data_6I1F
#
_model_server_result.job_id            ETcT75NUDvKyu_uqh7YGqQ 
_model_server_result.datetime_utc      '2024-11-24 14:47:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6i1f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    6I1F 
#
_exptl.entry_id    6I1F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              367.42 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6I1F 
_cell.length_a            106.226 
_cell.length_b            106.226 
_cell.length_c            118.554 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6I1F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C16 H21 N3 O5 S' 
_chem_comp.formula_weight    367.42 
_chem_comp.id                AXL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'AMOXICILLIN, bound form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 AXL doub 70 n n 
C1 C2 AXL sing 71 n n 
C1 HC1 AXL sing 72 n n 
C2 C3 AXL sing 73 n n 
C2 N8 AXL sing 74 n n 
C2 HC2 AXL sing 75 n n 
C3 S4 AXL sing 76 n n 
C3 N7 AXL sing 77 n n 
C3 HC3 AXL sing 78 n n 
S4 C5 AXL sing 79 n n 
C5 C51 AXL sing 80 n n 
C5 C52 AXL sing 81 n n 
C5 C6 AXL sing 82 n n 
C51 H511 AXL sing 83 n n 
C51 H512 AXL sing 84 n n 
C51 H513 AXL sing 85 n n 
C52 H521 AXL sing 86 n n 
C52 H522 AXL sing 87 n n 
C52 H523 AXL sing 88 n n 
C6 C61 AXL sing 89 n n 
C6 N7 AXL sing 90 n n 
C6 HC6 AXL sing 91 n n 
C61 O62 AXL sing 92 n n 
C61 O63 AXL doub 93 n n 
O62 H62O AXL sing 94 n n 
N7 HN7 AXL sing 95 n n 
N8 C9 AXL sing 96 n n 
N8 HN8 AXL sing 97 n n 
C9 O91 AXL doub 98 n n 
C9 C10 AXL sing 99 n n 
C10 N11 AXL sing 100 n n 
C10 C12 AXL sing 101 n n 
C10 H10 AXL sing 102 n n 
N11 H111 AXL sing 103 n n 
N11 H112 AXL sing 104 n n 
C12 C13 AXL doub 105 n y 
C12 C17 AXL sing 106 n y 
C13 C14 AXL sing 107 n y 
C13 H13 AXL sing 108 n n 
C14 C15 AXL doub 109 n y 
C14 H14 AXL sing 110 n n 
C15 C16 AXL sing 111 n y 
C15 O18 AXL sing 112 n n 
C16 C17 AXL doub 113 n y 
C16 H16 AXL sing 114 n n 
C17 H17 AXL sing 115 n n 
O18 H18O AXL sing 116 n n 
#
_atom_sites.entry_id                     6I1F 
_atom_sites.fract_transf_matrix[1][1]    0.009414 
_atom_sites.fract_transf_matrix[1][2]    0.005435 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01087 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008435 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AXL A 1 701 701 AXL AXL . 
D 2 AXL B 1 701 701 AXL AXL . 
E 3 HOH A 1 801 58 HOH HOH . 
E 3 HOH A 2 802 46 HOH HOH . 
E 3 HOH A 3 803 113 HOH HOH . 
E 3 HOH A 4 804 91 HOH HOH . 
E 3 HOH A 5 805 35 HOH HOH . 
E 3 HOH A 6 806 21 HOH HOH . 
E 3 HOH A 7 807 41 HOH HOH . 
E 3 HOH A 8 808 116 HOH HOH . 
E 3 HOH A 9 809 55 HOH HOH . 
E 3 HOH A 10 810 34 HOH HOH . 
E 3 HOH A 11 811 57 HOH HOH . 
E 3 HOH A 12 812 101 HOH HOH . 
E 3 HOH A 13 813 59 HOH HOH . 
E 3 HOH A 14 814 71 HOH HOH . 
E 3 HOH A 15 815 7 HOH HOH . 
E 3 HOH A 16 816 79 HOH HOH . 
E 3 HOH A 17 817 25 HOH HOH . 
E 3 HOH A 18 818 63 HOH HOH . 
E 3 HOH A 19 819 8 HOH HOH . 
E 3 HOH A 20 820 126 HOH HOH . 
E 3 HOH A 21 821 17 HOH HOH . 
E 3 HOH A 22 822 74 HOH HOH . 
E 3 HOH A 23 823 36 HOH HOH . 
E 3 HOH A 24 824 60 HOH HOH . 
E 3 HOH A 25 825 22 HOH HOH . 
E 3 HOH A 26 826 110 HOH HOH . 
E 3 HOH A 27 827 87 HOH HOH . 
E 3 HOH A 28 828 40 HOH HOH . 
E 3 HOH A 29 829 69 HOH HOH . 
E 3 HOH A 30 830 51 HOH HOH . 
E 3 HOH A 31 831 120 HOH HOH . 
E 3 HOH A 32 832 102 HOH HOH . 
E 3 HOH A 33 833 3 HOH HOH . 
E 3 HOH A 34 834 65 HOH HOH . 
E 3 HOH A 35 835 29 HOH HOH . 
E 3 HOH A 36 836 14 HOH HOH . 
E 3 HOH A 37 837 130 HOH HOH . 
E 3 HOH A 38 838 20 HOH HOH . 
E 3 HOH A 39 839 93 HOH HOH . 
E 3 HOH A 40 840 111 HOH HOH . 
E 3 HOH A 41 841 48 HOH HOH . 
E 3 HOH A 42 842 45 HOH HOH . 
E 3 HOH A 43 843 104 HOH HOH . 
E 3 HOH A 44 844 49 HOH HOH . 
E 3 HOH A 45 845 54 HOH HOH . 
E 3 HOH A 46 846 30 HOH HOH . 
E 3 HOH A 47 847 106 HOH HOH . 
E 3 HOH A 48 848 123 HOH HOH . 
E 3 HOH A 49 849 92 HOH HOH . 
E 3 HOH A 50 850 26 HOH HOH . 
E 3 HOH A 51 851 15 HOH HOH . 
E 3 HOH A 52 852 16 HOH HOH . 
E 3 HOH A 53 853 6 HOH HOH . 
E 3 HOH A 54 854 27 HOH HOH . 
E 3 HOH A 55 855 2 HOH HOH . 
E 3 HOH A 56 856 103 HOH HOH . 
E 3 HOH A 57 857 80 HOH HOH . 
E 3 HOH A 58 858 28 HOH HOH . 
E 3 HOH A 59 859 68 HOH HOH . 
E 3 HOH A 60 860 24 HOH HOH . 
E 3 HOH A 61 861 19 HOH HOH . 
E 3 HOH A 62 862 33 HOH HOH . 
E 3 HOH A 63 863 108 HOH HOH . 
E 3 HOH A 64 864 37 HOH HOH . 
E 3 HOH A 65 865 107 HOH HOH . 
E 3 HOH A 66 866 112 HOH HOH . 
E 3 HOH A 67 867 121 HOH HOH . 
F 3 HOH B 1 801 81 HOH HOH . 
F 3 HOH B 2 802 97 HOH HOH . 
F 3 HOH B 3 803 83 HOH HOH . 
F 3 HOH B 4 804 98 HOH HOH . 
F 3 HOH B 5 805 105 HOH HOH . 
F 3 HOH B 6 806 66 HOH HOH . 
F 3 HOH B 7 807 109 HOH HOH . 
F 3 HOH B 8 808 64 HOH HOH . 
F 3 HOH B 9 809 62 HOH HOH . 
F 3 HOH B 10 810 12 HOH HOH . 
F 3 HOH B 11 811 52 HOH HOH . 
F 3 HOH B 12 812 85 HOH HOH . 
F 3 HOH B 13 813 70 HOH HOH . 
F 3 HOH B 14 814 117 HOH HOH . 
F 3 HOH B 15 815 119 HOH HOH . 
F 3 HOH B 16 816 53 HOH HOH . 
F 3 HOH B 17 817 50 HOH HOH . 
F 3 HOH B 18 818 78 HOH HOH . 
F 3 HOH B 19 819 124 HOH HOH . 
F 3 HOH B 20 820 72 HOH HOH . 
F 3 HOH B 21 821 38 HOH HOH . 
F 3 HOH B 22 822 84 HOH HOH . 
F 3 HOH B 23 823 23 HOH HOH . 
F 3 HOH B 24 824 44 HOH HOH . 
F 3 HOH B 25 825 88 HOH HOH . 
F 3 HOH B 26 826 39 HOH HOH . 
F 3 HOH B 27 827 100 HOH HOH . 
F 3 HOH B 28 828 95 HOH HOH . 
F 3 HOH B 29 829 122 HOH HOH . 
F 3 HOH B 30 830 43 HOH HOH . 
F 3 HOH B 31 831 61 HOH HOH . 
F 3 HOH B 32 832 125 HOH HOH . 
F 3 HOH B 33 833 127 HOH HOH . 
F 3 HOH B 34 834 73 HOH HOH . 
F 3 HOH B 35 835 32 HOH HOH . 
F 3 HOH B 36 836 96 HOH HOH . 
F 3 HOH B 37 837 75 HOH HOH . 
F 3 HOH B 38 838 82 HOH HOH . 
F 3 HOH B 39 839 47 HOH HOH . 
F 3 HOH B 40 840 67 HOH HOH . 
F 3 HOH B 41 841 18 HOH HOH . 
F 3 HOH B 42 842 99 HOH HOH . 
F 3 HOH B 43 843 90 HOH HOH . 
F 3 HOH B 44 844 89 HOH HOH . 
F 3 HOH B 45 845 13 HOH HOH . 
F 3 HOH B 46 846 94 HOH HOH . 
F 3 HOH B 47 847 77 HOH HOH . 
F 3 HOH B 48 848 115 HOH HOH . 
F 3 HOH B 49 849 31 HOH HOH . 
F 3 HOH B 50 850 1 HOH HOH . 
F 3 HOH B 51 851 114 HOH HOH . 
F 3 HOH B 52 852 76 HOH HOH . 
F 3 HOH B 53 853 129 HOH HOH . 
F 3 HOH B 54 854 128 HOH HOH . 
F 3 HOH B 55 855 10 HOH HOH . 
F 3 HOH B 56 856 5 HOH HOH . 
F 3 HOH B 57 857 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AXL . . . C 2 38.64 -25.994 20.486 1 23.94 ? C1 AXL 701 A 1 
HETATM 2 O O1 AXL . . . C 2 38.651 -25.93 19.259 1 23.14 ? O1 AXL 701 A 1 
HETATM 3 C C2 AXL . . . C 2 38 -27.128 21.237 1 23.99 ? C2 AXL 701 A 1 
HETATM 4 C C3 AXL . . . C 2 39.003 -28.277 21.458 1 23.85 ? C3 AXL 701 A 1 
HETATM 5 S S4 AXL . . . C 2 38.328 -29.917 21.373 1 24.19 ? S4 AXL 701 A 1 
HETATM 6 C C5 AXL . . . C 2 39.078 -30.453 19.872 1 23.38 ? C5 AXL 701 A 1 
HETATM 7 C C51 AXL . . . C 2 40.155 -31.496 20.156 1 22.55 ? C51 AXL 701 A 1 
HETATM 8 C C52 AXL . . . C 2 38.004 -31.022 18.954 1 22.49 ? C52 AXL 701 A 1 
HETATM 9 C C6 AXL . . . C 2 39.605 -29.126 19.298 1 23.17 ? C6 AXL 701 A 1 
HETATM 10 C C61 AXL . . . C 2 40.635 -29.22 18.199 1 22.95 ? C61 AXL 701 A 1 
HETATM 11 O O62 AXL . . . C 2 41.857 -29.217 18.492 1 21.56 ? O62 AXL 701 A 1 
HETATM 12 O O63 AXL . . . C 2 40.186 -29.26 17.03 1 21.78 ? O63 AXL 701 A 1 
HETATM 13 N N7 AXL . . . C 2 40.057 -28.247 20.409 1 23.61 ? N7 AXL 701 A 1 
HETATM 14 N N8 AXL . . . C 2 36.81 -27.486 20.496 1 24.71 ? N8 AXL 701 A 1 
HETATM 15 C C9 AXL . . . C 2 35.665 -27.597 21.14 1 25.04 ? C9 AXL 701 A 1 
HETATM 16 O O91 AXL . . . C 2 35.611 -27.669 22.364 1 24.7 ? O91 AXL 701 A 1 
HETATM 17 C C10 AXL . . . C 2 34.434 -27.642 20.289 1 25.05 ? C10 AXL 701 A 1 
HETATM 18 N N11 AXL . . . C 2 33.331 -27.122 21.124 1 25.49 ? N11 AXL 701 A 1 
HETATM 19 C C12 AXL . . . C 2 34.173 -29.037 19.819 1 25.37 ? C12 AXL 701 A 1 
HETATM 20 C C13 AXL . . . C 2 33.524 -29.318 18.611 1 25.29 ? C13 AXL 701 A 1 
HETATM 21 C C14 AXL . . . C 2 33.312 -30.642 18.213 1 25.52 ? C14 AXL 701 A 1 
HETATM 22 C C15 AXL . . . C 2 33.751 -31.698 19.031 1 27.02 ? C15 AXL 701 A 1 
HETATM 23 C C16 AXL . . . C 2 34.385 -31.418 20.237 1 26.45 ? C16 AXL 701 A 1 
HETATM 24 C C17 AXL . . . C 2 34.587 -30.099 20.621 1 25.91 ? C17 AXL 701 A 1 
HETATM 25 O O18 AXL . . . C 2 33.567 -33.025 18.703 1 27.78 ? O18 AXL 701 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           220 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#