data_6I0R # _model_server_result.job_id DzoPMAuSCUskMIHRm9Yb3w _model_server_result.datetime_utc '2024-12-01 04:33:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 6I0R # _exptl.entry_id 6I0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.184 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-mercaptopyridine-2,3-dicarboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.1 _cell.angle_gamma 90 _cell.entry_id 6I0R _cell.length_a 54.9 _cell.length_b 48.5 _cell.length_c 60.5 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 88 A CYS 81 1_555 F FE FE . A FE 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 A SG CYS 175 A CYS 168 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc3 A OE1 GLU 202 A GLU 195 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc4 A SG CYS 261 A CYS 254 1_555 G FE FE . A FE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 B FE FE . A FE 301 1_555 D S H2S . A H2S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc6 B FE FE . A FE 301 1_555 E S H2S . A H2S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc7 C FE FE . A FE 302 1_555 D S H2S . A H2S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc8 C FE FE . A FE 302 1_555 E S H2S . A H2S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc9 C FE FE . A FE 302 1_555 H S H2S . A H2S 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc10 C FE FE . A FE 302 1_555 J S QAT . A QAT 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc11 F FE FE . A FE 305 1_555 H S H2S . A H2S 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc12 G FE FE . A FE 306 1_555 H S H2S . A H2S 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc13 G FE FE . A FE 306 1_555 I S H2S . A H2S 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? # _chem_comp.formula 'C7 H5 N O4 S' _chem_comp.formula_weight 199.184 _chem_comp.id QAT _chem_comp.mon_nstd_flag . _chem_comp.name '5-mercaptopyridine-2,3-dicarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C7 QAT doub 279 n n C7 O2 QAT sing 280 n n C7 C2 QAT sing 281 n n N1 C6 QAT doub 282 n n N1 C2 QAT sing 283 n n C6 C5 QAT sing 284 n n C2 C3 QAT doub 285 n n C5 S QAT doub 286 n n C5 C4 QAT sing 287 n n C3 C4 QAT sing 288 n n C3 C8 QAT sing 289 n n O3 C8 QAT doub 290 n n C8 O4 QAT sing 291 n n O2 H1 QAT sing 292 n n C6 H2 QAT sing 293 n n C4 H3 QAT sing 294 n n C4 H4 QAT sing 295 n n O4 H5 QAT sing 296 n n # _atom_sites.entry_id 6I0R _atom_sites.fract_transf_matrix[1][1] 0.018215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005604 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 301 301 FE FE . C 2 FE A 1 302 302 FE FE . D 3 H2S A 1 303 303 H2S S . E 3 H2S A 1 304 304 H2S S . F 2 FE A 1 305 305 FE FE . G 2 FE A 1 306 306 FE FE . H 3 H2S A 1 307 307 H2S S . I 3 H2S A 1 308 308 H2S S . J 4 QAT A 1 309 311 QAT QAT . K 5 HOH A 1 401 37 HOH HOH . K 5 HOH A 2 402 82 HOH HOH . K 5 HOH A 3 403 83 HOH HOH . K 5 HOH A 4 404 105 HOH HOH . K 5 HOH A 5 405 89 HOH HOH . K 5 HOH A 6 406 70 HOH HOH . K 5 HOH A 7 407 49 HOH HOH . K 5 HOH A 8 408 75 HOH HOH . K 5 HOH A 9 409 24 HOH HOH . K 5 HOH A 10 410 8 HOH HOH . K 5 HOH A 11 411 44 HOH HOH . K 5 HOH A 12 412 13 HOH HOH . K 5 HOH A 13 413 42 HOH HOH . K 5 HOH A 14 414 2 HOH HOH . K 5 HOH A 15 415 40 HOH HOH . K 5 HOH A 16 416 98 HOH HOH . K 5 HOH A 17 417 56 HOH HOH . K 5 HOH A 18 418 100 HOH HOH . K 5 HOH A 19 419 61 HOH HOH . K 5 HOH A 20 420 48 HOH HOH . K 5 HOH A 21 421 19 HOH HOH . K 5 HOH A 22 422 63 HOH HOH . K 5 HOH A 23 423 64 HOH HOH . K 5 HOH A 24 424 86 HOH HOH . K 5 HOH A 25 425 32 HOH HOH . K 5 HOH A 26 426 39 HOH HOH . K 5 HOH A 27 427 67 HOH HOH . K 5 HOH A 28 428 27 HOH HOH . K 5 HOH A 29 429 65 HOH HOH . K 5 HOH A 30 430 101 HOH HOH . K 5 HOH A 31 431 3 HOH HOH . K 5 HOH A 32 432 38 HOH HOH . K 5 HOH A 33 433 45 HOH HOH . K 5 HOH A 34 434 113 HOH HOH . K 5 HOH A 35 435 29 HOH HOH . K 5 HOH A 36 436 21 HOH HOH . K 5 HOH A 37 437 52 HOH HOH . K 5 HOH A 38 438 5 HOH HOH . K 5 HOH A 39 439 17 HOH HOH . K 5 HOH A 40 440 85 HOH HOH . K 5 HOH A 41 441 71 HOH HOH . K 5 HOH A 42 442 58 HOH HOH . K 5 HOH A 43 443 109 HOH HOH . K 5 HOH A 44 444 46 HOH HOH . K 5 HOH A 45 445 14 HOH HOH . K 5 HOH A 46 446 16 HOH HOH . K 5 HOH A 47 447 81 HOH HOH . K 5 HOH A 48 448 108 HOH HOH . K 5 HOH A 49 449 76 HOH HOH . K 5 HOH A 50 450 66 HOH HOH . K 5 HOH A 51 451 12 HOH HOH . K 5 HOH A 52 452 106 HOH HOH . K 5 HOH A 53 453 4 HOH HOH . K 5 HOH A 54 454 102 HOH HOH . K 5 HOH A 55 455 30 HOH HOH . K 5 HOH A 56 456 91 HOH HOH . K 5 HOH A 57 457 22 HOH HOH . K 5 HOH A 58 458 25 HOH HOH . K 5 HOH A 59 459 15 HOH HOH . K 5 HOH A 60 460 69 HOH HOH . K 5 HOH A 61 461 9 HOH HOH . K 5 HOH A 62 462 60 HOH HOH . K 5 HOH A 63 463 28 HOH HOH . K 5 HOH A 64 464 7 HOH HOH . K 5 HOH A 65 465 88 HOH HOH . K 5 HOH A 66 466 1 HOH HOH . K 5 HOH A 67 467 54 HOH HOH . K 5 HOH A 68 468 53 HOH HOH . K 5 HOH A 69 469 59 HOH HOH . K 5 HOH A 70 470 94 HOH HOH . K 5 HOH A 71 471 90 HOH HOH . K 5 HOH A 72 472 41 HOH HOH . K 5 HOH A 73 473 11 HOH HOH . K 5 HOH A 74 474 18 HOH HOH . K 5 HOH A 75 475 35 HOH HOH . K 5 HOH A 76 476 80 HOH HOH . K 5 HOH A 77 477 107 HOH HOH . K 5 HOH A 78 478 87 HOH HOH . K 5 HOH A 79 479 77 HOH HOH . K 5 HOH A 80 480 43 HOH HOH . K 5 HOH A 81 481 23 HOH HOH . K 5 HOH A 82 482 96 HOH HOH . K 5 HOH A 83 483 72 HOH HOH . K 5 HOH A 84 484 110 HOH HOH . K 5 HOH A 85 485 51 HOH HOH . K 5 HOH A 86 486 93 HOH HOH . K 5 HOH A 87 487 20 HOH HOH . K 5 HOH A 88 488 84 HOH HOH . K 5 HOH A 89 489 36 HOH HOH . K 5 HOH A 90 490 111 HOH HOH . K 5 HOH A 91 491 112 HOH HOH . K 5 HOH A 92 492 55 HOH HOH . K 5 HOH A 93 493 97 HOH HOH . K 5 HOH A 94 494 10 HOH HOH . K 5 HOH A 95 495 31 HOH HOH . K 5 HOH A 96 496 50 HOH HOH . K 5 HOH A 97 497 6 HOH HOH . K 5 HOH A 98 498 92 HOH HOH . K 5 HOH A 99 499 99 HOH HOH . K 5 HOH A 100 500 73 HOH HOH . K 5 HOH A 101 502 47 HOH HOH . K 5 HOH A 102 503 62 HOH HOH . K 5 HOH A 103 504 79 HOH HOH . K 5 HOH A 104 505 26 HOH HOH . K 5 HOH A 105 506 57 HOH HOH . K 5 HOH A 106 507 78 HOH HOH . K 5 HOH A 107 508 74 HOH HOH . K 5 HOH A 108 509 103 HOH HOH . K 5 HOH A 109 510 104 HOH HOH . K 5 HOH A 110 511 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 QAT . . . J 4 10.402 2.137 9.216 1 38.47 ? O1 QAT 309 A 1 HETATM 2 C C7 QAT . . . J 4 10.218 1.978 10.436 1 36.92 ? C7 QAT 309 A 1 HETATM 3 O O2 QAT . . . J 4 9.256 2.486 11.028 1 37.56 ? O2 QAT 309 A 1 HETATM 4 C C2 QAT . . . J 4 11.191 1.128 11.179 1 36.85 ? C2 QAT 309 A 1 HETATM 5 N N1 QAT . . . J 4 11.953 0.289 10.469 1 37.09 ? N1 QAT 309 A 1 HETATM 6 C C6 QAT . . . J 4 12.839 -0.509 11.058 1 39.84 ? C6 QAT 309 A 1 HETATM 7 C C5 QAT . . . J 4 13.015 -0.491 12.436 1 41.42 ? C5 QAT 309 A 1 HETATM 8 S S QAT . . . J 4 14.191 -1.517 13.145 0.8 43.84 ? S QAT 309 A 1 HETATM 9 C C4 QAT . . . J 4 12.259 0.357 13.242 1 39.6 ? C4 QAT 309 A 1 HETATM 10 C C3 QAT . . . J 4 11.336 1.184 12.648 1 36.19 ? C3 QAT 309 A 1 HETATM 11 C C8 QAT . . . J 4 10.528 2.105 13.476 1 34.69 ? C8 QAT 309 A 1 HETATM 12 O O4 QAT . . . J 4 9.642 1.689 14.241 1 33.53 ? O4 QAT 309 A 1 HETATM 13 O O3 QAT . . . J 4 10.794 3.307 13.373 1 36.26 ? O3 QAT 309 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 13 #