data_6I0V # _model_server_result.job_id vdyptWJuBWE7_vfMnfcELA _model_server_result.datetime_utc '2025-07-07 22:32:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6I0V # _exptl.entry_id 6I0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6I0V _cell.length_a 60.077 _cell.length_b 60.077 _cell.length_c 162.293 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 102 A ASP 278 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc2 A OD2 ASP 102 A ASP 278 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A OD1 ASP 104 A ASP 280 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc4 A OD2 ASP 104 A ASP 280 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 A OD2 ASP 167 A ASP 343 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc6 C MG MG . A MG 601 1_555 B O3' G 5 B G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc7 C MG MG . A MG 601 1_555 B OP1 U 6 B U 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc8 D MG MG . A MG 602 1_555 E O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc9 D MG MG . A MG 602 1_555 B OP1 U 6 B U 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc10 D MG MG . A MG 602 1_555 F O HOH . B HOH 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc11 D MG MG . A MG 602 1_555 F O HOH . B HOH 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6I0V _atom_sites.fract_transf_matrix[1][1] 0.016645 _atom_sites.fract_transf_matrix[1][2] 0.00961 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006162 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 601 1 MG MG . D 3 MG A 1 602 2 MG MG . E 4 HOH A 1 701 112 HOH HOH . E 4 HOH A 2 702 27 HOH HOH . E 4 HOH A 3 703 13 HOH HOH . E 4 HOH A 4 704 23 HOH HOH . E 4 HOH A 5 705 35 HOH HOH . E 4 HOH A 6 706 62 HOH HOH . E 4 HOH A 7 707 1 HOH HOH . E 4 HOH A 8 708 81 HOH HOH . E 4 HOH A 9 709 93 HOH HOH . E 4 HOH A 10 710 26 HOH HOH . E 4 HOH A 11 711 41 HOH HOH . E 4 HOH A 12 712 18 HOH HOH . E 4 HOH A 13 713 59 HOH HOH . E 4 HOH A 14 714 82 HOH HOH . E 4 HOH A 15 715 96 HOH HOH . E 4 HOH A 16 716 32 HOH HOH . E 4 HOH A 17 717 25 HOH HOH . E 4 HOH A 18 718 78 HOH HOH . E 4 HOH A 19 719 39 HOH HOH . E 4 HOH A 20 720 8 HOH HOH . E 4 HOH A 21 721 68 HOH HOH . E 4 HOH A 22 722 44 HOH HOH . E 4 HOH A 23 723 19 HOH HOH . E 4 HOH A 24 724 110 HOH HOH . E 4 HOH A 25 725 11 HOH HOH . E 4 HOH A 26 726 6 HOH HOH . E 4 HOH A 27 727 54 HOH HOH . E 4 HOH A 28 728 17 HOH HOH . E 4 HOH A 29 729 91 HOH HOH . E 4 HOH A 30 730 114 HOH HOH . E 4 HOH A 31 731 52 HOH HOH . E 4 HOH A 32 732 9 HOH HOH . E 4 HOH A 33 733 109 HOH HOH . E 4 HOH A 34 734 36 HOH HOH . E 4 HOH A 35 735 29 HOH HOH . E 4 HOH A 36 736 100 HOH HOH . E 4 HOH A 37 737 83 HOH HOH . E 4 HOH A 38 738 47 HOH HOH . E 4 HOH A 39 739 50 HOH HOH . E 4 HOH A 40 740 7 HOH HOH . E 4 HOH A 41 741 92 HOH HOH . E 4 HOH A 42 742 70 HOH HOH . E 4 HOH A 43 743 15 HOH HOH . E 4 HOH A 44 744 12 HOH HOH . E 4 HOH A 45 745 84 HOH HOH . E 4 HOH A 46 746 51 HOH HOH . E 4 HOH A 47 747 5 HOH HOH . E 4 HOH A 48 748 24 HOH HOH . E 4 HOH A 49 749 95 HOH HOH . E 4 HOH A 50 750 94 HOH HOH . E 4 HOH A 51 751 79 HOH HOH . E 4 HOH A 52 752 76 HOH HOH . E 4 HOH A 53 753 101 HOH HOH . E 4 HOH A 54 754 34 HOH HOH . E 4 HOH A 55 755 37 HOH HOH . E 4 HOH A 56 756 20 HOH HOH . E 4 HOH A 57 757 57 HOH HOH . E 4 HOH A 58 758 16 HOH HOH . E 4 HOH A 59 759 38 HOH HOH . E 4 HOH A 60 760 14 HOH HOH . E 4 HOH A 61 761 45 HOH HOH . E 4 HOH A 62 762 58 HOH HOH . E 4 HOH A 63 763 33 HOH HOH . E 4 HOH A 64 764 60 HOH HOH . E 4 HOH A 65 765 22 HOH HOH . E 4 HOH A 66 766 85 HOH HOH . E 4 HOH A 67 767 21 HOH HOH . E 4 HOH A 68 768 98 HOH HOH . E 4 HOH A 69 769 104 HOH HOH . E 4 HOH A 70 770 53 HOH HOH . E 4 HOH A 71 771 108 HOH HOH . E 4 HOH A 72 772 117 HOH HOH . E 4 HOH A 73 773 28 HOH HOH . E 4 HOH A 74 774 122 HOH HOH . E 4 HOH A 75 775 4 HOH HOH . E 4 HOH A 76 776 97 HOH HOH . E 4 HOH A 77 777 67 HOH HOH . E 4 HOH A 78 778 116 HOH HOH . E 4 HOH A 79 779 107 HOH HOH . E 4 HOH A 80 780 118 HOH HOH . E 4 HOH A 81 781 61 HOH HOH . E 4 HOH A 82 782 10 HOH HOH . E 4 HOH A 83 783 66 HOH HOH . E 4 HOH A 84 784 120 HOH HOH . E 4 HOH A 85 785 90 HOH HOH . E 4 HOH A 86 786 42 HOH HOH . E 4 HOH A 87 787 46 HOH HOH . E 4 HOH A 88 788 71 HOH HOH . E 4 HOH A 89 789 77 HOH HOH . E 4 HOH A 90 790 40 HOH HOH . E 4 HOH A 91 791 124 HOH HOH . E 4 HOH A 92 792 69 HOH HOH . E 4 HOH A 93 793 80 HOH HOH . E 4 HOH A 94 794 30 HOH HOH . E 4 HOH A 95 795 48 HOH HOH . E 4 HOH A 96 796 56 HOH HOH . E 4 HOH A 97 797 63 HOH HOH . E 4 HOH A 98 798 64 HOH HOH . E 4 HOH A 99 799 87 HOH HOH . E 4 HOH A 100 800 89 HOH HOH . E 4 HOH A 101 801 105 HOH HOH . E 4 HOH A 102 802 113 HOH HOH . E 4 HOH A 103 803 31 HOH HOH . E 4 HOH A 104 804 115 HOH HOH . E 4 HOH A 105 805 129 HOH HOH . E 4 HOH A 106 806 111 HOH HOH . E 4 HOH A 107 807 125 HOH HOH . E 4 HOH A 108 808 123 HOH HOH . E 4 HOH A 109 809 126 HOH HOH . E 4 HOH A 110 810 65 HOH HOH . E 4 HOH A 111 811 130 HOH HOH . E 4 HOH A 112 812 72 HOH HOH . E 4 HOH A 113 813 119 HOH HOH . E 4 HOH A 114 814 73 HOH HOH . E 4 HOH A 115 815 55 HOH HOH . E 4 HOH A 116 816 127 HOH HOH . E 4 HOH A 117 817 88 HOH HOH . E 4 HOH A 118 818 128 HOH HOH . E 4 HOH A 119 819 102 HOH HOH . E 4 HOH A 120 820 121 HOH HOH . E 4 HOH A 121 821 103 HOH HOH . E 4 HOH A 122 822 49 HOH HOH . E 4 HOH A 123 823 99 HOH HOH . E 4 HOH A 124 824 86 HOH HOH . E 4 HOH A 125 825 74 HOH HOH . E 4 HOH A 126 826 75 HOH HOH . F 4 HOH B 1 101 43 HOH HOH . F 4 HOH B 2 102 106 HOH HOH . F 4 HOH B 3 103 2 HOH HOH . F 4 HOH B 4 104 3 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -44.4 _atom_site.Cartn_y 12.81 _atom_site.Cartn_z -16.868 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #