HOH HOH . F 6 HOH A 230 630 200 HOH HOH . F 6 HOH A 231 631 38 HOH HOH . F 6 HOH A 232 632 34 HOH HOH . F 6 HOH A 233 633 126 HOH HOH . F 6 HOH A 234 634 426 HOH HOH . F 6 HOH A 235 635 110 HOH HOH . F 6 HOH A 236 636 65 HOH HOH . F 6 HOH A 237 637 398 HOH HOH . F 6 HOH A 238 638 172 HOH HOH . F 6 HOH A 239 639 77 HOH HOH . F 6 HOH A 240 640 14 HOH HOH . F 6 HOH A 241 641 61 HOH HOH . F 6 HOH A 242 642 62 HOH HOH . F 6 HOH A 243 643 57 HOH HOH . F 6 HOH A 244 644 147 HOH HOH . F 6 HOH A 245 645 383 HOH HOH . F 6 HOH A 246 646 440 HOH HOH . F 6 HOH A 247 647 25 HOH HOH . F 6 HOH A 248 648 199 HOH HOH . F 6 HOH A 249 649 190 HOH HOH . F 6 HOH A 250 650 191 HOH HOH . F 6 HOH A 251 651 353 HOH HOH . F 6 HOH A 252 652 89 HOH HOH . F 6 HOH A 253 653 124 HOH HOH . F 6 HOH A 254 654 96 HOH HOH . F 6 HOH A 255 655 369 HOH HOH . F 6 HOH A 256 656 22 HOH HOH . F 6 HOH A 257 657 115 HOH HOH . F 6 HOH A 258 658 92 HOH HOH . F 6 HOH A 259 659 429 HOH HOH . F 6 HOH A 260 660 391 HOH HOH . F 6 HOH A 261 661 196 HOH HOH . F 6 HOH A 262 662 206 HOH HOH . F 6 HOH A 263 663 183 HOH HOH . F 6 HOH A 264 664 67 HOH HOH . F 6 HOH A 265 665 437 HOH HOH . F 6 HOH A 266 666 178 HOH HOH . F 6 HOH A 267 667 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 15.496 -4.902 10.428 1 28.75 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . B 2 14.014 -6.5 12.2 1 28.48 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . B 2 13.76 -3.743 12.177 1 26.99 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . B 2 15.999 -4.83 13.159 1 27.83 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . B 2 13.948 -5.14 14.124 1 26.74 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . B 2 15.829 -2.957 11.716 1 27.6 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . B 2 16.304 -6.736 11.763 1 29.7 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . B 2 13.246 -5.155 10.381 1 29 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #