data_6I1H # _model_server_result.job_id '_B2KT95mrhR0jdSUbgJ3Xg' _model_server_result.datetime_utc '2024-11-04 23:45:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6i1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6I1H # _exptl.entry_id 6I1H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.478 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6I1H _cell.length_a 112.566 _cell.length_b 112.566 _cell.length_c 118.501 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H27 N3 O5 S' _chem_comp.formula_weight 385.478 _chem_comp.id MER _chem_comp.mon_nstd_flag . _chem_comp.name '(4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Meropenem, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O6 MER doub 205 n n C1 C3 MER sing 206 n n C1 H1 MER sing 207 n n C5 C2 MER doub 208 n n C2 C18 MER sing 209 n n C2 S14 MER sing 210 n n C4 C3 MER sing 211 n n C3 C7 MER sing 212 n n C3 H3 MER sing 213 n n N10 C4 MER sing 214 n n C4 C18 MER sing 215 n n C4 H4 MER sing 216 n n C11 C5 MER sing 217 n n N10 C5 MER sing 218 n n O8 C7 MER sing 219 n n C7 C9 MER sing 220 n n C7 H7 MER sing 221 n n O8 HO8 MER sing 222 n n C9 H9 MER sing 223 n n C9 H9A MER sing 224 n n C9 H9B MER sing 225 n n N10 HN10 MER sing 226 n n O13 C11 MER doub 227 n n C11 O12 MER sing 228 n n O12 HO12 MER sing 229 n n S14 C15 MER sing 230 n n C16 C15 MER sing 231 n n C15 C21 MER sing 232 n n C15 H15 MER sing 233 n n C16 C17 MER sing 234 n n C16 H16 MER sing 235 n n C16 H16A MER sing 236 n n C22 C17 MER sing 237 n n C17 N19 MER sing 238 n n C17 H17 MER sing 239 n n C18 C20 MER sing 240 n n C18 H18 MER sing 241 n n N19 C21 MER sing 242 n n N19 HN19 MER sing 243 n n C20 H20 MER sing 244 n n C20 H20A MER sing 245 n n C20 H20B MER sing 246 n n C21 H21 MER sing 247 n n C21 H21A MER sing 248 n n N23 C22 MER sing 249 n n O24 C22 MER doub 250 n n C25 N23 MER sing 251 n n N23 C26 MER sing 252 n n C25 H25 MER sing 253 n n C25 H25A MER sing 254 n n C25 H25B MER sing 255 n n C26 H26 MER sing 256 n n C26 H26A MER sing 257 n n C26 H26B MER sing 258 n n # _atom_sites.entry_id 6I1H _atom_sites.fract_transf_matrix[1][1] 0.008884 _atom_sites.fract_transf_matrix[1][2] 0.005129 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008439 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MER A 1 701 701 MER MER . D 2 MER B 1 701 701 MER MER . E 3 HOH A 1 801 119 HOH HOH . E 3 HOH A 2 802 155 HOH HOH . E 3 HOH A 3 803 44 HOH HOH . E 3 HOH A 4 804 160 HOH HOH . E 3 HOH A 5 805 151 HOH HOH . E 3 HOH A 6 806 157 HOH HOH . E 3 HOH A 7 807 6 HOH HOH . E 3 HOH A 8 808 88 HOH HOH . E 3 HOH A 9 809 103 HOH HOH . E 3 HOH A 10 810 152 HOH HOH . E 3 HOH A 11 811 8 HOH HOH . E 3 HOH A 12 812 69 HOH HOH . E 3 HOH A 13 813 86 HOH HOH . E 3 HOH A 14 814 70 HOH HOH . E 3 HOH A 15 815 19 HOH HOH . E 3 HOH A 16 816 32 HOH HOH . E 3 HOH A 17 817 72 HOH HOH . E 3 HOH A 18 818 166 HOH HOH . E 3 HOH A 19 819 89 HOH HOH . E 3 HOH A 20 820 7 HOH HOH . E 3 HOH A 21 821 177 HOH HOH . E 3 HOH A 22 822 125 HOH HOH . E 3 HOH A 23 823 52 HOH HOH . E 3 HOH A 24 824 97 HOH HOH . E 3 HOH A 25 825 33 HOH HOH . E 3 HOH A 26 826 105 HOH HOH . E 3 HOH A 27 827 178 HOH HOH . E 3 HOH A 28 828 40 HOH HOH . E 3 HOH A 29 829 137 HOH HOH . E 3 HOH A 30 830 123 HOH HOH . E 3 HOH A 31 831 67 HOH HOH . E 3 HOH A 32 832 134 HOH HOH . E 3 HOH A 33 833 120 HOH HOH . E 3 HOH A 34 834 36 HOH HOH . E 3 HOH A 35 835 18 HOH HOH . E 3 HOH A 36 836 26 HOH HOH . E 3 HOH A 37 837 13 HOH HOH . E 3 HOH A 38 838 45 HOH HOH . E 3 HOH A 39 839 128 HOH HOH . E 3 HOH A 40 840 66 HOH HOH . E 3 HOH A 41 841 94 HOH HOH . E 3 HOH A 42 842 98 HOH HOH . E 3 HOH A 43 843 56 HOH HOH . E 3 HOH A 44 844 15 HOH HOH . E 3 HOH A 45 845 182 HOH HOH . E 3 HOH A 46 846 63 HOH HOH . E 3 HOH A 47 847 132 HOH HOH . E 3 HOH A 48 848 58 HOH HOH . E 3 HOH A 49 849 47 HOH HOH . E 3 HOH A 50 850 38 HOH HOH . E 3 HOH A 51 851 158 HOH HOH . E 3 HOH A 52 852 22 HOH HOH . E 3 HOH A 53 853 183 HOH HOH . E 3 HOH A 54 854 173 HOH HOH . E 3 HOH A 55 855 83 HOH HOH . E 3 HOH A 56 856 17 HOH HOH . E 3 HOH A 57 857 43 HOH HOH . E 3 HOH A 58 858 74 HOH HOH . E 3 HOH A 59 859 24 HOH HOH . E 3 HOH A 60 860 68 HOH HOH . E 3 HOH A 61 861 27 HOH HOH . E 3 HOH A 62 862 79 HOH HOH . E 3 HOH A 63 863 171 HOH HOH . E 3 HOH A 64 864 53 HOH HOH . E 3 HOH A 65 865 57 HOH HOH . E 3 HOH A 66 866 39 HOH HOH . E 3 HOH A 67 867 174 HOH HOH . E 3 HOH A 68 868 16 HOH HOH . E 3 HOH A 69 869 4 HOH HOH . E 3 HOH A 70 870 71 HOH HOH . E 3 HOH A 71 871 55 HOH HOH . E 3 HOH A 72 872 59 HOH HOH . E 3 HOH A 73 873 104 HOH HOH . E 3 HOH A 74 874 64 HOH HOH . E 3 HOH A 75 875 48 HOH HOH . E 3 HOH A 76 876 73 HOH HOH . E 3 HOH A 77 877 31 HOH HOH . E 3 HOH A 78 878 10 HOH HOH . E 3 HOH A 79 879 127 HOH HOH . E 3 HOH A 80 880 54 HOH HOH . E 3 HOH A 81 881 65 HOH HOH . E 3 HOH A 82 882 91 HOH HOH . E 3 HOH A 83 883 136 HOH HOH . E 3 HOH A 84 884 5 HOH HOH . E 3 HOH A 85 885 176 HOH HOH . E 3 HOH A 86 886 130 HOH HOH . E 3 HOH A 87 887 102 HOH HOH . E 3 HOH A 88 888 9 HOH HOH . E 3 HOH A 89 889 11 HOH HOH . E 3 HOH A 90 890 21 HOH HOH . E 3 HOH A 91 891 175 HOH HOH . E 3 HOH A 92 892 143 HOH HOH . E 3 HOH A 93 893 150 HOH HOH . E 3 HOH A 94 894 167 HOH HOH . E 3 HOH A 95 895 131 HOH HOH . E 3 HOH A 96 896 133 HOH HOH . E 3 HOH A 97 897 60 HOH HOH . E 3 HOH A 98 898 115 HOH HOH . E 3 HOH A 99 899 49 HOH HOH . E 3 HOH A 100 900 77 HOH HOH . E 3 HOH A 101 901 78 HOH HOH . E 3 HOH A 102 902 168 HOH HOH . E 3 HOH A 103 903 162 HOH HOH . E 3 HOH A 104 904 1 HOH HOH . E 3 HOH A 105 905 169 HOH HOH . E 3 HOH A 106 906 117 HOH HOH . E 3 HOH A 107 907 129 HOH HOH . E 3 HOH A 108 908 179 HOH HOH . E 3 HOH A 109 909 75 HOH HOH . E 3 HOH A 110 910 61 HOH HOH . E 3 HOH A 111 911 100 HOH HOH . E 3 HOH A 112 912 25 HOH HOH . E 3 HOH A 113 913 184 HOH HOH . E 3 HOH A 114 914 28 HOH HOH . E 3 HOH A 115 915 51 HOH HOH . E 3 HOH A 116 916 161 HOH HOH . E 3 HOH A 117 917 114 HOH HOH . E 3 HOH A 118 918 149 HOH HOH . E 3 HOH A 119 919 95 HOH HOH . F 3 HOH B 1 801 165 HOH HOH . F 3 HOH B 2 802 163 HOH HOH . F 3 HOH B 3 803 181 HOH HOH . F 3 HOH B 4 804 112 HOH HOH . F 3 HOH B 5 805 29 HOH HOH . F 3 HOH B 6 806 164 HOH HOH . F 3 HOH B 7 807 80 HOH HOH . F 3 HOH B 8 808 87 HOH HOH . F 3 HOH B 9 809 146 HOH HOH . F 3 HOH B 10 810 113 HOH HOH . F 3 HOH B 11 811 84 HOH HOH . F 3 HOH B 12 812 101 HOH HOH . F 3 HOH B 13 813 122 HOH HOH . F 3 HOH B 14 814 107 HOH HOH . F 3 HOH B 15 815 81 HOH HOH . F 3 HOH B 16 816 41 HOH HOH . F 3 HOH B 17 817 110 HOH HOH . F 3 HOH B 18 818 109 HOH HOH . F 3 HOH B 19 819 92 HOH HOH . F 3 HOH B 20 820 34 HOH HOH . F 3 HOH B 21 821 159 HOH HOH . F 3 HOH B 22 822 121 HOH HOH . F 3 HOH B 23 823 20 HOH HOH . F 3 HOH B 24 824 111 HOH HOH . F 3 HOH B 25 825 82 HOH HOH . F 3 HOH B 26 826 23 HOH HOH . F 3 HOH B 27 827 99 HOH HOH . F 3 HOH B 28 828 147 HOH HOH . F 3 HOH B 29 829 144 HOH HOH . F 3 HOH B 30 830 126 HOH HOH . F 3 HOH B 31 831 138 HOH HOH . F 3 HOH B 32 832 35 HOH HOH . F 3 HOH B 33 833 108 HOH HOH . F 3 HOH B 34 834 118 HOH HOH . F 3 HOH B 35 835 30 HOH HOH . F 3 HOH B 36 836 85 HOH HOH . F 3 HOH B 37 837 46 HOH HOH . F 3 HOH B 38 838 154 HOH HOH . F 3 HOH B 39 839 148 HOH HOH . F 3 HOH B 40 840 185 HOH HOH . F 3 HOH B 41 841 124 HOH HOH . F 3 HOH B 42 842 106 HOH HOH . F 3 HOH B 43 843 135 HOH HOH . F 3 HOH B 44 844 145 HOH HOH . F 3 HOH B 45 845 3 HOH HOH . F 3 HOH B 46 846 50 HOH HOH . F 3 HOH B 47 847 142 HOH HOH . F 3 HOH B 48 848 37 HOH HOH . F 3 HOH B 49 849 156 HOH HOH . F 3 HOH B 50 850 2 HOH HOH . F 3 HOH B 51 851 170 HOH HOH . F 3 HOH B 52 852 153 HOH HOH . F 3 HOH B 53 853 96 HOH HOH . F 3 HOH B 54 854 93 HOH HOH . F 3 HOH B 55 855 172 HOH HOH . F 3 HOH B 56 856 180 HOH HOH . F 3 HOH B 57 857 140 HOH HOH . F 3 HOH B 58 858 141 HOH HOH . F 3 HOH B 59 859 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MER . . . C 2 -2.32 -50.629 38.586 1 13.76 ? C1 MER 701 A 1 HETATM 2 C C2 MER . . . C 2 -5.865 -52.247 37.646 1 15.11 ? C2 MER 701 A 1 HETATM 3 C C3 MER . . . C 2 -3.684 -50.275 39.129 1 14.29 ? C3 MER 701 A 1 HETATM 4 C C4 MER . . . C 2 -4.464 -51.567 39.422 1 14.3 ? C4 MER 701 A 1 HETATM 5 C C5 MER . . . C 2 -4.668 -52.866 37.527 1 14.85 ? C5 MER 701 A 1 HETATM 6 O O6 MER . . . C 2 -1.942 -50.488 37.437 1 13.47 ? O6 MER 701 A 1 HETATM 7 C C7 MER . . . C 2 -3.434 -49.417 40.377 1 14.05 ? C7 MER 701 A 1 HETATM 8 O O8 MER . . . C 2 -4.661 -48.816 40.773 1 14.55 ? O8 MER 701 A 1 HETATM 9 C C9 MER . . . C 2 -2.42 -48.306 40.115 1 13.86 ? C9 MER 701 A 1 HETATM 10 N N10 MER . . . C 2 -3.9 -52.617 38.595 1 14.5 ? N10 MER 701 A 1 HETATM 11 C C11 MER . . . C 2 -4.176 -53.732 36.448 1 14.59 ? C11 MER 701 A 1 HETATM 12 O O12 MER . . . C 2 -4.388 -53.456 35.247 1 14.79 ? O12 MER 701 A 1 HETATM 13 O O13 MER . . . C 2 -3.523 -54.753 36.751 1 14.05 ? O13 MER 701 A 1 HETATM 14 S S14 MER . . . C 2 -7.155 -52.205 36.563 1 16.62 ? S14 MER 701 A 1 HETATM 15 C C15 MER . . . C 2 -7.485 -53.844 36.011 1 16.37 ? C15 MER 701 A 1 HETATM 16 C C16 MER . . . C 2 -7.42 -54.775 37.195 1 16.54 ? C16 MER 701 A 1 HETATM 17 C C17 MER . . . C 2 -8.842 -54.922 37.719 1 16.73 ? C17 MER 701 A 1 HETATM 18 C C18 MER . . . C 2 -5.942 -51.56 38.983 1 14.71 ? C18 MER 701 A 1 HETATM 19 N N19 MER . . . C 2 -9.719 -54.589 36.579 1 16.74 ? N19 MER 701 A 1 HETATM 20 C C20 MER . . . C 2 -6.655 -50.208 38.871 1 14.63 ? C20 MER 701 A 1 HETATM 21 C C21 MER . . . C 2 -8.918 -53.948 35.52 1 16.94 ? C21 MER 701 A 1 HETATM 22 C C22 MER . . . C 2 -9.124 -53.994 38.886 1 17.14 ? C22 MER 701 A 1 HETATM 23 N N23 MER . . . C 2 -8.505 -54.194 40.075 1 17 ? N23 MER 701 A 1 HETATM 24 O O24 MER . . . C 2 -9.925 -53.069 38.721 1 17.31 ? O24 MER 701 A 1 HETATM 25 C C25 MER . . . C 2 -8.618 -53.253 41.182 1 17.03 ? C25 MER 701 A 1 HETATM 26 C C26 MER . . . C 2 -7.679 -55.347 40.398 1 16.42 ? C26 MER 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #