data_6I10 # _model_server_result.job_id urz3g_YZvbqbXKOvv1rJ5w _model_server_result.datetime_utc '2024-11-23 02:43:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i10 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 6I10 # _exptl.entry_id 6I10 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6I10 _cell.length_a 61.667 _cell.length_b 91.839 _cell.length_c 97.062 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 6I10 _atom_sites.fract_transf_matrix[1][1] 0.016216 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GZK A 1 501 3 GZK DRG . C 3 ACT A 1 502 1 ACT ACT . D 4 EDO A 1 503 2 EDO EDO . E 4 EDO A 1 504 3 EDO EDO . F 4 EDO A 1 505 4 EDO EDO . G 5 HOH A 1 601 67 HOH HOH . G 5 HOH A 2 602 115 HOH HOH . G 5 HOH A 3 603 226 HOH HOH . G 5 HOH A 4 604 30 HOH HOH . G 5 HOH A 5 605 91 HOH HOH . G 5 HOH A 6 606 6 HOH HOH . G 5 HOH A 7 607 222 HOH HOH . G 5 HOH A 8 608 149 HOH HOH . G 5 HOH A 9 609 78 HOH HOH . G 5 HOH A 10 610 245 HOH HOH . G 5 HOH A 11 611 99 HOH HOH . G 5 HOH A 12 612 62 HOH HOH . G 5 HOH A 13 613 225 HOH HOH . G 5 HOH A 14 614 1 HOH HOH . G 5 HOH A 15 615 48 HOH HOH . G 5 HOH A 16 616 81 HOH HOH . G 5 HOH A 17 617 55 HOH HOH . G 5 HOH A 18 618 11 HOH HOH . G 5 HOH A 19 619 50 HOH HOH . G 5 HOH A 20 620 60 HOH HOH . G 5 HOH A 21 621 217 HOH HOH . G 5 HOH A 22 622 23 HOH HOH . G 5 HOH A 23 623 18 HOH HOH . G 5 HOH A 24 624 63 HOH HOH . G 5 HOH A 25 625 13 HOH HOH . G 5 HOH A 26 626 15 HOH HOH . G 5 HOH A 27 627 66 HOH HOH . G 5 HOH A 28 628 12 HOH HOH . G 5 HOH A 29 629 234 HOH HOH . G 5 HOH A 30 630 178 HOH HOH . G 5 HOH A 31 631 127 HOH HOH . G 5 HOH A 32 632 24 HOH HOH . G 5 HOH A 33 633 233 HOH HOH . G 5 HOH A 34 634 243 HOH HOH . G 5 HOH A 35 635 77 HOH HOH . G 5 HOH A 36 636 25 HOH HOH . G 5 HOH A 37 637 121 HOH HOH . G 5 HOH A 38 638 43 HOH HOH . G 5 HOH A 39 639 227 HOH HOH . G 5 HOH A 40 640 239 HOH HOH . G 5 HOH A 41 641 76 HOH HOH . G 5 HOH A 42 642 7 HOH HOH . G 5 HOH A 43 643 54 HOH HOH . G 5 HOH A 44 644 155 HOH HOH . G 5 HOH A 45 645 238 HOH HOH . G 5 HOH A 46 646 65 HOH HOH . G 5 HOH A 47 647 4 HOH HOH . G 5 HOH A 48 648 146 HOH HOH . G 5 HOH A 49 649 224 HOH HOH . G 5 HOH A 50 650 2 HOH HOH . G 5 HOH A 51 651 17 HOH HOH . G 5 HOH A 52 652 22 HOH HOH . G 5 HOH A 53 653 184 HOH HOH . G 5 HOH A 54 654 101 HOH HOH . G 5 HOH A 55 655 85 HOH HOH . G 5 HOH A 56 656 240 HOH HOH . G 5 HOH A 57 657 8 HOH HOH . G 5 HOH A 58 658 27 HOH HOH . G 5 HOH A 59 659 3 HOH HOH . G 5 HOH A 60 660 69 HOH HOH . G 5 HOH A 61 661 80 HOH HOH . G 5 HOH A 62 662 10 HOH HOH . G 5 HOH A 63 663 98 HOH HOH . G 5 HOH A 64 664 16 HOH HOH . G 5 HOH A 65 665 246 HOH HOH . G 5 HOH A 66 666 19 HOH HOH . G 5 HOH A 67 667 137 HOH HOH . G 5 HOH A 68 668 38 HOH HOH . G 5 HOH A 69 669 90 HOH HOH . G 5 HOH A 70 670 21 HOH HOH . G 5 HOH A 71 671 122 HOH HOH . G 5 HOH A 72 672 61 HOH HOH . G 5 HOH A 73 673 14 HOH HOH . G 5 HOH A 74 674 52 HOH HOH . G 5 HOH A 75 675 26 HOH HOH . G 5 HOH A 76 676 235 HOH HOH . G 5 HOH A 77 677 5 HOH HOH . G 5 HOH A 78 678 145 HOH HOH . G 5 HOH A 79 679 118 HOH HOH . G 5 HOH A 80 680 244 HOH HOH . G 5 HOH A 81 681 111 HOH HOH . G 5 HOH A 82 682 237 HOH HOH . G 5 HOH A 83 683 57 HOH HOH . G 5 HOH A 84 684 68 HOH HOH . G 5 HOH A 85 685 100 HOH HOH . G 5 HOH A 86 686 40 HOH HOH . G 5 HOH A 87 687 44 HOH HOH . G 5 HOH A 88 688 28 HOH HOH . G 5 HOH A 89 689 179 HOH HOH . G 5 HOH A 90 690 56 HOH HOH . G 5 HOH A 91 691 176 HOH HOH . G 5 HOH A 92 692 49 HOH HOH . G 5 HOH A 93 693 223 HOH HOH . G 5 HOH A 94 694 124 HOH HOH . G 5 HOH A 95 695 126 HOH HOH . G 5 HOH A 96 696 241 HOH HOH . G 5 HOH A 97 697 236 HOH HOH . G 5 HOH A 98 698 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 -30.18 22.562 -36.06 1 47.96 ? C1 EDO 504 A 1 HETATM 2 O O1 EDO . . . E 4 -31.043 21.452 -36.076 1 48.81 ? O1 EDO 504 A 1 HETATM 3 C C2 EDO . . . E 4 -30.133 23.146 -34.702 1 48.16 ? C2 EDO 504 A 1 HETATM 4 O O2 EDO . . . E 4 -29.118 24.084 -34.889 1 48.52 ? O2 EDO 504 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #